RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 WASHC1A8K0Z3 465 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 F9P00740 461 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 CDK1P06493 297 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ATF6P18850 670 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 CPN2P22792 545 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 EVI2BP34910 448 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ERVK-8P63133 956 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 RPP38P78345 283 aaKnown RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 GRIK2Q13002 908 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 VEPH1Q14D04 833 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 OR4D1Q15615 310 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 OTUD1Q5VV17 481 aaPredicted RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 SAXO2Q658L1 398 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 CCDC149Q6ZUS6 474 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 DEFB106AQ8N104 65 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 VANGL1Q8TAA9 524 aaPredicted RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ATXN3LQ9H3M9 355 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ZNF302Q9NR11 478 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 KRT84Q9NSB2 600 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 DCAF13Q9NV06 445 aaKnown RBP12.49□□□□□ -0.41
HERC3-203ENST00000407637 GPR83Q9NYM4 423 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ABCG2Q9UNQ0 655 aa12.49□□□□□ -0.41
HERC3-203ENST00000407637 ASB14A6NK59 587 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 G3V3G9 751 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 SCAMP3O14828 347 aaKnown RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 MUSKO15146 869 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 MLYCDO95822 493 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 KELP23276 732 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 MRPL19P49406 292 aaKnown RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 TSTQ16762 297 aaKnown RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 KYAT1Q16773 422 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 XKR7Q5GH72 579 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 ZNF648Q5T619 568 aaPredicted RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 ZDHHC17Q8IUH5 632 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 ZDHHC21Q8IVQ6 265 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 OR8J3Q8NGG0 315 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 GGHQ92820 318 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 TTPALQ9BTX7 342 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 TRIM45Q9H8W5 580 aaPredicted RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 TREX1Q9NSU2 369 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 PDP1Q9P0J1 537 aaPredicted RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 USP21Q9UK80 565 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 GMEB2Q9UKD1 530 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 CSADQ9Y600 493 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 OR5K4A6NMS3 321 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 ARVCFO00192 962 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 CREG1O75629 220 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 SSTR4P31391 388 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 ARHGDIAP52565 204 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 PSPHP78330 225 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 LCP2Q13094 533 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 MAB21L1Q13394 359 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 GRIK4Q16099 956 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 HKDC1Q2TB90 917 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 FBXO43Q4G163 708 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 VSIG10LQ86VR7 867 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 LURAP1LQ8IV03 231 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 PHACTR4Q8IZ21 702 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 DCBLD1Q8N8Z6 715 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 ATG16L2Q8NAA4 619 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 C7orf57Q8NEG2 295 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 MYDGFQ969H8 173 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 ZNF578Q96N58 590 aaPredicted RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 GFM1Q96RP9 751 aaKnown RBP12.48□□□□□ -0.41
HERC3-203ENST00000407637 MAGIXQ9H6Y5 334 aa12.48□□□□□ -0.41
HERC3-203ENST00000407637 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 PLA2G10O15496 165 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 HCRTO43612 131 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 ZNF623O75123 536 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 SCELO95171 688 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CD1DP15813 335 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 PAMP19021 973 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 RPS19P39019 145 aaKnown RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 KCNQ1P51787 676 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 MRPL28Q13084 256 aaKnown RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 SLC14A2Q15849 920 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 TAF12Q16514 161 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 KIAA0930Q6ICG6 404 aaPredicted RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 ZNF782Q6ZMW2 699 aaPredicted RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 GPR149Q86SP6 731 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 RNF130Q86XS8 419 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 CLHC1Q8NHS4 586 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 MRPL45Q9BRJ2 306 aaKnown RBP12.47□□□□□ -0.41
HERC3-203ENST00000407637 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
HERC3-203ENST00000407637 EXOSC4Q9NPD3 245 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms