RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W CDC19P00549 500 aaKnown RBP9.54□□□□□ -0.88
AMF1YOR378W KNS1P32350 737 aaPredicted RBP9.54□□□□□ -0.88
AMF1YOR378W EUG1P32474 517 aa9.54□□□□□ -0.88
AMF1YOR378W ASH1P34233 588 aa9.54□□□□□ -0.88
AMF1YOR378W GAA1P39012 614 aa9.54□□□□□ -0.88
AMF1YOR378W SPR3P41901 512 aa9.54□□□□□ -0.88
AMF1YOR378W ORC4P54791 529 aa9.54□□□□□ -0.88
AMF1YOR378W SGD1Q06132 899 aa9.54□□□□□ -0.88
AMF1YOR378W RKM4Q12504 494 aa9.54□□□□□ -0.88
AMF1YOR378W ARP6Q12509 438 aa9.54□□□□□ -0.88
AMF1YOR378W ILV1P00927 576 aaKnown RBP9.53□□□□□ -0.88
AMF1YOR378W MCR1P36060 302 aaKnown RBP9.53□□□□□ -0.88
AMF1YOR378W ISW1P38144 1129 aa9.53□□□□□ -0.88
AMF1YOR378W UBA2P52488 636 aa9.53□□□□□ -0.88
AMF1YOR378W YGR125WP53273 1036 aa9.53□□□□□ -0.88
AMF1YOR378W VMS1Q04311 632 aaKnown RBP9.53□□□□□ -0.88
AMF1YOR378W DUS3Q06053 668 aaKnown RBP9.53□□□□□ -0.88
AMF1YOR378W SMC6Q12749 1114 aa9.53□□□□□ -0.88
AMF1YOR378W SHP1P34223 423 aa9.52□□□□□ -0.88
AMF1YOR378W MOT2P34909 587 aaKnown RBP9.52□□□□□ -0.88
AMF1YOR378W RKM3P38222 552 aa9.52□□□□□ -0.88
AMF1YOR378W RRM3P38766 723 aa9.52□□□□□ -0.88
AMF1YOR378W THI6P41835 540 aa9.52□□□□□ -0.88
AMF1YOR378W RSC1P53236 928 aa9.52□□□□□ -0.88
AMF1YOR378W YLR326WQ06170 240 aaKnown RBP9.52□□□□□ -0.88
AMF1YOR378W YLH47Q06493 454 aa9.52□□□□□ -0.88
AMF1YOR378W TY3A-GQ12173 290 aa9.52□□□□□ -0.88
AMF1YOR378W TIF6Q12522 245 aaKnown RBP9.52□□□□□ -0.88
AMF1YOR378W TY3A-IQ99219 290 aa9.52□□□□□ -0.88
AMF1YOR378W FOB1O13329 566 aa9.51□□□□□ -0.89
AMF1YOR378W TAF13P11747 167 aa9.51□□□□□ -0.89
AMF1YOR378W CKA2P19454 339 aa9.51□□□□□ -0.89
AMF1YOR378W CBK1P53894 756 aa9.51□□□□□ -0.89
AMF1YOR378W PTA1Q01329 785 aaPredicted RBP9.51□□□□□ -0.89
AMF1YOR378W ISA1Q07821 250 aaPredicted RBP9.51□□□□□ -0.89
AMF1YOR378W CDC15P27636 974 aa9.51□□□□□ -0.89
AMF1YOR378W HIR1P32479 840 aa9.51□□□□□ -0.89
AMF1YOR378W SAC6P32599 642 aaKnown RBP9.51□□□□□ -0.89
AMF1YOR378W VTC2P43585 828 aa9.51□□□□□ -0.89
AMF1YOR378W ROG3P43602 733 aa9.51□□□□□ -0.89
AMF1YOR378W CNM67P53865 581 aaKnown RBP9.51□□□□□ -0.89
AMF1YOR378W LCD1Q04377 747 aa9.51□□□□□ -0.89
AMF1YOR378W WHI4Q07655 649 aaKnown RBP9.51□□□□□ -0.89
AMF1YOR378W PSR2Q07949 397 aa9.51□□□□□ -0.89
AMF1YOR378W PGM1P33401 570 aaKnown RBP9.5□□□□□ -0.89
AMF1YOR378W PET10P36139 283 aa9.5□□□□□ -0.89
AMF1YOR378W ADY4Q05955 493 aa9.5□□□□□ -0.89
AMF1YOR378W YPR148CQ06523 435 aa9.5□□□□□ -0.89
AMF1YOR378W TKL1P23254 680 aaKnown RBP9.49□□□□□ -0.89
AMF1YOR378W GSY2P27472 705 aa9.49□□□□□ -0.89
AMF1YOR378W CLB5P30283 435 aa9.49□□□□□ -0.89
AMF1YOR378W SEC8P32855 1065 aa9.49□□□□□ -0.89
AMF1YOR378W VPS29P38759 282 aa9.49□□□□□ -0.89
AMF1YOR378W PHM6Q05637 104 aa9.49□□□□□ -0.89
AMF1YOR378W PGK1P00560 416 aaKnown RBP9.48□□□□□ -0.89
AMF1YOR378W ATE1P16639 503 aa9.48□□□□□ -0.89
AMF1YOR378W SRP40P32583 406 aaPredicted RBP9.48□□□□□ -0.89
AMF1YOR378W HUL5P53119 910 aa9.48□□□□□ -0.89
AMF1YOR378W FUS2Q05670 677 aa9.48□□□□□ -0.89
AMF1YOR378W DUS4Q06063 367 aa9.48□□□□□ -0.89
AMF1YOR378W ERP3Q12403 225 aa9.48□□□□□ -0.89
AMF1YOR378W ESS1P22696 170 aa9.47□□□□□ -0.89
AMF1YOR378W UBP11P36026 717 aa9.47□□□□□ -0.89
AMF1YOR378W REG2P38232 338 aa9.47□□□□□ -0.89
AMF1YOR378W GPD2P41911 440 aaKnown RBP9.47□□□□□ -0.89
AMF1YOR378W ATG1P53104 897 aa9.47□□□□□ -0.89
AMF1YOR378W PGA2P53903 129 aa9.47□□□□□ -0.89
AMF1YOR378W SLD5Q03406 294 aa9.47□□□□□ -0.89
AMF1YOR378W YLR225CQ05948 407 aaKnown RBP9.47□□□□□ -0.89
AMF1YOR378W YEL076C-AP0CX16 216 aa9.46□□□□□ -0.89
AMF1YOR378W YLR464WP0CX17 216 aa9.46□□□□□ -0.89
AMF1YOR378W MIP1P15801 1254 aa9.46□□□□□ -0.89
AMF1YOR378W ISY1P21374 235 aaPredicted RBP9.46□□□□□ -0.89
AMF1YOR378W MRPL10P36520 322 aa9.46□□□□□ -0.89
AMF1YOR378W NOC2P39744 710 aaKnown RBP9.46□□□□□ -0.89
AMF1YOR378W YEL076CP39971 216 aa9.46□□□□□ -0.89
AMF1YOR378W NUP82P40368 713 aa9.46□□□□□ -0.89
AMF1YOR378W FYV10P40492 516 aa9.46□□□□□ -0.89
AMF1YOR378W BRE2P43132 505 aa9.46□□□□□ -0.89
AMF1YOR378W CTR1P49573 406 aa9.46□□□□□ -0.89
AMF1YOR378W ZPR1P53303 486 aaKnown RBP9.46□□□□□ -0.89
AMF1YOR378W CLN3P13365 580 aa9.46□□□□□ -0.9
AMF1YOR378W SUV3P32580 737 aa9.46□□□□□ -0.9
AMF1YOR378W SIP3P38717 1229 aa9.46□□□□□ -0.9
AMF1YOR378W HMF1P40037 129 aaKnown RBP9.46□□□□□ -0.9
AMF1YOR378W UBP15P50101 1230 aa9.46□□□□□ -0.9
AMF1YOR378W DIP5P53388 608 aa9.46□□□□□ -0.9
AMF1YOR378W HCR1Q05775 265 aaKnown RBP9.46□□□□□ -0.9
AMF1YOR378W SRF1Q12516 437 aa9.46□□□□□ -0.9
AMF1YOR378W SRD1P09007 221 aa9.45□□□□□ -0.9
AMF1YOR378W SUP45P12385 437 aaKnown RBP9.45□□□□□ -0.9
AMF1YOR378W RAM2P29703 316 aa9.45□□□□□ -0.9
AMF1YOR378W TFC4P33339 1025 aa9.45□□□□□ -0.9
AMF1YOR378W MXR1P40029 184 aa9.45□□□□□ -0.9
AMF1YOR378W SSL2Q00578 843 aa9.45□□□□□ -0.9
AMF1YOR378W CRD1Q07560 283 aa9.45□□□□□ -0.9
AMF1YOR378W AFT2Q08957 416 aa9.45□□□□□ -0.9
AMF1YOR378W PRP22P24384 1145 aaKnown RBP9.44□□□□□ -0.9
AMF1YOR378W RGT1P32862 1170 aa9.44□□□□□ -0.9
AMF1YOR378W ADE17P38009 592 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 76.9 ms