RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Flt4P35917 1363 aa30.17■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Tlr7P58681 1050 aa30.16■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Slc4a10Q5DTL9 1118 aa30.16■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 NexnQ7TPW1 607 aa30.16■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Smarce1O54941 411 aaKnown RBP30.16■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Gm10471E9Q1C7 252 aa30.15■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Rasa1E9PYG6 1038 aa30.14■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Map3k2Q61083 619 aa30.14■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Unc5clQ6R653 518 aa30.14■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Kif20aP97329 887 aa30.14■■■□□ 2.42
Cldnd1-201ENSMUST00000023426 Irf9Q61179 399 aa30.13■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Morc2aQ69ZX6 1030 aa30.13■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 ThemisQ8BGW0 636 aa30.13■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Pdzd9Q9D9M4 266 aa30.13■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Pde3bQ61409 1100 aa30.12■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Pmfbp1Q9WVQ0 1022 aa30.11■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 AU015836B2RUM3 263 aa30.11■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Filip1lQ6P6L0 1131 aa30.11■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 SympkQ80X82 1284 aa30.11■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 ImpactO55091 318 aa30.1■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 OptnQ8K3K8 584 aa30.1■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Dixdc1Q80Y83 711 aa30.1■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Tmx3Q8BXZ1 456 aa30.09■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Phlpp1Q8CHE4 1687 aa30.09■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Evi5lH3BKQ3 813 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Il4rP16382 810 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Ms4a2P20490 235 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Zdhhc9P59268 364 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Abcc4E9Q236 1325 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Brpf1B2RRD7 1212 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 Map3k13Q1HKZ5 959 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 KinQ8K339 391 aa30.08■■■□□ 2.41
Cldnd1-201ENSMUST00000023426 VgfQ0VGU4 617 aa30.07■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Ccdc7Q9D541 371 aa30.07■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Pcdh10E9PXQ7 1057 aa30.07■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Bcl2l13P59017 434 aa30.07■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Tgfb1i1Q62219 461 aa30.07■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Chmp7Q8R1T1 451 aa30.07■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 CrklP47941 303 aa30.06■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Card10P58660 1021 aa30.06■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Phkg2Q9DB30 406 aa30.06■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Strn4P58404 760 aa30.05■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Phactr2B1AVP0 632 aa30.05■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Ccdc155Q80VJ8 648 aa30.05■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Jakmip1Q8BVL9 626 aa30.05■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 GnpatP98192 678 aa30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Iqsec3Q3TES0 1195 aa30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Utp18Q5SSI6 552 aaKnown RBP30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 MlecQ6ZQI3 291 aaKnown RBP30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 St18Q80TY4 1045 aa30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Rad50P70388 1312 aa30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Gm21698A0A087WQP8 267 aa30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Gm21671G3UY31 267 aa30.04■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Gm45015A0A140LII9 184 aa30.03■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Gm18336A0A140LIU8 765 aa30.03■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 EvcP57680 1005 aa30.03■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Ddx19aQ61655 478 aaKnown RBP30.03■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Grm8P47743 908 aa30.02■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Ints3Q7TPD0 1041 aaKnown RBP30.02■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Gdpd2Q9ESM6 539 aa30.02■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Tns2Q8CGB6 1400 aa30.01■■■□□ 2.4
Cldnd1-201ENSMUST00000023426 Pdia6Q922R8 440 aaKnown RBP30.01■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Atf3Q60765 181 aa30.01■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Pdzrn3Q69ZS0 1063 aa30.01■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Col18a1P39061 1774 aa30■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Brf1Q8CFK2 676 aa30■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Tshz3Q8CGV9 1081 aa30■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Kiaa0232Q80U59 1396 aaKnown RBP30■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Taf5lQ91WQ5 589 aa29.99■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Ppfia1B2RXQ2 1266 aa29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Zbtb3Q91X45 518 aa29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Bicc1Q99MQ1 977 aaKnown RBP29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Glipr1l2Q9CQ35 332 aa29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 TefQ9JLC6 301 aa29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Ppm1mQ8BU27 406 aa29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Stk3Q9JI10 497 aa29.98■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Fam228bQ497Q6 232 aa29.97■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Zranb3Q6NZP1 1069 aa29.96■■■□□ 2.39
Cldnd1-201ENSMUST00000023426 Tnks1bp1P58871 1720 aa29.95■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Pa2g4P50580 394 aaKnown RBP29.95■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Top1mtQ8R4U6 593 aa29.95■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 4930572O03RikQ8C5Y0 211 aa29.94■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Ssfa2Q922B9 1252 aa29.94■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Mlh1Q9JK91 760 aa29.94■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Plcd4Q8K3R3 807 aa29.93■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Lmbr1lQ9D1E5 489 aa29.93■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Slx4ipQ9D7Y9 413 aa29.93■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Sf3a1Q8K4Z5 791 aaKnown RBP29.92■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Add2Q9QYB8 725 aa29.92■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Shank2Q80Z38 1476 aa29.9■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Slit1Q80TR4 1531 aa29.9■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 Cnnm1Q0GA42 951 aa29.89■■■□□ 2.38
Cldnd1-201ENSMUST00000023426 SlkO54988 1233 aa29.89■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Gjb2Q00977 226 aa29.89■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Ddx11Q6AXC6 880 aa29.89■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Ipo4Q8VI75 1082 aa29.89■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Ubr2Q6WKZ8 1755 aa29.88■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Ddx60E9PZQ1 1711 aa29.88■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Asic4Q7TNS7 539 aa29.88■■■□□ 2.37
Cldnd1-201ENSMUST00000023426 Elmsan1E9Q2I4 1089 aaKnown RBP29.87■■■□□ 2.37
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms