RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 SBF1O95248 1867 aa15.92■□□□□ 0.14
SNU13-201ENST00000215956 E9PSI1 815 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 GYS1P13807 737 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 HTRA3P83110 453 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 C9orf131Q5VYM1 1079 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 ARHGEF1Q92888 912 aaKnown RBP15.91■□□□□ 0.14
SNU13-201ENST00000215956 KLRG1Q96E93 195 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 KCPQ6ZWJ8 1503 aa15.91■□□□□ 0.14
SNU13-201ENST00000215956 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
SNU13-201ENST00000215956 RFC4P35249 363 aa15.9■□□□□ 0.14
SNU13-201ENST00000215956 FSTL1Q12841 308 aa15.9■□□□□ 0.14
SNU13-201ENST00000215956 RC3H1Q5TC82 1133 aaKnown RBP15.9■□□□□ 0.14
SNU13-201ENST00000215956 WDR63Q8IWG1 891 aa15.9■□□□□ 0.14
SNU13-201ENST00000215956 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
SNU13-201ENST00000215956 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
SNU13-201ENST00000215956 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
SNU13-201ENST00000215956 KCNA3P22001 575 aa15.89■□□□□ 0.13
SNU13-201ENST00000215956 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
SNU13-201ENST00000215956 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
SNU13-201ENST00000215956 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
SNU13-201ENST00000215956 KDM2BQ8NHM5 1336 aa15.88■□□□□ 0.13
SNU13-201ENST00000215956 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
SNU13-201ENST00000215956 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
SNU13-201ENST00000215956 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
SNU13-201ENST00000215956 PIM2Q9P1W9 311 aa15.87■□□□□ 0.13
SNU13-201ENST00000215956 WWC1Q8IX03 1113 aa15.86■□□□□ 0.13
SNU13-201ENST00000215956 IL13P35225 146 aa15.86■□□□□ 0.13
SNU13-201ENST00000215956 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
SNU13-201ENST00000215956 CDCA7LQ96GN5 454 aa15.86■□□□□ 0.13
SNU13-201ENST00000215956 RNF181Q9P0P0 153 aa15.86■□□□□ 0.13
SNU13-201ENST00000215956 KDM6AO15550 1401 aaPredicted RBP15.85■□□□□ 0.13
SNU13-201ENST00000215956 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
SNU13-201ENST00000215956 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
SNU13-201ENST00000215956 DUSP27Q5VZP5 1158 aa15.85■□□□□ 0.13
SNU13-201ENST00000215956 PLEKHF1Q96S99 279 aa15.85■□□□□ 0.13
SNU13-201ENST00000215956 TJP1Q07157 1748 aa15.84■□□□□ 0.13
SNU13-201ENST00000215956 TRMT2AQ8IZ69 625 aaKnown RBP15.84■□□□□ 0.13
SNU13-201ENST00000215956 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
SNU13-201ENST00000215956 RRAGCQ9HB90 399 aa15.84■□□□□ 0.13
SNU13-201ENST00000215956 CAPN15O75808 1086 aa15.83■□□□□ 0.13
SNU13-201ENST00000215956 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.83■□□□□ 0.13
SNU13-201ENST00000215956 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
SNU13-201ENST00000215956 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.12
SNU13-201ENST00000215956 DDR1Q08345 913 aa15.83■□□□□ 0.12
SNU13-201ENST00000215956 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
SNU13-201ENST00000215956 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
SNU13-201ENST00000215956 SRP68Q9UHB9 627 aaKnown RBP15.83■□□□□ 0.12
SNU13-201ENST00000215956 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
SNU13-201ENST00000215956 ADAMTS7Q9UKP4 1686 aa15.82■□□□□ 0.12
SNU13-201ENST00000215956 CRKLP46109 303 aaKnown RBP15.82■□□□□ 0.12
SNU13-201ENST00000215956 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
SNU13-201ENST00000215956 CABP4P57796 275 aa15.82■□□□□ 0.12
SNU13-201ENST00000215956 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
SNU13-201ENST00000215956 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
SNU13-201ENST00000215956 IL16Q14005 1332 aa15.82■□□□□ 0.12
SNU13-201ENST00000215956 AFDNP55196 1824 aaKnown RBP15.81■□□□□ 0.12
SNU13-201ENST00000215956 CCDC88AQ3V6T2 1871 aa15.81■□□□□ 0.12
SNU13-201ENST00000215956 CHRNA5P30532 468 aa15.81■□□□□ 0.12
SNU13-201ENST00000215956 DLEC1Q9Y238 1755 aa15.8■□□□□ 0.12
SNU13-201ENST00000215956 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
SNU13-201ENST00000215956 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
SNU13-201ENST00000215956 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
SNU13-201ENST00000215956 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
SNU13-201ENST00000215956 PLEKHO1Q53GL0 409 aaPredicted RBP15.8■□□□□ 0.12
SNU13-201ENST00000215956 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
SNU13-201ENST00000215956 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
SNU13-201ENST00000215956 ZC3H4Q9UPT8 1303 aaKnown RBP15.79■□□□□ 0.12
SNU13-201ENST00000215956 SCN11AQ9UI33 1791 aa15.79■□□□□ 0.12
SNU13-201ENST00000215956 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
SNU13-201ENST00000215956 CT47B1P0C2W7 299 aaPredicted RBP15.79■□□□□ 0.12
SNU13-201ENST00000215956 PRELPP51888 382 aa15.79■□□□□ 0.12
SNU13-201ENST00000215956 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
SNU13-201ENST00000215956 RIPK4P57078 832 aa15.78■□□□□ 0.12
SNU13-201ENST00000215956 RASSF7Q02833 373 aa15.78■□□□□ 0.12
SNU13-201ENST00000215956 NFE2L2Q16236 605 aa15.78■□□□□ 0.12
SNU13-201ENST00000215956 AMOTQ4VCS5 1084 aa15.78■□□□□ 0.12
SNU13-201ENST00000215956 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.11
SNU13-201ENST00000215956 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
SNU13-201ENST00000215956 C1orf141Q5JVX7 400 aa15.76■□□□□ 0.11
SNU13-201ENST00000215956 TM4SF1P30408 202 aa15.76■□□□□ 0.11
SNU13-201ENST00000215956 NFATC2IPQ8NCF5 419 aa15.76■□□□□ 0.11
SNU13-201ENST00000215956 ZPR1O75312 459 aa15.75■□□□□ 0.11
SNU13-201ENST00000215956 HMOX1P09601 288 aa15.75■□□□□ 0.11
SNU13-201ENST00000215956 HSPA1AP0DMV8 641 aaKnown RBP15.75■□□□□ 0.11
SNU13-201ENST00000215956 HSPA1BP0DMV9 641 aaKnown RBP15.75■□□□□ 0.11
SNU13-201ENST00000215956 INTS5Q6P9B9 1019 aaKnown RBP15.75■□□□□ 0.11
SNU13-201ENST00000215956 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
SNU13-201ENST00000215956 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
SNU13-201ENST00000215956 LMNB1P20700 586 aa15.74■□□□□ 0.11
SNU13-201ENST00000215956 IRX6P78412 446 aaPredicted RBP15.74■□□□□ 0.11
SNU13-201ENST00000215956 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
SNU13-201ENST00000215956 AEBP1Q8IUX7 1158 aa15.73■□□□□ 0.11
SNU13-201ENST00000215956 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
SNU13-201ENST00000215956 DICER1Q9UPY3 1922 aaKnown RBP15.73■□□□□ 0.11
SNU13-201ENST00000215956 SULT6B1Q6IMI4 303 aa15.72■□□□□ 0.11
SNU13-201ENST00000215956 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
SNU13-201ENST00000215956 DNAJC10Q8IXB1 793 aa15.72■□□□□ 0.11
SNU13-201ENST00000215956 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms