RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 FCHSD2O94868 740 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 CPLX1O14810 134 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 TNNT1P13805 278 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 HS1BP3Q53T59 392 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 PSMA5P28066 241 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 IL2RBP14784 551 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 PDILTQ8N807 584 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 NOL7Q9UMY1 257 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 RXRBP28702 533 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 CKAP2LQ8IYA6 745 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 CWC15Q9P013 229 aaKnown RBP13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 SKIDA1Q1XH10 827 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 SYNE3Q6ZMZ3 975 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 TET3O43151 1660 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 CCT4P50991 539 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 AFF2P51816 1311 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 SDSP20132 328 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 TPM1P09493 284 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 ZMYM4Q5VZL5 1548 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 MX1P20591 662 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 HOXC9P31274 260 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 CHMP4CQ96CF2 233 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 FER1L4A9Z1Z3 1794 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 ME1P48163 572 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 SMAP1Q8IYB5 467 aaPredicted RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 UBXN4Q92575 508 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 EYA1Q99502 592 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 ZBTB40Q9NUA8 1239 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 TSC1Q92574 1164 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 F6X3S4 739 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 SETQ01105 290 aaPredicted RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 PPRC1Q5VV67 1664 aaKnown RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 PIK3R4Q99570 1358 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms