RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 DIAPH3Q9NSV4 1193 aa13.77□□□□□ -0.2
CCND1-201ENST00000227507 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.2
CCND1-201ENST00000227507 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.21
CCND1-201ENST00000227507 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
CCND1-201ENST00000227507 HMGB2P26583 209 aaKnown RBP13.77□□□□□ -0.21
CCND1-201ENST00000227507 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
CCND1-201ENST00000227507 FAM135BQ49AJ0 1406 aa13.77□□□□□ -0.21
CCND1-201ENST00000227507 CAMSAP1Q5T5Y3 1602 aa13.77□□□□□ -0.21
CCND1-201ENST00000227507 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCND1-201ENST00000227507 MYRIPQ8NFW9 859 aa13.77□□□□□ -0.21
CCND1-201ENST00000227507 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
CCND1-201ENST00000227507 ADGRB3O60242 1522 aa13.77□□□□□ -0.21
CCND1-201ENST00000227507 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
CCND1-201ENST00000227507 IP6K1Q92551 441 aa13.76□□□□□ -0.21
CCND1-201ENST00000227507 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
CCND1-201ENST00000227507 GNAI3P08754 354 aa13.76□□□□□ -0.21
CCND1-201ENST00000227507 E9PCH4 1651 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 TRPM1Q7Z4N2 1603 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
CCND1-201ENST00000227507 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 ZBTB22O15209 634 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 STARD3NLO95772 234 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 CNPY4Q8N129 248 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 VPS37CA5D8V6 355 aaPredicted RBP13.75□□□□□ -0.21
CCND1-201ENST00000227507 HSP90B1P14625 803 aaKnown RBP13.75□□□□□ -0.21
CCND1-201ENST00000227507 HOXC9P31274 260 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 PDLIM2Q96JY6 352 aa13.75□□□□□ -0.21
CCND1-201ENST00000227507 MYL6BP14649 208 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
CCND1-201ENST00000227507 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 ZCRB1Q8TBF4 217 aaKnown RBP13.74□□□□□ -0.21
CCND1-201ENST00000227507 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 SYNMO15061 1565 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.213e-10■□□□□ 10.8
CCND1-201ENST00000227507 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
CCND1-201ENST00000227507 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 PRIMPOLQ96LW4 560 aa13.74□□□□□ -0.21
CCND1-201ENST00000227507 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
CCND1-201ENST00000227507 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
CCND1-201ENST00000227507 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
CCND1-201ENST00000227507 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
CCND1-201ENST00000227507 ERICH4A6NGS2 130 aa13.73□□□□□ -0.21
CCND1-201ENST00000227507 HSP90AB4PQ58FF6 505 aa13.73□□□□□ -0.21
CCND1-201ENST00000227507 TRERF1Q96PN7 1200 aa13.73□□□□□ -0.21
CCND1-201ENST00000227507 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
CCND1-201ENST00000227507 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
CCND1-201ENST00000227507 ATP2B3Q16720 1220 aa13.72□□□□□ -0.21
CCND1-201ENST00000227507 EYA1Q99502 592 aa13.72□□□□□ -0.21
CCND1-201ENST00000227507 BTG4Q9NY30 223 aa13.72□□□□□ -0.21
CCND1-201ENST00000227507 IL2RBP14784 551 aa13.72□□□□□ -0.21
CCND1-201ENST00000227507 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
CCND1-201ENST00000227507 SBNO1A3KN83 1393 aa13.72□□□□□ -0.21
CCND1-201ENST00000227507 VAMP4O75379 141 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 CAMK4Q16566 473 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 CNPY2Q9Y2B0 182 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 CCT4P50991 539 aaKnown RBP13.71□□□□□ -0.21
CCND1-201ENST00000227507 DDB1Q16531 1140 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 C8orf58Q8NAV2 365 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
CCND1-201ENST00000227507 KDM5AP29375 1690 aaKnown RBP13.71□□□□□ -0.21
CCND1-201ENST00000227507 KIF20AO95235 890 aa13.71□□□□□ -0.22
CCND1-201ENST00000227507 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.22
CCND1-201ENST00000227507 PHACTR3Q96KR7 559 aa13.71□□□□□ -0.22
CCND1-201ENST00000227507 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.22
CCND1-201ENST00000227507 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.22
CCND1-201ENST00000227507 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.22
CCND1-201ENST00000227507 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.22
CCND1-201ENST00000227507 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.22
CCND1-201ENST00000227507 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.22
CCND1-201ENST00000227507 SMC3Q9UQE7 1217 aa13.71□□□□□ -0.22
CCND1-201ENST00000227507 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 TMEM51Q9NW97 253 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 PTPRMP28827 1452 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 ZC3H13Q5T200 1668 aaKnown RBP13.7□□□□□ -0.22
CCND1-201ENST00000227507 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 FAM184AQ8NB25 1140 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 TRIM5Q9C035 493 aa13.7□□□□□ -0.22
CCND1-201ENST00000227507 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
CCND1-201ENST00000227507 IFIT2P09913 472 aaKnown RBP13.69□□□□□ -0.22
CCND1-201ENST00000227507 TEX2Q8IWB9 1127 aa13.69□□□□□ -0.22
CCND1-201ENST00000227507 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
CCND1-201ENST00000227507 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
CCND1-201ENST00000227507 TPD52L1Q16890 204 aaPredicted RBP13.68□□□□□ -0.22
CCND1-201ENST00000227507 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCND1-201ENST00000227507 V9GYY5 206 aaPredicted RBP13.68□□□□□ -0.22
CCND1-201ENST00000227507 AK9Q5TCS8 1911 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 F6X3S4 739 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 CCDC183Q5T5S1 534 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 MEIS3Q99687 375 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 IL16Q14005 1332 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
CCND1-201ENST00000227507 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms