RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TAX1BP1Q86VP1 789 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 ATCAYQ86WG3 371 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 REXO1L1PQ8IX06 675 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 NAT8LQ8N9F0 302 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 OR9A1PQ8NGU1 263 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 GRK7Q8WTQ7 553 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 SELENOSQ9BQE4 189 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 NUDT9Q9BW91 350 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 FAM114A2Q9NRY5 505 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 CUTCQ9NTM9 273 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 GPR83Q9NYM4 423 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 PLAAQ9Y263 795 aa17.01■□□□□ 0.31
HDDC3-201ENST00000330334 FER1L5A0AVI2 2057 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 TTLL8A6PVC2 850 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 E5RI56 91 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 CTSVO60911 334 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 PHF2O75151 1096 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 USP1O94782 785 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 SORBS2O94875 1100 aaKnown RBP17■□□□□ 0.31
HDDC3-201ENST00000330334 ITGAXP20702 1163 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 MLLT10P55197 1068 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 THOC5Q13769 683 aaKnown RBP17■□□□□ 0.31
HDDC3-201ENST00000330334 UBAP2LQ14157 1087 aaKnown RBP17■□□□□ 0.31
HDDC3-201ENST00000330334 KCTD19Q17RG1 926 aaPredicted RBP17■□□□□ 0.31
HDDC3-201ENST00000330334 TTLL9Q3SXZ7 439 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 ACSBG2Q5FVE4 666 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 COLEC12Q5KU26 742 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 DCAF10Q5QP82 559 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 ZNF470Q6ECI4 717 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 TTLL10Q6ZVT0 673 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 CLEC1AQ8NC01 280 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 FBXO15Q8NCQ5 510 aaPredicted RBP17■□□□□ 0.31
HDDC3-201ENST00000330334 CALML6Q8TD86 181 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 COG1Q8WTW3 980 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 SMPDL3AQ92484 453 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 KCNJ9Q92806 393 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 SIGLEC10Q96LC7 697 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 OSBPL9Q96SU4 736 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 P4HTMQ9NXG6 502 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 ANKMY1Q9P2S6 941 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 GALPQ9UBC7 116 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 RUVBL2Q9Y230 463 aaKnown RBP17■□□□□ 0.31
HDDC3-201ENST00000330334 COMMD10Q9Y6G5 202 aa17■□□□□ 0.31
HDDC3-201ENST00000330334 GOLGA6L10A0A0M3HER8 536 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 OR2A25A4D2G3 310 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 CTAGE9A4FU28 777 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 ARHGEF33A8MVX0 844 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 CATP04040 527 aaKnown RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 UMODP07911 640 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 MMP11P24347 488 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 VARSP26640 1264 aaKnown RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 TERF1P54274 439 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 EMP3P54852 163 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 RELAQ04206 551 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 LONRF1Q17RB8 773 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 KLHL38Q2WGJ6 581 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 NADK2Q4G0N4 442 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 VWA5B1Q5TIE3 1220 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 PPP1R32Q7Z5V6 425 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 PPIL6Q8IXY8 311 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 TTC29Q8NA56 475 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 ZNF669Q96BR6 464 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 MIPEPQ99797 713 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 TRIM56Q9BRZ2 755 aaKnown RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 NXT1Q9UKK6 140 aaKnown RBP16.99■□□□□ 0.31
HDDC3-201ENST00000330334 MED16Q9Y2X0 877 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 FAM169AQ9Y6X4 670 aa16.99■□□□□ 0.31
HDDC3-201ENST00000330334 A6NL46 340 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 ZNF839A8K0R7 811 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 GOLGA8MH3BSY2 632 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 GFYI3L273 518 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 AGPSO00116 658 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 ENO3P13929 434 aaPredicted RBP16.98■□□□□ 0.31
HDDC3-201ENST00000330334 PSMB5P28074 263 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 CMPK1P30085 196 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 FASTKQ14296 549 aaKnown RBP16.98■□□□□ 0.31
HDDC3-201ENST00000330334 MYBPC3Q14896 1274 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 NKG7Q16617 165 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 WASHC2DQ5SRD0 308 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 JMJD6Q6NYC1 403 aaPredicted RBP16.98■□□□□ 0.31
HDDC3-201ENST00000330334 FBXO42Q6P3S6 717 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 IGFL3Q6UXB1 125 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 RNF44Q7L0R7 432 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 DENND6AQ8IWF6 608 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 GALNT11Q8NCW6 608 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 ASB11Q8WXH4 323 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 FAM136AQ96C01 138 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 CCDC68Q9H2F9 335 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 SNX12Q9UMY4 172 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 DHRS7Q9Y394 339 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 MAP4K5Q9Y4K4 846 aa16.98■□□□□ 0.31
HDDC3-201ENST00000330334 ANKRD12Q6UB98 2062 aa16.97■□□□□ 0.31
HDDC3-201ENST00000330334 HYKKA2RU49 373 aa16.97■□□□□ 0.31
HDDC3-201ENST00000330334 VSTM2BA6NLU5 285 aa16.97■□□□□ 0.31
HDDC3-201ENST00000330334 EIF3FO00303 357 aaPredicted RBP16.97■□□□□ 0.31
HDDC3-201ENST00000330334 KIF5CO60282 957 aa16.97■□□□□ 0.31
HDDC3-201ENST00000330334 ALPPP05187 535 aa16.97■□□□□ 0.31
HDDC3-201ENST00000330334 MPC1LP0DKB6 136 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms