RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SLC23A3Q6PIS1 610 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 NXPE4Q6UWF7 544 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 PRR23BQ6ZRT6 265 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 TMEM26Q6ZUK4 368 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 AMIGO1Q86WK6 493 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 ARL14Q8N4G2 192 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 C2orf73Q8N5S3 287 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 GPR156Q8NFN8 814 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 METTL6Q8TCB7 284 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 ACTRT2Q8TDY3 377 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 SLC5A11Q8WWX8 675 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 LCN9Q8WX39 176 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 JPH3Q8WXH2 748 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 USP7Q93009 1102 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 PRR11Q96HE9 360 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 OR52B2Q96RD2 323 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 CCDC28BQ9BUN5 200 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 COL25A1Q9BXS0 654 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 UCK1Q9HA47 277 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 PELI2Q9HAT8 420 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 TAC3Q9UHF0 121 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 SLC6A14Q9UN76 642 aa14.23□□□□□ -0.13
SHKBP1-211ENST00000595945 SERTM1A2A2V5 107 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 BTN3A3O00478 584 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 PIP5K1BO14986 540 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 DFNA5O60443 496 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 CRCPO75575 148 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 CHRM5P08912 532 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 C1GALT1C1LP0DN25 315 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 HNF4AP41235 474 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 MAZP56270 477 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 DEFB133Q30KQ1 61 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 HLA-BQ31612 363 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 XKR6Q5GH73 641 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 CATSPEREQ5SY80 951 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 C6orf89Q6UWU4 347 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 ABHD11Q8NFV4 315 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 OR2A1Q8NGT9 310 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 FLVCR1-AS1Q8TAF5 88 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 C19orf60Q96EN9 201 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 PTCD3Q96EY7 689 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 C3orf30Q96M34 536 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 CCT7Q99832 543 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 SRMSQ9H3Y6 488 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 WDR55Q9H6Y2 383 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 SPHK1Q9NYA1 384 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 DOLKQ9UPQ8 538 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 PCDHB11Q9Y5F2 797 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 MUC6Q6W4X9 2439 aa14.22□□□□□ -0.13
SHKBP1-211ENST00000595945 PATE3B3GLJ2 98 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 H0YIV9 168 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 HGSO14964 777 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 YKT6O15498 198 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 DIAPH2O60879 1101 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 CHEK2O96017 543 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 CFIP05156 583 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 VARSP26640 1264 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 PSMB5P28074 263 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 EPHA3P29320 983 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 HMOX2P30519 316 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 ARL1P40616 181 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 YBX1P67809 324 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 ABATP80404 500 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 HHEXQ03014 270 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 PRDX1Q06830 199 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 ZRSR2Q15696 482 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 C6orf132Q5T0Z8 1188 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 THEMIS2Q5TEJ8 643 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 ICE2Q659A1 982 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 FOXR1Q6PIV2 292 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 IL27RAQ6UWB1 636 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 C17orf64Q86WR6 236 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 FAM129CQ86XR2 697 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 OR4E2Q8NGC2 313 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 OR4K1Q8NGD4 311 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 SAP25Q8TEE9 199 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 EFCAB11Q9BUY7 163 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 MYLK2Q9H1R3 596 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 TCF7L2Q9NQB0 619 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 FSCN3Q9NQT6 498 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 ABCF3Q9NUQ8 709 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 CUEDC1Q9NWM3 386 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 GEMIN8Q9NWZ8 242 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 HEY2Q9UBP5 337 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 BTRCQ9Y297 605 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 CCL27Q9Y4X3 112 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 PCDHGA5Q9Y5G8 931 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 PTGDR2Q9Y5Y4 395 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 R4GN57 208 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 WDR87Q6ZQQ6 2873 aa14.21□□□□□ -0.13
SHKBP1-211ENST00000595945 ASCC3Q8N3C0 2202 aaKnown RBP14.21□□□□□ -0.14
SHKBP1-211ENST00000595945 GOLGA8QA0A0J9YX86 632 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 GOLGA8OA6NCC3 632 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 LILRA5A6NI73 299 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 GOLGA8NF8WBI6 632 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 FFAR3O14843 346 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 PPM1DO15297 605 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 GPR42O15529 346 aa14.2□□□□□ -0.14
SHKBP1-211ENST00000595945 KRT6AP02538 564 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms