RNA–Protein interactions for RNA: snR128

snR128, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR128, Length 126 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR128snR128 PMT7Q06644 662 aa0.34□□□□□ -2.36
snR128snR128 CDA1Q06702 301 aa0.34□□□□□ -2.36
snR128snR128 SUB2Q07478 446 aaKnown RBP0.34□□□□□ -2.36
snR128snR128 ACK1Q07622 623 aaPredicted RBP0.34□□□□□ -2.36
snR128snR128 YLR040CQ07988 224 aa0.34□□□□□ -2.36
snR128snR128 INP54Q08227 384 aaKnown RBP0.34□□□□□ -2.36
snR128snR128 PPM2Q08282 695 aa0.34□□□□□ -2.36
snR128snR128 GEP3Q08622 556 aa0.34□□□□□ -2.36
snR128snR128 GPB1Q08886 897 aa0.34□□□□□ -2.36
snR128snR128 MSL5Q12186 476 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
snR128snR128 YPL066WQ12194 479 aa0.34□□□□□ -2.36
snR128snR128 WHI5Q12416 295 aa0.34□□□□□ -2.36
snR128snR128 KCS1Q12494 1050 aa0.34□□□□□ -2.36
snR128snR128 BNR1P40450 1375 aa0.33□□□□□ -2.36
snR128snR128 BI4P03879 638 aa0.33□□□□□ -2.36
snR128snR128 FBP1P09201 348 aa0.33□□□□□ -2.36
snR128snR128 TUB3P09734 445 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 YER152CP10356 443 aa0.33□□□□□ -2.36
snR128snR128 CMP2P14747 604 aa0.33□□□□□ -2.36
snR128snR128 PRP4P20053 465 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 ACE2P21192 770 aa0.33□□□□□ -2.36
snR128snR128 VMA4P22203 233 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 KIP1P28742 1111 aa0.33□□□□□ -2.36
snR128snR128 AIM26P32858 118 aa0.33□□□□□ -2.36
snR128snR128 AFR1P33304 620 aa0.33□□□□□ -2.36
snR128snR128 DUT1P33317 147 aa0.33□□□□□ -2.36
snR128snR128 ALG3P38179 458 aa0.33□□□□□ -2.36
snR128snR128 UBS1P38290 277 aa0.33□□□□□ -2.36
snR128snR128 GLO3P38682 493 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 ERP5P38819 212 aa0.33□□□□□ -2.36
snR128snR128 PEX28P38848 579 aa0.33□□□□□ -2.36
snR128snR128 PLB1P39105 664 aa0.33□□□□□ -2.36
snR128snR128 URM1P40554 99 aaPredicted RBP0.33□□□□□ -2.36
snR128snR128 MND2P40577 368 aa0.33□□□□□ -2.36
snR128snR128 SNM1P40993 198 aa0.33□□□□□ -2.36
snR128snR128 SEC26P41810 973 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 MET12P46151 657 aa0.33□□□□□ -2.36
snR128snR128 HFM1P51979 1187 aa0.33□□□□□ -2.36
snR128snR128 NCS6P53088 359 aa0.33□□□□□ -2.36
snR128snR128 MCM6P53091 1017 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 MRPS35P53292 345 aa0.33□□□□□ -2.36
snR128snR128 SIW14P53965 281 aa0.33□□□□□ -2.36
snR128snR128 ULP1Q02724 621 aa0.33□□□□□ -2.36
snR128snR128 ROD1Q02805 837 aa0.33□□□□□ -2.36
snR128snR128 TPO1Q07824 586 aa0.33□□□□□ -2.36
snR128snR128 IRC10Q08118 586 aa0.33□□□□□ -2.36
snR128snR128 NOP12Q08208 459 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 HRK1Q08732 759 aaKnown RBP0.33□□□□□ -2.36
snR128snR128 CIR2Q08822 631 aa0.33□□□□□ -2.36
snR128snR128 YLL054CQ12244 843 aa0.33□□□□□ -2.36
snR128snR128 NSI1Q12457 570 aa0.33□□□□□ -2.36
snR128snR128 FUR4P05316 633 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 HIS5P07172 385 aa0.32□□□□□ -2.36
snR128snR128 SPE1P08432 466 aa0.32□□□□□ -2.36
snR128snR128 SPS1P08458 490 aa0.32□□□□□ -2.36
snR128snR128 DBP5P20449 482 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 SSA4P22202 642 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 PUF4P25339 888 aaKnown RBP RIP-Chip data0.32□□□□□ -2.36not detected
snR128snR128 KAR4P25583 335 aa0.32□□□□□ -2.36
snR128snR128 HRR25P29295 494 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 EFT1P32324 842 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 MKK2P32491 506 aa0.32□□□□□ -2.36
snR128snR128 RRN6P32786 894 aa0.32□□□□□ -2.36
snR128snR128 MTH1P35198 433 aa0.32□□□□□ -2.36
snR128snR128 ADD66P36040 267 aa0.32□□□□□ -2.36
snR128snR128 CUE2P36075 443 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 GRS1P38088 690 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 GIC1P38785 314 aa0.32□□□□□ -2.36
snR128snR128 YAP1801P38856 637 aa0.32□□□□□ -2.36
snR128snR128 PNT1P38969 423 aa0.32□□□□□ -2.36
snR128snR128 MXR1P40029 184 aa0.32□□□□□ -2.36
snR128snR128 SDS3P40505 327 aa0.32□□□□□ -2.36
snR128snR128 MTR4P47047 1073 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 VPS53P47061 822 aa0.32□□□□□ -2.36
snR128snR128 TAH11P47112 604 aa0.32□□□□□ -2.36
snR128snR128 ENT3P47160 408 aa0.32□□□□□ -2.36
snR128snR128 HNT2P49775 206 aa0.32□□□□□ -2.36
snR128snR128 STB4P50104 949 aa0.32□□□□□ -2.36
snR128snR128 YKE2P52553 114 aa0.32□□□□□ -2.36
snR128snR128 ENV11P53246 860 aa0.32□□□□□ -2.36
snR128snR128 TNA1P53322 534 aa0.32□□□□□ -2.36
snR128snR128 DMA2P53924 522 aa0.32□□□□□ -2.36
snR128snR128 MAP1Q01662 387 aaKnown RBP RIP-Chip data0.32□□□□□ -2.36not detected
snR128snR128 LGE1Q02796 332 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 EEB1Q02891 456 aa0.32□□□□□ -2.36
snR128snR128 HOS3Q02959 697 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 ADI1Q03677 179 aa0.32□□□□□ -2.36
snR128snR128 BUL2Q03758 920 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 TIF35Q04067 274 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 HRQ1Q05549 1077 aa0.32□□□□□ -2.36
snR128snR128 RGC1Q06108 1083 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 YCS4Q06156 1176 aa0.32□□□□□ -2.36
snR128snR128 EST2Q06163 884 aa0.32□□□□□ -2.36
snR128snR128 SPP382Q06411 708 aaPredicted RBP0.32□□□□□ -2.36
snR128snR128 RRP15Q06511 250 aaPredicted RBP0.32□□□□□ -2.36
snR128snR128 BDF2Q07442 638 aa0.32□□□□□ -2.36
snR128snR128 RXT3Q07458 294 aa0.32□□□□□ -2.36
snR128snR128 WHI4Q07655 649 aaKnown RBP0.32□□□□□ -2.36
snR128snR128 NOC3Q07896 663 aaPredicted RBP0.32□□□□□ -2.36
snR128snR128 YOL073CQ08232 322 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 221.9 ms