RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Snx25Q3ZT31 840 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Taok3Q8BYC6 898 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Riok1Q922Q2 567 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Ccdc171E9Q1U1 1324 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 PrphP15331 475 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Kif5bQ61768 963 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 IqceQ6PCQ0 778 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Bag4Q8CI61 457 aa19.03■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Wdhd1P59328 1117 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Plekhg5Q66T02 1073 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Egfem1Q8C088 590 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Gcc1Q9D4H2 778 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Prpf31Q8CCF0 499 aaKnown RBP19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Snw1Q9CSN1 536 aaKnown RBP19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Gm21663A0A0G2JE01 267 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 5031410I06RikE9Q4E0 267 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Gm5862K7N5V5 267 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Gm10220K7N660 267 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Cog6Q8R3I3 657 aa19.02■□□□□ 0.64
Ubr3-202ENSMUST00000112251 Prr16A3KMN5 304 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Usp35M0QWN7 1009 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cnga2Q62398 664 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Plekhh1Q80TI1 1356 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 ErmnQ5EBJ4 281 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Ssh1Q76I79 1042 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Clip2Q9Z0H8 1047 aa19.02■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Usp5P56399 858 aaKnown RBP19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Znf653Q6YND2 615 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Ppp1r9aH3BJD6 1292 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Sdc2P43407 202 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 VeztQ3ZK22 780 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 AidaQ8C4Q6 305 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Pof1bQ8K4L4 587 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Rapgef4Q9EQZ6 1011 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Abcc8B2RUS7 1588 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cfap100Q80VN0 613 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 SfpqQ8VIJ6 699 aaKnown RBP19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cib2Q9Z309 187 aa19.01■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Exoc6bA6H5Z3 810 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Dzip1lQ499E4 774 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cep135Q6P5D4 1140 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Nphp3Q7TNH6 1325 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Vgll3P85442 326 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Xab2Q9DCD2 855 aaKnown RBP19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 ImmtQ8CAQ8 757 aaKnown RBP19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Sil1Q9EPK6 465 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Epb41l3Q9WV92 929 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Samd15F6XZJ7 620 aa19■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Ppp1r14cQ8R4S0 164 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Nub1P54729 614 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Plcd3Q8K2J0 785 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 RpgrQ9R0X5 1001 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Atp2a2O55143 1044 aaKnown RBP18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Mcm6P97311 821 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Zscan10Q3URR7 782 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Suds3Q8BR65 328 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 DonsonQ9QXP4 560 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Ccdc12Q8R344 166 aaKnown RBP18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Zswim4Q8C7B8 1101 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Rrs1Q9CYH6 365 aaKnown RBP18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Kiaa1328Q6NZK5 612 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Ttc5Q99LG4 440 aa18.99■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Rad23bP54728 416 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Usp25P57080 1055 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Satb1Q60611 764 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Vps52Q8C754 723 aaKnown RBP18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Stmn2P55821 179 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Stmn4P63042 189 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Bin1O08539 588 aaKnown RBP18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Fez2Q6TYB5 348 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cdan1Q8CC12 1239 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cabp2Q9JLK4 216 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Gm21698A0A087WQP8 267 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Eftud2O08810 971 aaKnown RBP18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Strn4P58404 760 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Zbtb16Q3UQ17 673 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Jade3Q6IE82 823 aa18.98■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Klhl10Q9D5V2 608 aa18.97■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Evi5lH3BKQ3 813 aa18.97■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Kif5cP28738 956 aaKnown RBP18.97■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Cplx4Q80WM3 160 aa18.97■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Prkrip1Q9CWV6 186 aaKnown RBP18.97■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Clul1Q3ZRW6 464 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Tbc1d7Q9D0K0 293 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Fchsd2Q3USJ8 740 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Hvcn1Q3U2S8 269 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Flad1Q8R123 492 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Kif18aQ91WD7 886 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Nucb2P81117 420 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Atp2b3Q0VF55 1220 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Ccdc148Q6P5U8 527 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Rsrc1Q9DBU6 334 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Gbp6A0A0G2JDV3 611 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Gm43302L7N1X8 611 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Brf1Q8CFK2 676 aa18.96■□□□□ 0.63
Ubr3-202ENSMUST00000112251 Znf287Q9EQB9 759 aa18.96■□□□□ 0.62
Ubr3-202ENSMUST00000112251 Zmynd15Q8C0R7 736 aa18.95■□□□□ 0.62
Ubr3-202ENSMUST00000112251 NapbP28663 298 aa18.95■□□□□ 0.62
Ubr3-202ENSMUST00000112251 S100bP50114 92 aa18.95■□□□□ 0.62
Ubr3-202ENSMUST00000112251 Gtpbp10Q8K013 366 aa18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms