RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GFI1Q99684 422 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 HNRNPABQ99729 332 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 OLFM1Q99784 485 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CCT7Q99832 543 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ECSITQ9BQ95 431 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TMEM204Q9BSN7 226 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 HGH1Q9BTY7 390 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PITPNM3Q9BZ71 974 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CRNKL1Q9BZJ0 848 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PPIL3Q9H2H8 161 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLCO5A1Q9H2Y9 848 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 KCNK15Q9H427 330 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 RNF41Q9H4P4 317 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TLE6Q9H808 572 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 C10orf88Q9H8K7 445 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PLGRKTQ9HBL7 147 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 CHMP1AQ9HD42 196 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ATAD3AQ9NVI7 634 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 GID8Q9NWU2 228 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TAS2R14Q9NYV8 317 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBAP1Q9NZ09 502 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 GDE1Q9NZC3 331 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF224Q9NZL3 707 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 BCAP29Q9UHQ4 241 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 SIX4Q9UIU6 781 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ANAPC2Q9UJX6 822 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 MTUS1Q9ULD2 1270 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRAF3IP3Q9Y228 551 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM32AQ9Y421 112 aaKnown RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF711Q9Y462 761 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 C10orf71Q711Q0 1435 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 KIAA1551Q9HCM1 1747 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF142P52746 1687 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 SCN7AQ01118 1682 aa4.26□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBR2Q8IWV8 1755 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 C15orf38-AP3S2A0A0A6YYH1 394 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 TCRBV21S2A2A0A5A6 115 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM47DPA6NHR8 397 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 MIF4GDA9UHW6 222 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 H0YIN7 160 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 J3QR06 171 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CASQ2O14958 399 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 MCF2LO15068 1137 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 BUB1O43683 1085 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 TBCAO75347 108 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 MTRF1O75570 445 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CLPTM1O96005 669 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ACAA1P09110 424 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 LINC00271P0C7V0 271 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CALM1P0DP23 149 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CALM2P0DP24 149 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CALM3P0DP25 149 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 GJA1P17302 382 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CALML3P27482 149 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CRABP2P29373 138 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 HMOX2P30519 316 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 STIP1P31948 543 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CETN2P41208 172 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CTSCP53634 463 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLC18A1P54219 525 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 BRWD1-AS2P59051 145 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBXN2AP68543 259 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 NOP14P78316 857 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 LTBQ06643 244 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 SNTB1Q13884 538 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ANKRD20A4Q4UJ75 823 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM98BQ52LJ0 330 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRNP1Q6NT89 227 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 LRRC8BQ6P9F7 803 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ANO5Q75V66 913 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF534Q76KX8 674 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ATG9AQ7Z3C6 839 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 NET1Q7Z628 596 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ARPINQ7Z6K5 226 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 SFR1Q86XK3 245 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 GALNT13Q8IUC8 556 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZBED8Q8IZ13 594 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLC5A8Q8N695 610 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBL4BQ8N7F7 174 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 MINDY2Q8NBR6 621 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 BBOF1Q8ND07 529 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ICA1LQ8NDH6 482 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 SPATA22Q8NHS9 363 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 GDAP1Q8TB36 358 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 MGARPQ8TDB4 240 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 GRK7Q8WTQ7 553 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 LPGAT1Q92604 370 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 BORCS5Q969J3 196 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 PTERQ96BW5 349 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 EFHD2Q96C19 240 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 SGF29Q96ES7 293 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 PGAP3Q96FM1 320 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 MS4A14Q96JA4 679 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 RADILQ96JH8 1075 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 CFAP57Q96MR6 1250 aa4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF385AQ96PM9 386 aaKnown RBP4.25□□□□□ -1.73
HMGB1P16-201ENST00000447155 ERP44Q9BS26 406 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms