RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	Q0182	Q9ZZW1	134 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	TFC4	P33339	1025 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	HSP78	P33416	811 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	RRP8	P38961	392 aa	Known RBP	5.23	□□□□□ -1.57
TRE1	YPL176C	UFD2	P54860	961 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	UGO1	Q03327	502 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	PSR2	Q07949	397 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	OXR1	Q08952	273 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	RRP6	Q12149	733 aa	Known RBP	5.23	□□□□□ -1.57
TRE1	YPL176C	CEX1	Q12453	761 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	TCB1	Q12466	1186 aa		5.23	□□□□□ -1.57
TRE1	YPL176C	DBF20	P32328	564 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	IMP2'	P32351	346 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	NOP4	P37838	685 aa	Known RBP	5.22	□□□□□ -1.57
TRE1	YPL176C	RTA1	P53047	317 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	YNL193W	P53870	558 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	SPC19	Q03954	165 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	YDR286C	Q05530	114 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	APL5	Q08951	932 aa	Known RBP	5.22	□□□□□ -1.57
TRE1	YPL176C	FAP7	Q12055	197 aa	Predicted RBP	5.22	□□□□□ -1.57
TRE1	YPL176C	DBP10	Q12389	995 aa	Known RBP	5.22	□□□□□ -1.57
TRE1	YPL176C	OSH2	Q12451	1283 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	ECM5	Q03214	1411 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	RAD51	P25454	400 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	MAL11	P53048	616 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	CDC55	Q00362	526 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	UTP4	Q06679	776 aa	Known RBP	5.22	□□□□□ -1.57
TRE1	YPL176C	SPO75	Q07798	868 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	YPL191C	Q08930	360 aa		5.22	□□□□□ -1.57
TRE1	YPL176C	FAL1	Q12099	399 aa	Known RBP	5.22	□□□□□ -1.57
TRE1	YPL176C	HSP60	P19882	572 aa	Known RBP	5.21	□□□□□ -1.57
TRE1	YPL176C	VMA3	P25515	160 aa		5.21	□□□□□ -1.57
TRE1	YPL176C	PTP2	P29461	750 aa		5.21	□□□□□ -1.57
TRE1	YPL176C	YKL050C	P35736	922 aa		5.21	□□□□□ -1.57
TRE1	YPL176C	YJR098C	P47139	656 aa		5.21	□□□□□ -1.57
TRE1	YPL176C	TIM11	P81449	96 aa	Predicted RBP	5.21	□□□□□ -1.57
TRE1	YPL176C	PRE9	P23638	258 aa	Known RBP	5.21	□□□□□ -1.58
TRE1	YPL176C	VMA8	P32610	256 aa	Known RBP	5.21	□□□□□ -1.58
TRE1	YPL176C	PEX5	P35056	612 aa		5.21	□□□□□ -1.58
TRE1	YPL176C	BTN2	P53286	410 aa		5.21	□□□□□ -1.58
TRE1	YPL176C	YNL011C	P53980	444 aa		5.21	□□□□□ -1.58
TRE1	YPL176C	SDH5	Q08230	162 aa		5.21	□□□□□ -1.58
TRE1	YPL176C	TOM70	P07213	617 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	CHS3	P29465	1165 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	DAL1	P32375	460 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	SMY2	P32909	740 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	MAM1	P40065	302 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	VTC4	P47075	721 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	TAF8	Q03750	510 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	SPN1	Q06505	410 aa	Predicted RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	MEF1	P25039	761 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	MOT2	P34909	587 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	YHL041W	P38730	149 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	PFD1	P46988	109 aa		5.2	□□□□□ -1.58
TRE1	YPL176C	ATP22	P50273	684 aa	Predicted RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	SUT1	P53032	299 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	NEW1	Q08972	1196 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	SGT2	Q12118	346 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	NOP58	Q12499	511 aa	Known RBP	5.2	□□□□□ -1.58
TRE1	YPL176C	MDS3	P53094	1487 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	BAS1	P22035	811 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	BET3	P36149	193 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	CCT3	P39077	534 aa	Known RBP	5.19	□□□□□ -1.58
TRE1	YPL176C	MXR1	P40029	184 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	SEC9	P40357	651 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	TMA108	P40462	946 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	RSC8	P43609	557 aa	Known RBP	5.19	□□□□□ -1.58
TRE1	YPL176C	YLR001C	Q07895	862 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	FMP25	Q08023	583 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	TRE2	Q08693	809 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	IRE1	P32361	1115 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	KTR4	P38131	464 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	VPS8	P39702	1274 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	QDR2	P40474	542 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	MRPS18	P42847	217 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	NUP85	P46673	744 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	HSV2	P50079	448 aa	Predicted RBP	5.19	□□□□□ -1.58
TRE1	YPL176C	HEH2	Q03281	663 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	PGC1	Q08959	321 aa		5.19	□□□□□ -1.58
TRE1	YPL176C	TRK1	P12685	1235 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	SGM1	P47166	707 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	PEP1	P32319	1579 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	SPT7	P35177	1332 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	ACE2	P21192	770 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	MKK2	P32491	506 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
TRE1	YPL176C	NIC96	P34077	839 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	GPP2	P40106	250 aa	Known RBP	5.18	□□□□□ -1.58
TRE1	YPL176C	EEB1	Q02891	456 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	NOC3	Q07896	663 aa	Predicted RBP	5.18	□□□□□ -1.58
TRE1	YPL176C	MCD1	Q12158	566 aa		5.18	□□□□□ -1.58
TRE1	YPL176C	RPC31	P17890	251 aa		5.17	□□□□□ -1.58
TRE1	YPL176C	PDC6	P26263	563 aa	Known RBP	5.17	□□□□□ -1.58
TRE1	YPL176C	BAP2	P38084	609 aa		5.17	□□□□□ -1.58
TRE1	YPL176C	RIM4	P38741	713 aa		5.17	□□□□□ -1.58
TRE1	YPL176C	HXT8	P40886	569 aa		5.17	□□□□□ -1.58
TRE1	YPL176C	EAF1	Q06337	982 aa		5.17	□□□□□ -1.58
TRE1	YPL176C	RSC2	Q06488	889 aa		5.17	□□□□□ -1.58
TRE1	YPL176C	RGP1	P16664	663 aa		5.16	□□□□□ -1.58
TRE1	YPL176C	SPO16	P17122	198 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms