RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	MSH3	P25336	1018 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	NFS1	P25374	497 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	YBR184W	P38299	523 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	YHR020W	P38708	688 aa	Known RBP	5.08	□□□□□ -1.6
CAF20	YOR276W	MNN1	P39106	762 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
CAF20	YOR276W	POB3	Q04636	552 aa	Known RBP	5.08	□□□□□ -1.6
CAF20	YOR276W	ESC2	Q06340	456 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	FLC1	Q08967	793 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	YVC1	Q12324	675 aa		5.08	□□□□□ -1.6
CAF20	YOR276W	TRP2	P00899	507 aa	Known RBP	5.07	□□□□□ -1.6
CAF20	YOR276W	HEM13	P11353	328 aa	Known RBP	5.07	□□□□□ -1.6
CAF20	YOR276W	PHO8	P11491	566 aa		5.07	□□□□□ -1.6
CAF20	YOR276W	SEC23	P15303	768 aa	Known RBP	5.07	□□□□□ -1.6
CAF20	YOR276W	ADP1	P25371	1049 aa		5.07	□□□□□ -1.6
CAF20	YOR276W	ABD1	P32783	436 aa	Predicted RBP	5.07	□□□□□ -1.6
CAF20	YOR276W	STE5	P32917	917 aa		5.07	□□□□□ -1.6
CAF20	YOR276W	EXO5	P38289	585 aa		5.07	□□□□□ -1.6
CAF20	YOR276W	PRP43	P53131	767 aa	Known RBP	5.07	□□□□□ -1.6
CAF20	YOR276W	YGR125W	P53273	1036 aa		5.07	□□□□□ -1.6
CAF20	YOR276W	ELA1	P53861	379 aa	Predicted RBP	5.07	□□□□□ -1.6
CAF20	YOR276W	TRE1	Q08919	783 aa		5.07	□□□□□ -1.6
CAF20	YOR276W	NNK1	P36003	928 aa		5.06	□□□□□ -1.6
CAF20	YOR276W	PEX7	P39108	375 aa		5.06	□□□□□ -1.6
CAF20	YOR276W	NOG1	Q02892	647 aa	Known RBP	5.06	□□□□□ -1.6
CAF20	YOR276W	YLR225C	Q05948	407 aa	Known RBP	5.06	□□□□□ -1.6
CAF20	YOR276W	AVO1	Q08236	1176 aa		5.06	□□□□□ -1.6
CAF20	YOR276W	OSH2	Q12451	1283 aa		5.06	□□□□□ -1.6
CAF20	YOR276W	DED1	P06634	604 aa	Known RBP	5.05	□□□□□ -1.6
CAF20	YOR276W	GAS1	P22146	559 aa	Known RBP	5.05	□□□□□ -1.6
CAF20	YOR276W	TSA1	P34760	196 aa	Known RBP	5.05	□□□□□ -1.6
CAF20	YOR276W	RER2	P35196	286 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	YKL077W	P36081	392 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	SHU2	P38957	223 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	HXT13	P39924	564 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	RSP5	P39940	809 aa	Known RBP	5.05	□□□□□ -1.6
CAF20	YOR276W	CHZ1	P40019	153 aa	Predicted RBP	5.05	□□□□□ -1.6
CAF20	YOR276W	HXT17	P53631	564 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	SIW14	P53965	281 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	HXT15	P54854	567 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	ROD1	Q02805	837 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	SSY1	Q03770	852 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	SPO20	Q04359	397 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	CDA2	Q06703	312 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	SPO75	Q07798	868 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	YLR125W	Q12138	136 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	YGR161W-C	Q3E744	92 aa		5.05	□□□□□ -1.6
CAF20	YOR276W	ERR1	P0CX10	437 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	ERR2	P0CX11	437 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	AGP1	P25376	633 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	RPL8B	P29453	256 aa	Known RBP	5.04	□□□□□ -1.6
CAF20	YOR276W	THI4	P32318	326 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	LYP1	P32487	611 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	MOT2	P34909	587 aa	Known RBP	5.04	□□□□□ -1.6
CAF20	YOR276W	VBA5	P36172	582 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	SLS1	P42900	643 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	YJR142W	P47173	342 aa		5.04	□□□□□ -1.6
CAF20	YOR276W	LPX1	Q12405	387 aa	Known RBP	5.04	□□□□□ -1.6
CAF20	YOR276W	TAF13	P11747	167 aa		5.03	□□□□□ -1.6
CAF20	YOR276W	HSP60	P19882	572 aa	Known RBP	5.03	□□□□□ -1.6
CAF20	YOR276W	PRO1	P32264	428 aa		5.03	□□□□□ -1.6
CAF20	YOR276W	NEM1	P38757	446 aa		5.03	□□□□□ -1.6
CAF20	YOR276W	FMP25	Q08023	583 aa		5.03	□□□□□ -1.6
CAF20	YOR276W	GAL11	P19659	1081 aa		5.02	□□□□□ -1.61
CAF20	YOR276W	SBA1	P28707	216 aa	Known RBP	5.02	□□□□□ -1.61
CAF20	YOR276W	MRP8	P35719	219 aa		5.02	□□□□□ -1.61
CAF20	YOR276W	RDH54	P38086	958 aa		5.02	□□□□□ -1.61
CAF20	YOR276W	IRR1	P40541	1150 aa		5.02	□□□□□ -1.61
CAF20	YOR276W	SHE9	Q04172	456 aa		5.02	□□□□□ -1.61
CAF20	YOR276W	EAF1	Q06337	982 aa		5.02	□□□□□ -1.61
CAF20	YOR276W	PUS7	Q08647	676 aa	Known RBP	5.02	□□□□□ -1.61
CAF20	YOR276W	CIT1	P00890	479 aa		5.01	□□□□□ -1.61
CAF20	YOR276W	CAN1	P04817	590 aa		5.01	□□□□□ -1.61
CAF20	YOR276W	INO1	P11986	533 aa		5.01	□□□□□ -1.61
CAF20	YOR276W	ARE1	P25628	610 aa		5.01	□□□□□ -1.61
CAF20	YOR276W	KRI1	P42846	591 aa	Known RBP	5.01	□□□□□ -1.61
CAF20	YOR276W	PFD1	P46988	109 aa		5.01	□□□□□ -1.61
CAF20	YOR276W	YJR008W	P47085	338 aa		5.01	□□□□□ -1.61
CAF20	YOR276W	VMA4	P22203	233 aa	Known RBP	5	□□□□□ -1.61
CAF20	YOR276W	YCR015C	P25616	317 aa		5	□□□□□ -1.61
CAF20	YOR276W	MKK2	P32491	506 aa		5	□□□□□ -1.61
CAF20	YOR276W	PTC7	P38797	343 aa		5	□□□□□ -1.61
CAF20	YOR276W	YAR028W	P39548	234 aa		5	□□□□□ -1.61
CAF20	YOR276W	MTR4	P47047	1073 aa	Known RBP	5	□□□□□ -1.61
CAF20	YOR276W	ERP6	P53198	216 aa		5	□□□□□ -1.61
CAF20	YOR276W	TPP1	Q03796	238 aa		5	□□□□□ -1.61
CAF20	YOR276W	EST2	Q06163	884 aa		5	□□□□□ -1.61
CAF20	YOR276W	UBX5	Q06682	500 aa		5	□□□□□ -1.61
CAF20	YOR276W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
CAF20	YOR276W	TOM20	P35180	183 aa		4.99	□□□□□ -1.61
CAF20	YOR276W	GGA2	P38817	585 aa	Known RBP	4.99	□□□□□ -1.61
CAF20	YOR276W	RAT1	Q02792	1006 aa	Known RBP	4.99	□□□□□ -1.61
CAF20	YOR276W	TIF35	Q04067	274 aa	Known RBP	4.99	□□□□□ -1.61
CAF20	YOR276W	UTP5	Q04177	643 aa	Known RBP	4.99	□□□□□ -1.61
CAF20	YOR276W	UTP14	Q04500	899 aa	Known RBP	4.99	□□□□□ -1.61
CAF20	YOR276W	SSB1	P11484	613 aa	Known RBP	4.98	□□□□□ -1.61
CAF20	YOR276W	RET1	P22276	1149 aa	Known RBP	4.98	□□□□□ -1.61
CAF20	YOR276W	SYP1	P25623	870 aa	Known RBP	4.98	□□□□□ -1.61
CAF20	YOR276W	GRX4	P32642	244 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	THI80	P35202	319 aa		4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 124.1 ms