RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C VPS8P39702 1274 aa10.57□□□□□ -0.72
SSN3YPL042C FET4P40988 552 aa10.57□□□□□ -0.72
SSN3YPL042C CIR1P42940 261 aa10.57□□□□□ -0.72
SSN3YPL042C ALG2P43636 503 aa10.57□□□□□ -0.72
SSN3YPL042C YGR117CP53270 476 aa10.57□□□□□ -0.72
SSN3YPL042C AAD16Q02895 342 aa10.57□□□□□ -0.72
SSN3YPL042C MYO5Q04439 1219 aaKnown RBP10.57□□□□□ -0.72
SSN3YPL042C COG8Q04632 607 aa10.57□□□□□ -0.72
SSN3YPL042C POB3Q04636 552 aaKnown RBP10.57□□□□□ -0.72
SSN3YPL042C AIM7Q12156 149 aa10.57□□□□□ -0.72
SSN3YPL042C HPR1P17629 752 aaKnown RBP10.57□□□□□ -0.72
SSN3YPL042C CBP3P21560 335 aa10.57□□□□□ -0.72
SSN3YPL042C PRE8P23639 250 aa10.57□□□□□ -0.72
SSN3YPL042C BMH2P34730 273 aaKnown RBP10.57□□□□□ -0.72
SSN3YPL042C BYE1P36106 594 aa10.57□□□□□ -0.72
SSN3YPL042C DSF2P38213 736 aa10.57□□□□□ -0.72
SSN3YPL042C RFC5P38251 354 aa10.57□□□□□ -0.72
SSN3YPL042C VPS29P38759 282 aa10.57□□□□□ -0.72
SSN3YPL042C CSM2P40465 213 aa10.57□□□□□ -0.72
SSN3YPL042C YNL247WP53852 767 aaKnown RBP10.57□□□□□ -0.72
SSN3YPL042C CTR9P89105 1077 aa10.57□□□□□ -0.72
SSN3YPL042C TFB3Q03290 321 aa10.57□□□□□ -0.72
SSN3YPL042C PEX19Q07418 342 aa10.57□□□□□ -0.72
SSN3YPL042C GRC3Q07845 632 aa10.57□□□□□ -0.72
SSN3YPL042C YLR278CQ05854 1341 aa10.56□□□□□ -0.72
SSN3YPL042C FOB1O13329 566 aa10.56□□□□□ -0.72
SSN3YPL042C DIT2P21595 489 aa10.56□□□□□ -0.72
SSN3YPL042C SRM1P21827 482 aa10.56□□□□□ -0.72
SSN3YPL042C MBR1P23493 339 aa10.56□□□□□ -0.72
SSN3YPL042C ADP1P25371 1049 aa10.56□□□□□ -0.72
SSN3YPL042C ARC19P33204 171 aaKnown RBP10.56□□□□□ -0.72
SSN3YPL042C RPT6Q01939 405 aaKnown RBP10.56□□□□□ -0.72
SSN3YPL042C YOR111WQ99210 232 aa10.56□□□□□ -0.72
SSN3YPL042C RNR3P21672 869 aaKnown RBP10.55□□□□□ -0.72
SSN3YPL042C SWI4P25302 1093 aaKnown RBP10.55□□□□□ -0.72
SSN3YPL042C MSH3P25336 1018 aa10.55□□□□□ -0.72
SSN3YPL042C ARL1P38116 183 aaKnown RBP10.55□□□□□ -0.72
SSN3YPL042C MAL33P38157 468 aa10.55□□□□□ -0.72
SSN3YPL042C RPN10P38886 268 aaKnown RBP10.55□□□□□ -0.72
SSN3YPL042C RRB1Q04225 511 aaKnown RBP10.55□□□□□ -0.72
SSN3YPL042C SKG3Q06315 1026 aa10.55□□□□□ -0.72
SSN3YPL042C CLC1P17891 233 aa10.54□□□□□ -0.72
SSN3YPL042C HCA4P20448 770 aaKnown RBP10.54□□□□□ -0.72
SSN3YPL042C RDS1P25611 832 aa10.54□□□□□ -0.72
SSN3YPL042C SIC1P38634 284 aa10.54□□□□□ -0.72
SSN3YPL042C YDL124WQ07551 312 aaKnown RBP10.54□□□□□ -0.72
SSN3YPL042C ELM1P32801 640 aa10.53□□□□□ -0.72
SSN3YPL042C RKM3P38222 552 aa10.53□□□□□ -0.72
SSN3YPL042C RXT2P38255 430 aa10.53□□□□□ -0.72
SSN3YPL042C PMA1P05030 918 aaKnown RBP10.53□□□□□ -0.72
SSN3YPL042C PGI1P12709 554 aaKnown RBP10.53□□□□□ -0.72
SSN3YPL042C RAD53P22216 821 aa10.53□□□□□ -0.72
SSN3YPL042C DPB3P27344 201 aa10.53□□□□□ -0.72
SSN3YPL042C MXR1P40029 184 aa10.53□□□□□ -0.72
SSN3YPL042C EMP47P43555 445 aa10.53□□□□□ -0.72
SSN3YPL042C OCA1P50946 238 aaPredicted RBP10.53□□□□□ -0.72
SSN3YPL042C CBP1P07252 654 aa10.52□□□□□ -0.73
SSN3YPL042C HOM3P10869 527 aa10.52□□□□□ -0.73
SSN3YPL042C RPL8BP29453 256 aaKnown RBP10.52□□□□□ -0.73
SSN3YPL042C CHS3P29465 1165 aa10.52□□□□□ -0.73
SSN3YPL042C RPC37P36121 282 aa10.52□□□□□ -0.73
SSN3YPL042C YBL028CP38202 106 aa10.52□□□□□ -0.73
SSN3YPL042C CCM1P48237 864 aaPredicted RBP10.52□□□□□ -0.73
SSN3YPL042C SRP40P32583 406 aaPredicted RBP10.51□□□□□ -0.73
SSN3YPL042C KDX1P36005 433 aa10.51□□□□□ -0.73
SSN3YPL042C CST26P38226 397 aa10.51□□□□□ -0.73
SSN3YPL042C RSM25P40496 264 aa10.51□□□□□ -0.73
SSN3YPL042C CDC6P09119 513 aa10.5□□□□□ -0.73
SSN3YPL042C ACE2P21192 770 aa10.5□□□□□ -0.73
SSN3YPL042C KEL1P38853 1164 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C RVS167P39743 482 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C CCT5P40413 562 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C NIT1P40447 199 aa10.5□□□□□ -0.73
SSN3YPL042C PCI8P40512 444 aa10.5□□□□□ -0.73
SSN3YPL042C FOL1P53848 824 aa10.5□□□□□ -0.73
SSN3YPL042C REX2P54964 269 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C VPS30Q02948 557 aa10.5□□□□□ -0.73
SSN3YPL042C ISA1Q07821 250 aaPredicted RBP10.5□□□□□ -0.73
SSN3YPL042C APC2Q12440 853 aa10.5□□□□□ -0.73
SSN3YPL042C TUS1Q06412 1307 aa10.5□□□□□ -0.73
SSN3YPL042C NAT1P12945 854 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C FRS2P15625 503 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C SRP54P20424 541 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C NIP100P33420 868 aa10.5□□□□□ -0.73
SSN3YPL042C DOT6P40059 670 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C PEX21P50091 288 aa10.5□□□□□ -0.73
SSN3YPL042C KRE33P53914 1056 aaKnown RBP10.5□□□□□ -0.73
SSN3YPL042C DCS2Q12123 353 aa10.5□□□□□ -0.73
SSN3YPL042C APC11Q12157 165 aa10.5□□□□□ -0.73
SSN3YPL042C YVC1Q12324 675 aa10.5□□□□□ -0.73
SSN3YPL042C TUB2P02557 457 aaKnown RBP10.49□□□□□ -0.73
SSN3YPL042C APN1P22936 367 aa10.49□□□□□ -0.73
SSN3YPL042C YOR389WQ08912 624 aa10.49□□□□□ -0.73
SSN3YPL042C MET6P05694 767 aaKnown RBP10.48□□□□□ -0.73
SSN3YPL042C NUC1P08466 329 aa10.48□□□□□ -0.73
SSN3YPL042C VPS1P21576 704 aaKnown RBP10.48□□□□□ -0.73
SSN3YPL042C YKL091CP33324 310 aaKnown RBP10.48□□□□□ -0.73
SSN3YPL042C APE4P38821 490 aa10.48□□□□□ -0.73
SSN3YPL042C TOM71P38825 639 aaKnown RBP10.48□□□□□ -0.73
SSN3YPL042C YAP1801P38856 637 aa10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms