RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 SMC1P32908 1225 aa1.05□□□□□ -2.24
snR53snR53 YKL077WP36081 392 aa1.05□□□□□ -2.24
snR53snR53 SDS3P40505 327 aa1.05□□□□□ -2.24
snR53snR53 ECM23Q02710 187 aa1.05□□□□□ -2.24
snR53snR53 RGT2Q12300 763 aa1.05□□□□□ -2.24
snR53snR53 RPB10P22139 70 aa1.04□□□□□ -2.24
snR53snR53 ILV6P25605 309 aaKnown RBP1.04□□□□□ -2.24
snR53snR53 YNR063WP53749 607 aa1.04□□□□□ -2.24
snR53snR53 PUN1Q06991 263 aa1.04□□□□□ -2.24
snR53snR53 LAP2Q10740 671 aa1.04□□□□□ -2.24
snR53snR53 RIB2Q12362 591 aaKnown RBP1.04□□□□□ -2.24
snR53snR53 GFA1P14742 717 aaKnown RBP1.03□□□□□ -2.24
snR53snR53 UBX7P38349 436 aa1.03□□□□□ -2.24
snR53snR53 NEM1P38757 446 aa1.03□□□□□ -2.24
snR53snR53 QNS1P38795 714 aaKnown RBP1.03□□□□□ -2.24
snR53snR53 ARO10Q06408 635 aa1.03□□□□□ -2.24
snR53snR53 KIN2P13186 1147 aaKnown RBP1.02□□□□□ -2.25
snR53snR53 APL1P27351 700 aa1.02□□□□□ -2.25
snR53snR53 KTR4P38131 464 aa1.02□□□□□ -2.25
snR53snR53 MET30P39014 640 aa1.02□□□□□ -2.25
snR53snR53 HBT1Q07653 1046 aaKnown RBP1.02□□□□□ -2.25
snR53snR53 NOB1Q08444 459 aaKnown RBP1.02□□□□□ -2.25
snR53snR53 ERG4P25340 473 aa1.01□□□□□ -2.25
snR53snR53 ATG14P38270 344 aa1.01□□□□□ -2.25
snR53snR53 RPL34BP40525 121 aaKnown RBP1.01□□□□□ -2.25
snR53snR53 TAH11P47112 604 aa1.01□□□□□ -2.25
snR53snR53 CIR2Q08822 631 aa1.01□□□□□ -2.25
snR53snR53 APC11Q12157 165 aa1.01□□□□□ -2.25
snR53snR53 LAS17Q12446 633 aa1.01□□□□□ -2.25
snR53snR53 HCA4P20448 770 aaKnown RBP1□□□□□ -2.25
snR53snR53 BAP2P38084 609 aa1□□□□□ -2.25
snR53snR53 EXO5P38289 585 aa1□□□□□ -2.25
snR53snR53 PIK1P39104 1066 aa1□□□□□ -2.25
snR53snR53 ATG32P40458 529 aa1□□□□□ -2.25
snR53snR53 MTR4P47047 1073 aaKnown RBP1□□□□□ -2.25
snR53snR53 BUL1P48524 976 aa1□□□□□ -2.25
snR53snR53 MAP1Q01662 387 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
snR53snR53 KCS1Q12494 1050 aa1□□□□□ -2.25
snR53snR53 BIM1P40013 344 aa0.99□□□□□ -2.25
snR53snR53 TNA1P53322 534 aa0.99□□□□□ -2.25
snR53snR53 YAF9P53930 226 aa0.99□□□□□ -2.25
snR53snR53 HOS3Q02959 697 aaKnown RBP0.99□□□□□ -2.25
snR53snR53 TPO1Q07824 586 aa0.99□□□□□ -2.25
snR53snR53 MET6P05694 767 aaKnown RBP0.98□□□□□ -2.25
snR53snR53 HIS5P07172 385 aa0.98□□□□□ -2.25
snR53snR53 PTP1P25044 335 aa0.98□□□□□ -2.25
snR53snR53 ORC2P32833 620 aa0.98□□□□□ -2.25
snR53snR53 XKS1P42826 600 aa0.98□□□□□ -2.25
snR53snR53 VPS73P53142 486 aaKnown RBP0.98□□□□□ -2.25
snR53snR53 RNT1Q02555 471 aa0.98□□□□□ -2.25
snR53snR53 MRI1Q06489 411 aaKnown RBP0.98□□□□□ -2.25
snR53snR53 ENB1Q08299 606 aa0.98□□□□□ -2.25
snR53snR53 ADY2P25613 283 aa0.97□□□□□ -2.25
snR53snR53 PEP7P32609 515 aa0.97□□□□□ -2.25
snR53snR53 SAP155P43612 1002 aa0.97□□□□□ -2.25
snR53snR53 MET12P46151 657 aa0.97□□□□□ -2.25
snR53snR53 UTP5Q04177 643 aaKnown RBP0.97□□□□□ -2.25
snR53snR53 PMT7Q06644 662 aa0.97□□□□□ -2.25
snR53snR53 PPR1P07272 904 aaPredicted RBP0.96□□□□□ -2.26
snR53snR53 ALG7P07286 448 aa0.96□□□□□ -2.26
snR53snR53 KIP1P28742 1111 aa0.96□□□□□ -2.26
snR53snR53 SIS2P36024 562 aa0.96□□□□□ -2.26
snR53snR53 TGL4P36165 910 aa0.96□□□□□ -2.26
snR53snR53 GEF1P37020 779 aa0.96□□□□□ -2.26
snR53snR53 POA1P38218 177 aa0.96□□□□□ -2.26
snR53snR53 RIM13Q03792 727 aa0.96□□□□□ -2.26
snR53snR53 SVS1Q12254 260 aa0.96□□□□□ -2.26
snR53snR53 SNF5P18480 905 aa0.95□□□□□ -2.26
snR53snR53 RRN6P32786 894 aa0.95□□□□□ -2.26
snR53snR53 CHA4P43634 648 aa0.95□□□□□ -2.26
snR53snR53 VPS53P47061 822 aa0.95□□□□□ -2.26
snR53snR53 SIZ1Q04195 904 aa0.95□□□□□ -2.26
snR53snR53 ADY3Q07732 790 aa0.95□□□□□ -2.26
snR53snR53 CAD1P24813 409 aaKnown RBP0.94□□□□□ -2.26
snR53snR53 YIL166CP40445 542 aa0.94□□□□□ -2.26
snR53snR53 MND2P40577 368 aa0.94□□□□□ -2.26
snR53snR53 MSC2Q03455 724 aa0.94□□□□□ -2.26
snR53snR53 SHU2P38957 223 aa0.93□□□□□ -2.26
snR53snR53 CCT4P39078 528 aaKnown RBP0.93□□□□□ -2.26
snR53snR53 NET1P47035 1189 aa0.93□□□□□ -2.26
snR53snR53 BNA3P47039 444 aaKnown RBP0.93□□□□□ -2.26
snR53snR53 NUT1P53114 1132 aa0.93□□□□□ -2.26
snR53snR53 PUF6Q04373 656 aaKnown RBP0.93□□□□□ -2.26
snR53snR53 CDC43P18898 376 aa0.92□□□□□ -2.26
snR53snR53 KAR4P25583 335 aa0.92□□□□□ -2.26
snR53snR53 YAP1801P38856 637 aa0.92□□□□□ -2.26
snR53snR53 RAT1Q02792 1006 aaKnown RBP0.92□□□□□ -2.26
snR53snR53 TRM13Q12383 476 aa0.92□□□□□ -2.26
snR53snR53 NPC2Q12408 173 aa0.92□□□□□ -2.26
snR53snR53 PPS1P38148 807 aa0.91□□□□□ -2.26
snR53snR53 YHL017WP38745 532 aa0.91□□□□□ -2.26
snR53snR53 YFL054CP43549 646 aa0.91□□□□□ -2.26
snR53snR53 MON1P53129 644 aa0.91□□□□□ -2.26
snR53snR53 SEG1Q04279 960 aa0.91□□□□□ -2.26
snR53snR53 GEP3Q08622 556 aa0.91□□□□□ -2.26
snR53snR53 ZRG8P40021 1076 aa0.9□□□□□ -2.27
snR53snR53 ENA1P13587 1091 aa0.89□□□□□ -2.27
snR53snR53 HOM2P13663 365 aaKnown RBP0.89□□□□□ -2.27
snR53snR53 KIN3P22209 435 aa0.89□□□□□ -2.27
snR53snR53 ENA2Q01896 1091 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms