RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W YHL050CP38721 697 aa5.42□□□□□ -1.54
SCD6YPR129W YHR219WP38900 624 aa5.42□□□□□ -1.54
SCD6YPR129W RXT3Q07458 294 aa5.42□□□□□ -1.54
SCD6YPR129W YPL260WQ08977 551 aa5.42□□□□□ -1.54
SCD6YPR129W GAL10P04397 699 aa5.41□□□□□ -1.54
SCD6YPR129W ALG3P38179 458 aa5.41□□□□□ -1.54
SCD6YPR129W SLI1P53304 468 aa5.41□□□□□ -1.54
SCD6YPR129W TOS4Q06266 489 aa5.41□□□□□ -1.54
SCD6YPR129W ACK1Q07622 623 aaPredicted RBP5.41□□□□□ -1.54
SCD6YPR129W CMP2P14747 604 aa5.4□□□□□ -1.54
SCD6YPR129W YPT53P36019 220 aa5.4□□□□□ -1.54
SCD6YPR129W RFC5P38251 354 aa5.4□□□□□ -1.54
SCD6YPR129W DAK2P43550 591 aa5.4□□□□□ -1.54
SCD6YPR129W MNN10P50108 393 aaKnown RBP5.4□□□□□ -1.54
SCD6YPR129W URN1Q06525 465 aaKnown RBP5.4□□□□□ -1.54
SCD6YPR129W GPB1Q08886 897 aa5.4□□□□□ -1.54
SCD6YPR129W TAF13P11747 167 aa5.39□□□□□ -1.55
SCD6YPR129W SRM1P21827 482 aa5.39□□□□□ -1.55
SCD6YPR129W LST4P34239 828 aa5.39□□□□□ -1.55
SCD6YPR129W GEF1P37020 779 aa5.39□□□□□ -1.55
SCD6YPR129W PBP1P53297 722 aaKnown RBP5.39□□□□□ -1.55
SCD6YPR129W NTO1Q12311 748 aa5.39□□□□□ -1.55
SCD6YPR129W DED1P06634 604 aaKnown RBP5.38□□□□□ -1.55
SCD6YPR129W CDC6P09119 513 aa5.38□□□□□ -1.55
SCD6YPR129W PMI40P29952 429 aaKnown RBP5.38□□□□□ -1.55
SCD6YPR129W MCM6P53091 1017 aaKnown RBP5.38□□□□□ -1.55
SCD6YPR129W TMA10Q06177 86 aa5.38□□□□□ -1.55
SCD6YPR129W MET4P32389 672 aa5.37□□□□□ -1.55
SCD6YPR129W SUN4P53616 420 aa5.37□□□□□ -1.55
SCD6YPR129W PPX1P38698 397 aa5.36□□□□□ -1.55
SCD6YPR129W FAA3P39002 694 aa5.36□□□□□ -1.55
SCD6YPR129W PIC2P40035 300 aa5.36□□□□□ -1.55
SCD6YPR129W RIB2Q12362 591 aaKnown RBP5.36□□□□□ -1.55
SCD6YPR129W HXK1P04806 485 aaKnown RBP5.35□□□□□ -1.55
SCD6YPR129W KIN2P13186 1147 aaKnown RBP5.35□□□□□ -1.55
SCD6YPR129W AIM21P40563 679 aa5.35□□□□□ -1.55
SCD6YPR129W CTF4Q01454 927 aa5.35□□□□□ -1.55
SCD6YPR129W VPS62P53285 467 aa5.34□□□□□ -1.55
SCD6YPR129W SIZ1Q04195 904 aa5.34□□□□□ -1.55
SCD6YPR129W YFL054CP43549 646 aa5.33□□□□□ -1.56
SCD6YPR129W YAP6Q03935 383 aa5.33□□□□□ -1.56
SCD6YPR129W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SCD6YPR129W SVS1Q12254 260 aa5.33□□□□□ -1.56
SCD6YPR129W ENT3P47160 408 aa5.32□□□□□ -1.56
SCD6YPR129W PHO23P50947 330 aa5.32□□□□□ -1.56
SCD6YPR129W RAT1Q02792 1006 aaKnown RBP5.32□□□□□ -1.56
SCD6YPR129W PMA1P05030 918 aaKnown RBP5.31□□□□□ -1.56
SCD6YPR129W RAD53P22216 821 aa5.31□□□□□ -1.56
SCD6YPR129W APL1P27351 700 aa5.31□□□□□ -1.56
SCD6YPR129W CHS7P38843 316 aa5.31□□□□□ -1.56
SCD6YPR129W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SCD6YPR129W ROD1Q02805 837 aa5.31□□□□□ -1.56
SCD6YPR129W YLR224WQ05947 369 aa5.31□□□□□ -1.56
SCD6YPR129W MKK2P32491 506 aa5.3□□□□□ -1.56
SCD6YPR129W RGD1P38339 666 aa5.3□□□□□ -1.56
SCD6YPR129W SIW14P53965 281 aa5.3□□□□□ -1.56
SCD6YPR129W ATG13Q06628 738 aa5.3□□□□□ -1.56
SCD6YPR129W HMI1Q12039 706 aa5.3□□□□□ -1.56
SCD6YPR129W EMC1P25574 760 aa5.29□□□□□ -1.56
SCD6YPR129W DCG1P32460 244 aa5.29□□□□□ -1.56
SCD6YPR129W RPT1P33299 467 aaKnown RBP5.29□□□□□ -1.56
SCD6YPR129W GTF1P53260 183 aaPredicted RBP5.29□□□□□ -1.56
SCD6YPR129W MSC6Q08818 692 aaKnown RBP5.29□□□□□ -1.56
SCD6YPR129W YER152CP10356 443 aa5.28□□□□□ -1.56
SCD6YPR129W DEF1P35732 738 aaKnown RBP5.28□□□□□ -1.56
SCD6YPR129W STM1P39015 273 aaKnown RBP5.28□□□□□ -1.56
SCD6YPR129W NOP12Q08208 459 aaKnown RBP5.28□□□□□ -1.56
SCD6YPR129W MCD1Q12158 566 aa5.28□□□□□ -1.56
SCD6YPR129W WHI5Q12416 295 aa5.28□□□□□ -1.56
SCD6YPR129W SSF1P38789 453 aaPredicted RBP5.27□□□□□ -1.57
SCD6YPR129W MSC2Q03455 724 aa5.27□□□□□ -1.57
SCD6YPR129W PRE9P23638 258 aaKnown RBP5.26□□□□□ -1.57
SCD6YPR129W MRPS18P42847 217 aa5.26□□□□□ -1.57
SCD6YPR129W THI12P42883 340 aa5.26□□□□□ -1.57
SCD6YPR129W THI5P43534 340 aa5.26□□□□□ -1.57
SCD6YPR129W THI11P47183 340 aa5.26□□□□□ -1.57
SCD6YPR129W GCV2P49095 1034 aa5.26□□□□□ -1.57
SCD6YPR129W KIN4Q01919 800 aa5.26□□□□□ -1.57
SCD6YPR129W THI13Q07748 340 aa5.26□□□□□ -1.57
SCD6YPR129W SYP1P25623 870 aaKnown RBP5.25□□□□□ -1.57
SCD6YPR129W MLS1P30952 554 aa5.25□□□□□ -1.57
SCD6YPR129W MSS4P38994 779 aa5.25□□□□□ -1.57
SCD6YPR129W HXT13P39924 564 aa5.25□□□□□ -1.57
SCD6YPR129W HXT17P53631 564 aa5.25□□□□□ -1.57
SCD6YPR129W HXT15P54854 567 aa5.25□□□□□ -1.57
SCD6YPR129W SEC8P32855 1065 aa5.24□□□□□ -1.57
SCD6YPR129W CNN1P43618 361 aa5.24□□□□□ -1.57
SCD6YPR129W YGR122WP53272 402 aa5.24□□□□□ -1.57
SCD6YPR129W YML122CQ03207 126 aa5.24□□□□□ -1.57
SCD6YPR129W BAS1P22035 811 aa5.23□□□□□ -1.57
SCD6YPR129W PLB1P39105 664 aa5.23□□□□□ -1.57
SCD6YPR129W GNP1P48813 663 aa5.23□□□□□ -1.57
SCD6YPR129W DBP5P20449 482 aaKnown RBP5.22□□□□□ -1.57
SCD6YPR129W ACE2P21192 770 aa5.22□□□□□ -1.57
SCD6YPR129W SIP5P40210 489 aaKnown RBP5.22□□□□□ -1.57
SCD6YPR129W IOC3P43596 787 aa5.22□□□□□ -1.57
SCD6YPR129W PEP7P32609 515 aa5.21□□□□□ -1.58
SCD6YPR129W RRT14P40470 206 aa5.21□□□□□ -1.58
SCD6YPR129W MPH1P40562 993 aa5.21□□□□□ -1.58
SCD6YPR129W MND2P40577 368 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms