RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CCDC138Q96M89 665 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 FOPNLQ96NB1 174 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 HIST1H2AJQ99878 128 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 EBF4Q9BQW3 602 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 H2AFJQ9BTM1 129 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 TRIM54Q9BYV2 358 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 ATG10Q9H0Y0 220 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 Q9H521 79 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 INTS7Q9NVH2 962 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 TRNAU1APQ9NX07 287 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 CHCHD3Q9NX63 227 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 WWOXQ9NZC7 414 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 PTTG2Q9NZH5 202 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 STOX2Q9P2F5 926 aaPredicted RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 ASF1AQ9Y294 204 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 TNPO3Q9Y5L0 923 aaKnown RBP14.26□□□□□ -0.13
CXCL12-201ENST00000343575 SPAG17Q6Q759 2223 aa14.26□□□□□ -0.13
CXCL12-201ENST00000343575 FANCMQ8IYD8 2048 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PRAMEF33A0A0G2JMD5 474 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 MEI4A8MW99 385 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PRAMEF4O60810 478 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 STK16O75716 305 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 RASGRP1O95267 797 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 S100BP04271 92 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 CELA2BP08218 269 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 MAPK9P45984 424 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 HNMTP50135 292 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 AQP5P55064 265 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 CSTF1Q05048 431 aaKnown RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PTK2BQ14289 1009 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 UAP1L1Q3KQV9 507 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 VWA5B1Q5TIE3 1220 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PRAMEF9Q5VWM5 478 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 ARMCX6Q7L4S7 300 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 SYVN1Q86TM6 617 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 TREML1Q86YW5 311 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 LRRC56Q8IYG6 542 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 FAM174AQ8TBP5 190 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 ZNF480Q8WV37 535 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PPP1R14BQ96C90 147 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 DGCR14Q96DF8 476 aaKnown RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PRR11Q96HE9 360 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 HGH1Q9BTY7 390 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 NOL11Q9H8H0 719 aaKnown RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 ARMCX1Q9P291 453 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 PCOLCE2Q9UKZ9 415 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 TDRD6O60522 2096 aaKnown RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 OR52A4PA6NMU1 304 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 CASQ2O14958 399 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 FGF4P08620 206 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 IDSP22304 550 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 MAP4P27816 1152 aaKnown RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 TRAF3Q13114 568 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 GTF2H2Q13888 395 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 LRP8Q14114 963 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 CLEC6AQ6EIG7 209 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 GTF2H2CQ6P1K8 395 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 METTL2BQ6P1Q9 378 aaKnown RBP14.25□□□□□ -0.13
CXCL12-201ENST00000343575 AGTRAPQ6RW13 159 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 ABRAXAS1Q6UWZ7 409 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 TMEM126BQ8IUX1 230 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 DCBLD1Q8N8Z6 715 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 OR5K2Q8NHB8 316 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 GPBAR1Q8TDU6 330 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 CDK15Q96Q40 435 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 KCNA7Q96RP8 456 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 MIR1-1HGQ9H1L0 117 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 MID1IP1Q9NPA3 183 aa14.25□□□□□ -0.13
CXCL12-201ENST00000343575 K7EPI3 171 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 TLR4O00206 839 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 HRO43593 1189 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 SLC35G4P0C7Q5 338 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 ITPKAP23677 461 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 CHN2P52757 468 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 ERVPABLB-1P60509 514 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 PRKG2Q13237 762 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 TUBB3Q13509 450 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 LETMD1Q6P1Q0 360 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 WASH2PQ6VEQ5 465 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 IQCHQ86VS3 1027 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 PARGQ86W56 976 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 DTWD2Q8NBA8 298 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 OR9A1PQ8NGU1 263 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 OR56A3Q8NH54 315 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 NELL1Q92832 810 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 GFM2Q969S9 779 aaKnown RBP14.24□□□□□ -0.13
CXCL12-201ENST00000343575 C12orf66Q96MD2 445 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 OR4K3Q96R72 315 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 ZNF382Q96SR6 550 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 SLC32A1Q9H598 525 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 IPPKQ9H8X2 491 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 EML4Q9HC35 981 aaKnown RBP14.24□□□□□ -0.13
CXCL12-201ENST00000343575 WASH6PQ9NQA3 447 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 OPTCQ9UBM4 332 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 PLAGL1Q9UM63 463 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 SLC22A14Q9Y267 594 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 TRAF6Q9Y4K3 522 aa14.24□□□□□ -0.13
CXCL12-201ENST00000343575 A0A088AWK7 358 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 E7ENX8 843 aa14.23□□□□□ -0.13
CXCL12-201ENST00000343575 IFRD1O00458 451 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms