RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSF1	YPR047W	WHI4	Q07655	649 aa	Known RBP	11.75	□□□□□ -0.53
MSF1	YPR047W	MET6	P05694	767 aa	Known RBP	11.74	□□□□□ -0.53
MSF1	YPR047W	TVP23	P38962	199 aa		11.74	□□□□□ -0.53
MSF1	YPR047W	SWI6	P09959	803 aa		11.72	□□□□□ -0.53
MSF1	YPR047W	ISW1	P38144	1129 aa		11.72	□□□□□ -0.53
MSF1	YPR047W	OYE2	Q03558	400 aa	Known RBP	11.72	□□□□□ -0.53
MSF1	YPR047W	MAK11	P20484	414 aa	Known RBP	11.71	□□□□□ -0.53
MSF1	YPR047W	VID28	P40547	921 aa		11.71	□□□□□ -0.53
MSF1	YPR047W	KRI1	P42846	591 aa	Known RBP	11.71	□□□□□ -0.53
MSF1	YPR047W	PSP2	P50109	593 aa	Known RBP	11.71	□□□□□ -0.53
MSF1	YPR047W	ORC4	P54791	529 aa		11.71	□□□□□ -0.53
MSF1	YPR047W	SVF1	Q05515	481 aa		11.71	□□□□□ -0.53
MSF1	YPR047W	GPI13	Q07830	1017 aa		11.71	□□□□□ -0.53
MSF1	YPR047W	FBP26	P32604	452 aa		11.7	□□□□□ -0.54
MSF1	YPR047W	RXT2	P38255	430 aa		11.7	□□□□□ -0.54
MSF1	YPR047W	YEL025C	P39991	1188 aa		11.7	□□□□□ -0.54
MSF1	YPR047W	AIM9	P40053	627 aa	Known RBP	11.7	□□□□□ -0.54
MSF1	YPR047W	FUB1	P25659	250 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	RME1	P32338	300 aa	Known RBP	11.69	□□□□□ -0.54
MSF1	YPR047W	UBP11	P36026	717 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	YHR131C	P38835	850 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	PCI8	P40512	444 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	SPO74	P45819	413 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	MDR1	P53258	950 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	BNI5	P53890	448 aa	Known RBP	11.69	□□□□□ -0.54
MSF1	YPR047W	SMD2	Q06217	110 aa	Known RBP	11.69	□□□□□ -0.54
MSF1	YPR047W	SRO9	P25567	434 aa	Known RBP	11.69	□□□□□ -0.54
MSF1	YPR047W	SAS3	P34218	831 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	BMH2	P34730	273 aa	Known RBP	11.69	□□□□□ -0.54
MSF1	YPR047W	YGR273C	P53329	174 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	GDE1	Q02979	1223 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	CRD1	Q07560	283 aa		11.69	□□□□□ -0.54
MSF1	YPR047W	PGK1	P00560	416 aa	Known RBP	11.68	□□□□□ -0.54
MSF1	YPR047W	SMY2	P32909	740 aa	Known RBP	11.68	□□□□□ -0.54
MSF1	YPR047W	EPL1	P43572	832 aa		11.68	□□□□□ -0.54
MSF1	YPR047W	YGR035C	P53222	116 aa		11.68	□□□□□ -0.54
MSF1	YPR047W	ZPR1	P53303	486 aa	Known RBP	11.68	□□□□□ -0.54
MSF1	YPR047W	CUS1	Q02554	436 aa	Predicted RBP	11.68	□□□□□ -0.54
MSF1	YPR047W	GIS4	Q04233	774 aa		11.68	□□□□□ -0.54
MSF1	YPR047W	PHM6	Q05637	104 aa		11.68	□□□□□ -0.54
MSF1	YPR047W	HCA4	P20448	770 aa	Known RBP	11.67	□□□□□ -0.54
MSF1	YPR047W	UBC1	P21734	215 aa	Known RBP	11.67	□□□□□ -0.54
MSF1	YPR047W	ESS1	P22696	170 aa		11.67	□□□□□ -0.54
MSF1	YPR047W	SWI4	P25302	1093 aa	Known RBP	11.67	□□□□□ -0.54
MSF1	YPR047W	MSS51	P32335	436 aa		11.67	□□□□□ -0.54
MSF1	YPR047W	OPY1	P38271	328 aa		11.67	□□□□□ -0.54
MSF1	YPR047W	YGL138C	P53122	345 aa		11.67	□□□□□ -0.54
MSF1	YPR047W	ARP5	P53946	755 aa		11.67	□□□□□ -0.54
MSF1	YPR047W	AIM33	Q04516	312 aa		11.67	□□□□□ -0.54
MSF1	YPR047W	CNM67	P53865	581 aa	Known RBP	11.66	□□□□□ -0.54
MSF1	YPR047W	FKS1	P38631	1876 aa	Known RBP	11.66	□□□□□ -0.54
MSF1	YPR047W	RIF1	P29539	1916 aa		11.66	□□□□□ -0.54
MSF1	YPR047W	MATALPHA2	P0CY08	210 aa		11.65	□□□□□ -0.54
MSF1	YPR047W	HMLALPHA2	P0CY09	210 aa		11.65	□□□□□ -0.54
MSF1	YPR047W	YKE2	P52553	114 aa		11.65	□□□□□ -0.54
MSF1	YPR047W	EMI2	Q04409	500 aa	Known RBP	11.65	□□□□□ -0.54
MSF1	YPR047W	CSM3	Q04659	317 aa		11.65	□□□□□ -0.54
MSF1	YPR047W	PGM1	P33401	570 aa	Known RBP	11.64	□□□□□ -0.55
MSF1	YPR047W	GPD2	P41911	440 aa	Known RBP	11.64	□□□□□ -0.55
MSF1	YPR047W	SAD1	P43589	448 aa		11.64	□□□□□ -0.55
MSF1	YPR047W	SKY1	Q03656	742 aa		11.64	□□□□□ -0.55
MSF1	YPR047W	ILV1	P00927	576 aa	Known RBP	11.63	□□□□□ -0.55
MSF1	YPR047W	SPT2	P06843	333 aa	Predicted RBP	11.63	□□□□□ -0.55
MSF1	YPR047W	TRL1	P09880	827 aa	Known RBP	11.63	□□□□□ -0.55
MSF1	YPR047W	CIT3	P43635	486 aa		11.63	□□□□□ -0.55
MSF1	YPR047W	DSE4	P53753	1117 aa		11.63	□□□□□ -0.55
MSF1	YPR047W	UBP10	P53874	792 aa	Predicted RBP	11.63	□□□□□ -0.55
MSF1	YPR047W	CDC48	P25694	835 aa	Known RBP	11.62	□□□□□ -0.55
MSF1	YPR047W	DID4	P36108	232 aa		11.62	□□□□□ -0.55
MSF1	YPR047W	ORC6	P38826	435 aa		11.62	□□□□□ -0.55
MSF1	YPR047W	RPN10	P38886	268 aa	Known RBP	11.62	□□□□□ -0.55
MSF1	YPR047W	GAA1	P39012	614 aa		11.62	□□□□□ -0.55
MSF1	YPR047W	RET3	P53600	189 aa		11.62	□□□□□ -0.55
MSF1	YPR047W	MFM1	Q02783	413 aa		11.62	□□□□□ -0.55
MSF1	YPR047W	IDI1	P15496	288 aa		11.61	□□□□□ -0.55
MSF1	YPR047W	SUV3	P32580	737 aa		11.61	□□□□□ -0.55
MSF1	YPR047W	DRE2	P36152	348 aa		11.61	□□□□□ -0.55
MSF1	YPR047W	FMP10	P40098	244 aa		11.61	□□□□□ -0.55
MSF1	YPR047W	NAF1	P53919	492 aa	Known RBP	11.61	□□□□□ -0.55
MSF1	YPR047W	MAG2	Q06436	670 aa	Known RBP	11.6	□□□□□ -0.55
MSF1	YPR047W	CEX1	Q12453	761 aa		11.6	□□□□□ -0.55
MSF1	YPR047W	EFT1	P32324	842 aa	Known RBP	11.6	□□□□□ -0.55
MSF1	YPR047W	MET13	P53128	600 aa		11.6	□□□□□ -0.55
MSF1	YPR047W	MUK1	Q02866	612 aa		11.6	□□□□□ -0.55
MSF1	YPR047W	CLN3	P13365	580 aa		11.59	□□□□□ -0.55
MSF1	YPR047W	MSD1	P15179	658 aa	Known RBP	11.59	□□□□□ -0.55
MSF1	YPR047W	ACF4	P47129	309 aa		11.59	□□□□□ -0.55
MSF1	YPR047W	DIP5	P53388	608 aa		11.59	□□□□□ -0.55
MSF1	YPR047W	HEH2	Q03281	663 aa		11.59	□□□□□ -0.55
MSF1	YPR047W	TSR3	Q12094	313 aa	Known RBP	11.59	□□□□□ -0.55
MSF1	YPR047W	SUP45	P12385	437 aa	Known RBP	11.58	□□□□□ -0.56
MSF1	YPR047W	THR4	P16120	514 aa	Known RBP	11.58	□□□□□ -0.56
MSF1	YPR047W	GSY1	P23337	708 aa		11.58	□□□□□ -0.56
MSF1	YPR047W	OPT1	P40897	799 aa		11.58	□□□□□ -0.56
MSF1	YPR047W	DED1	P06634	604 aa	Known RBP	11.57	□□□□□ -0.56
MSF1	YPR047W	POL3	P15436	1097 aa		11.57	□□□□□ -0.56
MSF1	YPR047W	CBP3	P21560	335 aa		11.57	□□□□□ -0.56
MSF1	YPR047W	URK1	P27515	501 aa		11.57	□□□□□ -0.56
MSF1	YPR047W	FIS1	P40515	155 aa		11.57	□□□□□ -0.56
MSF1	YPR047W	BRE2	P43132	505 aa		11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms