RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SYCP3Q8IZU3 236 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 THEM5Q8N1Q8 247 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM86AQ8N2M4 240 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ELMOD1Q8N336 334 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPATA6LQ8N4H0 392 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 XXYLT1Q8NBI6 393 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PRSS33Q8NF86 280 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 OR10T2Q8NGX3 314 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ITFG1Q8TB96 612 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 GOLGA5Q8TBA6 731 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 DEPDC1BQ8WUY9 529 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 SCFD1Q8WVM8 642 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 DNASE1L2Q92874 299 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PSMG2Q969U7 264 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 DHX58Q96C10 678 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 METTL2AQ96IZ6 378 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ADGRG7Q96K78 797 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEP295NLQ96MC4 621 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 OR1F2PQ96R84 312 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CSF3RQ99062 836 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PIP5K1AQ99755 562 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ACBD6Q9BR61 282 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CBWD1Q9BRT8 395 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM213AQ9BRX8 229 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 HAUS8Q9BT25 410 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 C1QTNF4Q9BXJ3 329 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 FGFBP2Q9BYJ0 223 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 PANK2Q9BZ23 570 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 NDST4Q9H3R1 872 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 HINT3Q9NQE9 182 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CNGB3Q9NQW8 809 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 HCFC1R1Q9NWW0 138 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 RBAKQ9NYW8 714 aaPredicted RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 TBC1D7Q9P0N9 293 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 DLGAP2Q9P1A6 1054 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ITGA11Q9UKX5 1188 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 ERVK-11Q9UQG0 969 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 AAR2Q9Y312 384 aaKnown RBP3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 YIPF1Q9Y548 306 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEP192Q8TEP8 1941 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 WDR87Q6ZQQ6 2873 aa3.56□□□□□ -1.84
CKS1BP3-201ENST00000600888 NUP205Q92621 2012 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PLXND1Q9Y4D7 1925 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAGEA13PA6NCF6 341 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 EIF3CLB5ME19 914 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PDXKO00764 312 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAPK13O15264 365 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PLRG1O43660 514 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 HUS1O60921 280 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM63AO94886 807 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 HAPLN1P10915 354 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 GLULP15104 373 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PFKFB1P16118 471 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 DDX5P17844 614 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PSMC3P17980 439 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 FCARP24071 287 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 NBL1P41271 181 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCR2P41597 374 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAGEA9P43362 315 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAGEA11P43364 429 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SYKP43405 635 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 RPS9P46781 194 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 LHX1P48742 406 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCR9P51686 369 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 AP3M2P53677 418 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ARPP19P56211 112 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MPP1Q00013 466 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TFAMQ00059 246 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MYL7Q01449 175 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 EEF1A2Q05639 463 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 FCHO2Q0JRZ9 810 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TWF1Q12792 350 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM115Q12893 351 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF155Q12901 538 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SNTA1Q13424 505 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 OLIG2Q13516 323 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 DCTN2Q13561 401 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 OASLQ15646 514 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SNRNP35Q16560 246 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCNG2Q16589 344 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TSTQ16762 297 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 KNOP1Q1ED39 458 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 EIF2S3LQ2VIR3 472 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CFAP221Q4G0U5 840 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 C6orf141Q5SZD1 244 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 WSCD1Q658N2 575 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 WDR73Q6P4I2 378 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM171BQ6P995 826 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 C18orf65Q6ZTR6 163 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 GSTA5Q7RTV2 222 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 DNAJB7Q7Z6W7 309 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ITIH5Q86UX2 942 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 METTL23Q86XA0 190 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MFSD6LQ8IWD5 586 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEP57L1Q8IYX8 460 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 DSELQ8IZU8 1212 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PDCL2Q8N4E4 241 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM105Q8N8V8 129 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ATAD1Q8NBU5 361 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 KIAA0895Q8NCT3 520 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms