RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeast

Gene IRC16, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC16	YPR038W	TMA46	Q12000	345 aa	Known RBP	4.22	□□□□□ -1.73
IRC16	YPR038W	YDL177C	Q12257	170 aa		4.22	□□□□□ -1.73
IRC16	YPR038W	KIP1	P28742	1111 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	MKK2	P32491	506 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	TOD6	P34219	525 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	CCZ1	P38273	704 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	RPN3	P40016	523 aa	Known RBP	4.21	□□□□□ -1.74
IRC16	YPR038W	TNA1	P53322	534 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	SNO2	P53823	222 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	ROD1	Q02805	837 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	RTT10	Q08924	1013 aa		4.21	□□□□□ -1.74
IRC16	YPR038W	GCR1	P07261	785 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	SYP1	P25623	870 aa	Known RBP	4.2	□□□□□ -1.74
IRC16	YPR038W	AIM26	P32858	118 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	RGD1	P38339	666 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	HXT13	P39924	564 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	GNP1	P48813	663 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	HXT17	P53631	564 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	HXT15	P54854	567 aa		4.2	□□□□□ -1.74
IRC16	YPR038W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
IRC16	YPR038W	RPS13	P05756	151 aa	Known RBP	4.19	□□□□□ -1.74
IRC16	YPR038W	DBP5	P20449	482 aa	Known RBP	4.19	□□□□□ -1.74
IRC16	YPR038W	PET112	P33893	541 aa		4.19	□□□□□ -1.74
IRC16	YPR038W	MNR2	P35724	969 aa		4.19	□□□□□ -1.74
IRC16	YPR038W	CNN1	P43618	361 aa		4.19	□□□□□ -1.74
IRC16	YPR038W	RAT1	Q02792	1006 aa	Known RBP	4.19	□□□□□ -1.74
IRC16	YPR038W	HOS3	Q02959	697 aa	Known RBP	4.19	□□□□□ -1.74
IRC16	YPR038W	YOR352W	Q08816	343 aa		4.19	□□□□□ -1.74
IRC16	YPR038W	SPO21	Q12411	609 aa		4.19	□□□□□ -1.74
IRC16	YPR038W	SOD2	P00447	233 aa		4.18	□□□□□ -1.74
IRC16	YPR038W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
IRC16	YPR038W	PIK1	P39104	1066 aa		4.18	□□□□□ -1.74
IRC16	YPR038W	HNT2	P49775	206 aa		4.18	□□□□□ -1.74
IRC16	YPR038W	SVF1	Q05515	481 aa		4.18	□□□□□ -1.74
IRC16	YPR038W	RSC58	Q07979	502 aa		4.18	□□□□□ -1.74
IRC16	YPR038W	YPL277C	Q08989	487 aa		4.18	□□□□□ -1.74
IRC16	YPR038W	BAP2	P38084	609 aa		4.17	□□□□□ -1.74
IRC16	YPR038W	RSB1	Q08417	382 aa		4.17	□□□□□ -1.74
IRC16	YPR038W	SPS1	P08458	490 aa		4.16	□□□□□ -1.74
IRC16	YPR038W	CDC34	P14682	295 aa		4.16	□□□□□ -1.74
IRC16	YPR038W	GPB2	P39717	880 aa		4.16	□□□□□ -1.74
IRC16	YPR038W	YLR358C	O13565	187 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	SNF5	P18480	905 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	CLN2	P20438	545 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	MLS1	P30952	554 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	RER2	P35196	286 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	MET10	P39692	1035 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	KRI1	P42846	591 aa	Known RBP	4.15	□□□□□ -1.75
IRC16	YPR038W	GNT1	Q12096	491 aa		4.15	□□□□□ -1.75
IRC16	YPR038W	LYP1	P32487	611 aa		4.14	□□□□□ -1.75
IRC16	YPR038W	SNF7	P39929	240 aa	Known RBP	4.14	□□□□□ -1.75
IRC16	YPR038W	MPH1	P40562	993 aa		4.14	□□□□□ -1.75
IRC16	YPR038W	SEC26	P41810	973 aa	Known RBP	4.14	□□□□□ -1.75
IRC16	YPR038W	TIF35	Q04067	274 aa	Known RBP	4.14	□□□□□ -1.75
IRC16	YPR038W	MCM7	P38132	845 aa		4.13	□□□□□ -1.75
IRC16	YPR038W	SNU71	P53207	620 aa	Known RBP	4.13	□□□□□ -1.75
IRC16	YPR038W	GSF2	Q04697	403 aa	Known RBP	4.13	□□□□□ -1.75
IRC16	YPR038W	RCL1	Q08096	367 aa	Predicted RBP	4.13	□□□□□ -1.75
IRC16	YPR038W	TRP2	P00899	507 aa	Known RBP	4.12	□□□□□ -1.75
IRC16	YPR038W	THS1	P04801	734 aa	Known RBP	4.12	□□□□□ -1.75
IRC16	YPR038W	YER152C	P10356	443 aa		4.12	□□□□□ -1.75
IRC16	YPR038W	DUT1	P33317	147 aa		4.12	□□□□□ -1.75
IRC16	YPR038W	SHM2	P37291	469 aa	Known RBP	4.12	□□□□□ -1.75
IRC16	YPR038W	TYW3	P53177	273 aa		4.12	□□□□□ -1.75
IRC16	YPR038W	CLU1	Q03690	1277 aa	Known RBP	4.12	□□□□□ -1.75
IRC16	YPR038W	SPO20	Q04359	397 aa		4.12	□□□□□ -1.75
IRC16	YPR038W	RKM4	Q12504	494 aa		4.12	□□□□□ -1.75
IRC16	YPR038W	TUB2	P02557	457 aa	Known RBP	4.11	□□□□□ -1.75
IRC16	YPR038W	ABZ1	P37254	787 aa	Predicted RBP	4.11	□□□□□ -1.75
IRC16	YPR038W	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
IRC16	YPR038W	SPT20	P50875	604 aa		4.11	□□□□□ -1.75
IRC16	YPR038W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
IRC16	YPR038W	BAS1	P22035	811 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	RFC5	P38251	354 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	GEM1	P39722	662 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	EEB1	Q02891	456 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	RSM24	Q03976	319 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	ATG13	Q06628	738 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	ACM1	Q08981	209 aa		4.1	□□□□□ -1.75
IRC16	YPR038W	INO1	P11986	533 aa		4.09	□□□□□ -1.75
IRC16	YPR038W	KIN2	P13186	1147 aa	Known RBP	4.09	□□□□□ -1.75
IRC16	YPR038W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
IRC16	YPR038W	YKL107W	P34251	309 aa		4.09	□□□□□ -1.75
IRC16	YPR038W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
IRC16	YPR038W	YGR053C	P53234	283 aa		4.09	□□□□□ -1.75
IRC16	YPR038W	SGD1	Q06132	899 aa		4.09	□□□□□ -1.75
IRC16	YPR038W	SPP382	Q06411	708 aa	Predicted RBP	4.09	□□□□□ -1.75
IRC16	YPR038W	PIN2	Q12057	282 aa		4.09	□□□□□ -1.75
IRC16	YPR038W	SVS1	Q12254	260 aa		4.09	□□□□□ -1.75
IRC16	YPR038W	RPL11A	P0C0W9	174 aa	Known RBP	4.08	□□□□□ -1.76
IRC16	YPR038W	LAM1	P38851	1228 aa		4.08	□□□□□ -1.76
IRC16	YPR038W	RRT14	P40470	206 aa		4.08	□□□□□ -1.76
IRC16	YPR038W	GDE1	Q02979	1223 aa		4.08	□□□□□ -1.76
IRC16	YPR038W	PNS1	Q12412	539 aa		4.08	□□□□□ -1.76
IRC16	YPR038W	RPL11B	Q3E757	174 aa	Predicted RBP	4.08	□□□□□ -1.76
IRC16	YPR038W	CYC1	P00044	109 aa	Predicted RBP	4.07	□□□□□ -1.76
IRC16	YPR038W	CTS1	P29029	562 aa		4.07	□□□□□ -1.76
IRC16	YPR038W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
IRC16	YPR038W	UGA2	P38067	497 aa		4.07	□□□□□ -1.76
IRC16	YPR038W	TAT2	P38967	592 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms