RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W RTC4P53850 401 aa9.5□□□□□ -0.89
SFL1YOR140W RTG2P32608 588 aaKnown RBP9.5□□□□□ -0.89
SFL1YOR140W SHM1P37292 490 aaPredicted RBP9.5□□□□□ -0.89
SFL1YOR140W ADE17P38009 592 aaKnown RBP9.5□□□□□ -0.89
SFL1YOR140W RTT107P38850 1070 aa9.5□□□□□ -0.89
SFL1YOR140W PNT1P38969 423 aa9.5□□□□□ -0.89
SFL1YOR140W VHR2P40041 505 aa9.5□□□□□ -0.89
SFL1YOR140W CTR1P49573 406 aa9.5□□□□□ -0.89
SFL1YOR140W FMS1P50264 508 aa9.5□□□□□ -0.89
SFL1YOR140W TPO2P53283 614 aa9.5□□□□□ -0.89
SFL1YOR140W PEX29Q03370 554 aa9.5□□□□□ -0.89
SFL1YOR140W CSR2Q12734 1121 aa9.5□□□□□ -0.89
SFL1YOR140W PHR1P05066 565 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
SFL1YOR140W RPL22AP05749 121 aaKnown RBP9.49□□□□□ -0.89
SFL1YOR140W SAS3P34218 831 aa9.49□□□□□ -0.89
SFL1YOR140W YET1P35723 206 aa9.49□□□□□ -0.89
SFL1YOR140W SUL1P38359 859 aa9.49□□□□□ -0.89
SFL1YOR140W BRL1P38770 471 aa9.49□□□□□ -0.89
SFL1YOR140W PDC1P06169 563 aaKnown RBP9.49□□□□□ -0.89
SFL1YOR140W FBP1P09201 348 aa9.49□□□□□ -0.89
SFL1YOR140W MCM1P11746 286 aa9.49□□□□□ -0.89
SFL1YOR140W ISW1P38144 1129 aa9.49□□□□□ -0.89
SFL1YOR140W PAN5P38787 379 aa9.49□□□□□ -0.89
SFL1YOR140W LSB1P53281 241 aa9.49□□□□□ -0.89
SFL1YOR140W YEL076C-AP0CX16 216 aa9.48□□□□□ -0.89
SFL1YOR140W YLR464WP0CX17 216 aa9.48□□□□□ -0.89
SFL1YOR140W TPS3P38426 1054 aaKnown RBP9.48□□□□□ -0.89
SFL1YOR140W GAA1P39012 614 aa9.48□□□□□ -0.89
SFL1YOR140W YEL076CP39971 216 aa9.48□□□□□ -0.89
SFL1YOR140W RAD26P40352 1085 aa9.48□□□□□ -0.89
SFL1YOR140W THI6P41835 540 aa9.48□□□□□ -0.89
SFL1YOR140W ATG36P46983 293 aa9.48□□□□□ -0.89
SFL1YOR140W CSM3Q04659 317 aa9.48□□□□□ -0.89
SFL1YOR140W GFD1Q04839 188 aaKnown RBP9.48□□□□□ -0.89
SFL1YOR140W HCR1Q05775 265 aaKnown RBP9.48□□□□□ -0.89
SFL1YOR140W TLG2Q08144 397 aa9.48□□□□□ -0.89
SFL1YOR140W APL4Q12028 832 aa9.48□□□□□ -0.89
SFL1YOR140W RPS6AP0CX37 236 aaKnown RBP9.48□□□□□ -0.89
SFL1YOR140W RPS6BP0CX38 236 aaPredicted RBP9.48□□□□□ -0.89
SFL1YOR140W ISY1P21374 235 aaPredicted RBP9.48□□□□□ -0.89
SFL1YOR140W LTV1P34078 463 aa9.48□□□□□ -0.89
SFL1YOR140W RRP14P36080 434 aaKnown RBP9.48□□□□□ -0.89
SFL1YOR140W SIC1P38634 284 aa9.48□□□□□ -0.89
SFL1YOR140W TPM2P40414 161 aa9.48□□□□□ -0.89
SFL1YOR140W MGA2P40578 1113 aa9.48□□□□□ -0.89
SFL1YOR140W CBK1P53894 756 aa9.48□□□□□ -0.89
SFL1YOR140W SPP382Q06411 708 aaPredicted RBP9.48□□□□□ -0.89
SFL1YOR140W FKS1P38631 1876 aaKnown RBP9.47□□□□□ -0.89
SFL1YOR140W ILV1P00927 576 aaKnown RBP9.47□□□□□ -0.89
SFL1YOR140W GSY1P23337 708 aa9.47□□□□□ -0.89
SFL1YOR140W SEC65P29478 273 aa9.47□□□□□ -0.89
SFL1YOR140W AIP1P46680 615 aaKnown RBP9.47□□□□□ -0.89
SFL1YOR140W EBS1Q03466 884 aaKnown RBP9.47□□□□□ -0.89
SFL1YOR140W CDC37P06101 506 aaKnown RBP9.47□□□□□ -0.89
SFL1YOR140W PHO88P38264 188 aaPredicted RBP9.47□□□□□ -0.89
SFL1YOR140W SEC9P40357 651 aa9.47□□□□□ -0.89
SFL1YOR140W ULP2P40537 1034 aaPredicted RBP9.47□□□□□ -0.89
SFL1YOR140W YML037CQ03703 340 aa9.47□□□□□ -0.89
SFL1YOR140W TMA64Q04600 565 aaKnown RBP9.47□□□□□ -0.89
SFL1YOR140W PUS5Q06244 254 aa9.47□□□□□ -0.89
SFL1YOR140W SAM1P10659 382 aaKnown RBP9.46□□□□□ -0.9
SFL1YOR140W MRC1P25588 1096 aa9.46□□□□□ -0.9
SFL1YOR140W PCH2P38126 564 aa9.46□□□□□ -0.9
SFL1YOR140W TFG2P41896 400 aaPredicted RBP9.46□□□□□ -0.9
SFL1YOR140W BRE2P43132 505 aa9.46□□□□□ -0.9
SFL1YOR140W OSW7P43611 510 aa9.46□□□□□ -0.9
SFL1YOR140W ARP6Q12509 438 aa9.46□□□□□ -0.9
SFL1YOR140W RAD18P10862 487 aa9.45□□□□□ -0.9
SFL1YOR140W CBF5P33322 483 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
SFL1YOR140W RPC25P35718 212 aa9.45□□□□□ -0.9
SFL1YOR140W PES4P39684 611 aa9.45□□□□□ -0.9
SFL1YOR140W VTC2P43585 828 aa9.45□□□□□ -0.9
SFL1YOR140W YJL007CP47080 104 aa9.45□□□□□ -0.9
SFL1YOR140W DIP5P53388 608 aa9.45□□□□□ -0.9
SFL1YOR140W ORC4P54791 529 aa9.45□□□□□ -0.9
SFL1YOR140W YLH47Q06493 454 aa9.45□□□□□ -0.9
SFL1YOR140W FOB1O13329 566 aa9.45□□□□□ -0.9
SFL1YOR140W TY1B-AO13527 1196 aaKnown RBP9.45□□□□□ -0.9
SFL1YOR140W ERG12P07277 443 aa9.45□□□□□ -0.9
SFL1YOR140W MIP1P15801 1254 aa9.45□□□□□ -0.9
SFL1YOR140W PXL1P36166 706 aa9.45□□□□□ -0.9
SFL1YOR140W PIH1P38768 344 aa9.45□□□□□ -0.9
SFL1YOR140W SPT8P38915 602 aa9.45□□□□□ -0.9
SFL1YOR140W VPS75P53853 264 aa9.45□□□□□ -0.9
SFL1YOR140W PRP3Q03338 469 aaPredicted RBP9.45□□□□□ -0.9
SFL1YOR140W VPS72Q03388 795 aa9.45□□□□□ -0.9
SFL1YOR140W SMC6Q12749 1114 aa9.45□□□□□ -0.9
SFL1YOR140W RRP43P25359 394 aaPredicted RBP9.44□□□□□ -0.9
SFL1YOR140W PWP2P25635 923 aaKnown RBP9.44□□□□□ -0.9
SFL1YOR140W RAM2P29703 316 aa9.44□□□□□ -0.9
SFL1YOR140W PEA2P40091 420 aa9.44□□□□□ -0.9
SFL1YOR140W YGL039WP53183 348 aaKnown RBP9.44□□□□□ -0.9
SFL1YOR140W PGA2P53903 129 aa9.44□□□□□ -0.9
SFL1YOR140W WHI4Q07655 649 aaKnown RBP9.44□□□□□ -0.9
SFL1YOR140W YKL091CP33324 310 aaKnown RBP9.44□□□□□ -0.9
SFL1YOR140W SHP1P34223 423 aa9.44□□□□□ -0.9
SFL1YOR140W BCD1P38772 366 aa9.44□□□□□ -0.9
SFL1YOR140W GUP1P53154 560 aa9.44□□□□□ -0.9
SFL1YOR140W SOL4P53315 255 aa9.44□□□□□ -0.9
SFL1YOR140W BUL2Q03758 920 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms