RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PDZK1P1A8MUH7 402 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 SORBS2O94875 1100 aaKnown RBP20.48■□□□□ 0.87
VRK2-201ENST00000340157 PRPH2P23942 346 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 THOP1P52888 689 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 RPE65Q16518 533 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 IMPG1Q17R60 797 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 PRAMEF14Q5SWL7 426 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 PRAMEF13Q5VWM6 474 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 PGM2L1Q6PCE3 622 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 BLOC1S3Q6QNY0 202 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 CYP20A1Q6UW02 462 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 SCUBE1Q8IWY4 988 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 HOMEZQ8IX15 550 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 WDR60Q8WVS4 1066 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 SPNS1Q9H2V7 528 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 C1orf109Q9NX04 203 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 SPATA7Q9P0W8 599 aa20.48■□□□□ 0.87
VRK2-201ENST00000340157 SNRNP200O75643 2136 aaKnown RBP20.48■□□□□ 0.87
VRK2-201ENST00000340157 A0A1W2PPC4 97 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 NPIPB8E9PQR5 432 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 PI15O43692 258 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 NRP2O60462 931 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 RSL1D1O76021 490 aaKnown RBP20.47■□□□□ 0.87
VRK2-201ENST00000340157 RABIFP47224 123 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 TBL3Q12788 808 aaKnown RBP20.47■□□□□ 0.87
VRK2-201ENST00000340157 RCAN2Q14206 197 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 SMU1Q2TAY7 513 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 ATG9BQ674R7 924 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 LCTLQ6UWM7 567 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 EFCAB3Q8N7B9 438 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 NUDT8Q8WV74 236 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 SLC5A11Q8WWX8 675 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 CAMK1GQ96NX5 476 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 GEMIN8Q9NWZ8 242 aaKnown RBP20.47■□□□□ 0.87
VRK2-201ENST00000340157 ZIM2Q9NZV7 527 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 DYRK1BQ9Y463 629 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 ASPDHA6ND91 283 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 SEC22BO75396 215 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 MTAPQ13126 283 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 STX5Q13190 355 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 RIPK1Q13546 671 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 VPS26BQ4G0F5 336 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 NRROSQ86YC3 692 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 ARHGAP24Q8N264 748 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 SPEM1Q8N4L4 309 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 OR7G3Q8NG95 312 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 SETD7Q8WTS6 366 aaKnown RBP20.47■□□□□ 0.87
VRK2-201ENST00000340157 MTERF1Q99551 399 aaKnown RBP20.47■□□□□ 0.87
VRK2-201ENST00000340157 ASIC5Q9NY37 505 aa20.47■□□□□ 0.87
VRK2-201ENST00000340157 TOR1BO14657 336 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 TDRD6O60522 2096 aaKnown RBP20.46■□□□□ 0.87
VRK2-201ENST00000340157 SLC22A3O75751 556 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 PDE5AO76074 875 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 RASGRP1O95267 797 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 C1GALT1C1LP0DN25 315 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 MTHFD1P11586 935 aaKnown RBP20.46■□□□□ 0.87
VRK2-201ENST00000340157 CCND1P24385 295 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 PSMB5P28074 263 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 PTGR1Q14914 329 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 NXPE4Q6UWF7 544 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 ABRAXAS1Q6UWZ7 409 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 HID1Q8IV36 788 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 UBALD2Q8IYN6 164 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 PGAM4Q8N0Y7 254 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 APIPQ96GX9 242 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 ACAT2Q9BWD1 397 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 MRPL1Q9BYD6 325 aaKnown RBP20.46■□□□□ 0.87
VRK2-201ENST00000340157 EHD1Q9H4M9 534 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 XKR8Q9H6D3 395 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 WDR41Q9HAD4 459 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 SPATA6Q9NWH7 488 aaPredicted RBP20.46■□□□□ 0.87
VRK2-201ENST00000340157 MAP10Q9P2G4 905 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 KLF15Q9UIH9 416 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 INVSQ9Y283 1065 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 DLGAP4Q9Y2H0 992 aa20.46■□□□□ 0.87
VRK2-201ENST00000340157 A6NCN8 305 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 MRASO14807 208 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 ATP6V1G2O95670 118 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 HSD17B2P37059 387 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 MEF2AQ02078 507 aaPredicted RBP20.45■□□□□ 0.86
VRK2-201ENST00000340157 CSTF3Q12996 717 aaKnown RBP20.45■□□□□ 0.86
VRK2-201ENST00000340157 ART3Q13508 389 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 SLBPQ14493 270 aaKnown RBP eCLIP20.45■□□□□ 0.86
VRK2-201ENST00000340157 THEMIS2Q5TEJ8 643 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 C16orf89Q6UX73 402 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 WASH2PQ6VEQ5 465 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 PARP9Q8IXQ6 854 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 TCEAL2Q9H3H9 227 aaPredicted RBP20.45■□□□□ 0.86
VRK2-201ENST00000340157 WASH6PQ9NQA3 447 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 TAC3Q9UHF0 121 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 PCDHGA11Q9Y5H2 935 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 DGKBQ9Y6T7 804 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 ABCA7Q8IZY2 2146 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 KNL1Q8NG31 2342 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 ETHE1O95571 254 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 CDH1P12830 882 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 ZNF33BQ06732 778 aa20.45■□□□□ 0.86
VRK2-201ENST00000340157 EIF2B5Q13144 721 aaKnown RBP20.45■□□□□ 0.86
VRK2-201ENST00000340157 DDX39BQ13838 428 aaKnown RBP20.45■□□□□ 0.86
VRK2-201ENST00000340157 KPNB1Q14974 876 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms