RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS17	YOR132W	MLS1	P30952	554 aa		4.93	□□□□□ -1.62
VPS17	YOR132W	LYP1	P32487	611 aa		4.93	□□□□□ -1.62
VPS17	YOR132W	RPN3	P40016	523 aa	Known RBP	4.93	□□□□□ -1.62
VPS17	YOR132W	NOP7	P53261	605 aa	Known RBP	4.93	□□□□□ -1.62
VPS17	YOR132W	CWC24	P53769	259 aa		4.93	□□□□□ -1.62
VPS17	YOR132W	HOS3	Q02959	697 aa	Known RBP	4.93	□□□□□ -1.62
VPS17	YOR132W	TY1B-DR4	Q07793	1604 aa		4.93	□□□□□ -1.62
VPS17	YOR132W	COQ4	O13525	335 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	PTC7	P38797	343 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	GPB2	P39717	880 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	HNT2	P49775	206 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	TYW3	P53177	273 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	YGR053C	P53234	283 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	TNA1	P53322	534 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	EEB1	Q02891	456 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	GDE1	Q02979	1223 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
VPS17	YOR132W	TIF35	Q04067	274 aa	Known RBP	4.92	□□□□□ -1.62
VPS17	YOR132W	TRP2	P00899	507 aa	Known RBP	4.92	□□□□□ -1.62
VPS17	YOR132W	MCM7	P38132	845 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	MPH1	P40562	993 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	GTS1	P40956	396 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	AOS1	Q06624	347 aa		4.92	□□□□□ -1.62
VPS17	YOR132W	NBA1	Q08229	501 aa	Known RBP	4.92	□□□□□ -1.62
VPS17	YOR132W	FAA4	P47912	694 aa	Known RBP	4.91	□□□□□ -1.62
VPS17	YOR132W	SPO20	Q04359	397 aa		4.91	□□□□□ -1.62
VPS17	YOR132W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
VPS17	YOR132W	SEA4	P38164	1038 aa		4.9	□□□□□ -1.62
VPS17	YOR132W	CCZ1	P38273	704 aa		4.9	□□□□□ -1.62
VPS17	YOR132W	KRI1	P42846	591 aa	Known RBP	4.9	□□□□□ -1.62
VPS17	YOR132W	ORC3	P54790	616 aa		4.9	□□□□□ -1.62
VPS17	YOR132W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
VPS17	YOR132W	YER152C	P10356	443 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	HSP78	P33416	811 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	BAP2	P38084	609 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	RSC58	Q07979	502 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	GNT1	Q12096	491 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	PIK1	P39104	1066 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	SNF7	P39929	240 aa	Known RBP	4.89	□□□□□ -1.63
VPS17	YOR132W	LPX1	Q12405	387 aa	Known RBP	4.89	□□□□□ -1.63
VPS17	YOR132W	RKM4	Q12504	494 aa		4.89	□□□□□ -1.63
VPS17	YOR132W	INO1	P11986	533 aa		4.88	□□□□□ -1.63
VPS17	YOR132W	AIM26	P32858	118 aa		4.88	□□□□□ -1.63
VPS17	YOR132W	FOL2	P51601	243 aa	Known RBP	4.88	□□□□□ -1.63
VPS17	YOR132W	RCL1	Q08096	367 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS17	YOR132W	RSB1	Q08417	382 aa		4.88	□□□□□ -1.63
VPS17	YOR132W	SNF5	P18480	905 aa		4.87	□□□□□ -1.63
VPS17	YOR132W	MOT2	P34909	587 aa	Known RBP	4.87	□□□□□ -1.63
VPS17	YOR132W	POL12	P38121	705 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS17	YOR132W	VAC8	P39968	578 aa		4.87	□□□□□ -1.63
VPS17	YOR132W	ALD6	P54115	500 aa	Known RBP	4.87	□□□□□ -1.63
VPS17	YOR132W	YLR225C	Q05948	407 aa	Known RBP	4.87	□□□□□ -1.63
VPS17	YOR132W	FAL1	Q12099	399 aa	Known RBP	4.87	□□□□□ -1.63
VPS17	YOR132W	SPS1	P08458	490 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	BAS1	P22035	811 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	YKL107W	P34251	309 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	ECL1	P48235	211 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	SPP382	Q06411	708 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS17	YOR132W	DFG16	Q99234	619 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	HSL1	P34244	1518 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	YGL176C	P46945	554 aa		4.86	□□□□□ -1.63
VPS17	YOR132W	RPL11A	P0C0W9	174 aa	Known RBP	4.85	□□□□□ -1.63
VPS17	YOR132W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
VPS17	YOR132W	LRG1	P35688	1017 aa		4.85	□□□□□ -1.63
VPS17	YOR132W	ENV11	P53246	860 aa		4.85	□□□□□ -1.63
VPS17	YOR132W	OPI10	Q08202	246 aa		4.85	□□□□□ -1.63
VPS17	YOR132W	RPL11B	Q3E757	174 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS17	YOR132W	AGP1	P25376	633 aa		4.84	□□□□□ -1.63
VPS17	YOR132W	MXR1	P40029	184 aa		4.84	□□□□□ -1.63
VPS17	YOR132W	YPL066W	Q12194	479 aa		4.84	□□□□□ -1.63
VPS17	YOR132W	SBA1	P28707	216 aa	Known RBP	4.83	□□□□□ -1.64
VPS17	YOR132W	ABD1	P32783	436 aa	Predicted RBP	4.83	□□□□□ -1.64
VPS17	YOR132W	PNT1	P38969	423 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	GEM1	P39722	662 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	SEC26	P41810	973 aa	Known RBP	4.83	□□□□□ -1.64
VPS17	YOR132W	YFL054C	P43549	646 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	ACM1	Q08981	209 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	SPT6	P23615	1451 aa	Known RBP	4.83	□□□□□ -1.64
VPS17	YOR132W	PRI2	P20457	528 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	AVT1	P47082	602 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	ESC2	Q06340	456 aa		4.83	□□□□□ -1.64
VPS17	YOR132W	THS1	P04801	734 aa	Known RBP	4.82	□□□□□ -1.64
VPS17	YOR132W	DBP2	P24783	546 aa	Known RBP	4.82	□□□□□ -1.64
VPS17	YOR132W	UGA2	P38067	497 aa		4.82	□□□□□ -1.64
VPS17	YOR132W	WRS1	Q12109	432 aa	Known RBP	4.82	□□□□□ -1.64
VPS17	YOR132W	SEG2	P34250	1132 aa		4.81	□□□□□ -1.64
VPS17	YOR132W	SIP5	P40210	489 aa	Known RBP	4.81	□□□□□ -1.64
VPS17	YOR132W	SHE9	Q04172	456 aa		4.81	□□□□□ -1.64
VPS17	YOR132W	VBA5	P36172	582 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	RFC5	P38251	354 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	ETP1	P38748	585 aa	Known RBP	4.8	□□□□□ -1.64
VPS17	YOR132W	ATG13	Q06628	738 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	SVS1	Q12254	260 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	SLA2	P33338	968 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	YKL069W	P36088	180 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	RSM24	Q03976	319 aa		4.8	□□□□□ -1.64
VPS17	YOR132W	TDA5	Q06417	326 aa	Known RBP	4.8	□□□□□ -1.64
VPS17	YOR132W	MON2	P48563	1636 aa	Predicted RBP	4.79	□□□□□ -1.64
VPS17	YOR132W	ELM1	P32801	640 aa		4.79	□□□□□ -1.64
VPS17	YOR132W	MRP8	P35719	219 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms