RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 MARCH5Q9NX47 278 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SLAMF8Q9P0V8 285 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ENTPD4Q9Y227 616 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 COL11A1P12107 1806 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TTC3P53804 2025 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CXCR2P25025 360 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 OXTRP30559 389 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 KRT20P35900 424 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 RPS7P62081 194 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 GALNT18Q6P9A2 607 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 AGTRAPQ6RW13 159 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 GALNT10Q86SR1 603 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MMAAQ8IVH4 418 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 REM2Q8IYK8 340 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 KLHL23Q8NBE8 558 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CHST14Q8NCH0 376 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PXYLP1Q8TE99 480 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ZHX1-C8orf76Q96EF9 292 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MUS81Q96NY9 551 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 GPR78Q96P69 363 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SMOXQ9NWM0 555 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CORO2BQ9UQ03 480 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 OAS3Q9Y6K5 1087 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SLC28A2O43868 658 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 STATHP02808 62 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 FGF4P08620 206 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ALOX12P18054 663 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PRPS1L1P21108 318 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PPIBP23284 216 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 RPL10P27635 214 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ELK4P28324 431 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SOX6P35712 828 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CTSKP43235 329 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 INHBCP55103 352 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CDC42P60953 191 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 HSPB3Q12988 150 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 COL9A2Q14055 689 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MEP1AQ16819 746 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MANEALQ5VSG8 457 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 OR52E8Q6IFG1 317 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CES5AQ6NT32 575 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ERICH5Q6P6B1 374 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PAGE2Q7Z2X7 111 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 KIAA2013Q8IYS2 634 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 LILRA2Q8N149 483 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 HM13Q8TCT9 377 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 GTPBP3Q969Y2 492 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 QRFPRQ96P65 431 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CEP44Q9C0F1 390 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 HMG20AQ9NP66 347 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CD320Q9NPF0 282 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 EQTNQ9NQ60 294 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MAPRE3Q9UPY8 281 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 NPIPB15A6NHN6 443 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ZNF195O14628 629 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MMP20O60882 483 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 SOCS5O75159 536 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 NTSP30990 170 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MAT2AP31153 395 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 VIPR1P32241 457 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TM4SF4P48230 202 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PLA2G16P53816 162 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ARSFP54793 590 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 DEFA1P59665 94 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 DEFA3P59666 94 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 RPL26P61254 145 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ELP6Q0PNE2 266 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 GPAT3Q53EU6 434 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 CMPK2Q5EBM0 449 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ARMC6Q6NXE6 501 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TNFAIP8L2Q6P589 184 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 BRAT1Q6PJG6 821 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 LRRC70Q7Z2Q7 622 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 SLCO6A1Q86UG4 719 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PACRGLQ8N7B6 248 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PRICKLE1Q96MT3 831 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 OR51B5Q9H339 312 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TOR3AQ9H497 397 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 IL36AQ9UHA7 158 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PRSS21Q9Y6M0 314 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TGM5O43548 720 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TSPAN6O43657 245 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 UGT2B11O75310 529 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 EEDO75530 441 aaKnown RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MAGP20916 626 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 BUD31P41223 144 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-206ENST00000368215 HNMTP50135 292 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 AP1S2P56377 157 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 PIGFQ07326 219 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MBTPS1Q14703 1052 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 MED22Q15528 200 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 GCNT6Q5T4J0 391 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ZFAND4Q86XD8 727 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 OR5K1Q8NHB7 308 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 IRF7Q92985 503 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TNFRSF12AQ9NP84 129 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 ABCB10Q9NRK6 738 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 GALNT8Q9NY28 637 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 TEKT2Q9UIF3 430 aa8.24□□□□□ -1.09
PTPRK-206ENST00000368215 FZD4Q9ULV1 537 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms