RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	NNF2	P53253	936 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	ARP5	P53946	755 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	HRP1	Q99383	534 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	GAL11	P19659	1081 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	RAD54	P32863	898 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	TIM23	P32897	222 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	NTH2	P35172	780 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	CCC2	P38995	1004 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	FMP10	P40098	244 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	YJL045W	P47052	634 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	TEA1	P47988	759 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	OCA1	P50946	238 aa	Predicted RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	SLT2	Q00772	484 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	MMR1	Q06324	491 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	WHI5	Q12416	295 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	SWI1	P09547	1314 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	PET111	P08468	800 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	KAR2	P16474	682 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	ARG8	P18544	423 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	YUR1	P26725	428 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	SMY2	P32909	740 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	RTG3	P38165	486 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	SIC1	P38634	284 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	NMD2	P38798	1089 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	RPL34B	P40525	121 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	YNR021W	P53723	404 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	NSE3	Q05541	303 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	RPN7	Q06103	429 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	NCB2	Q92317	146 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	ELM1	P32801	640 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	MMS21	P38632	267 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	OSH3	P38713	996 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	YLF2	P38746	405 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	MGA2	P40578	1113 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	RMT2	Q03305	412 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	YLR257W	Q06146	321 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	PIG1	Q06216	648 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	YLL054C	Q12244	843 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	BMT6	Q12291	365 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	MSB2	P32334	1306 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	SEC23	P15303	768 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	PHO87	P25360	923 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	DEP1	P31385	405 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	OCA5	P38738	679 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	1.7	□□□□□ -2.14	not detected
SSK2	YNR031C	YFL034W	P43564	1073 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	YNR061C	P53747	219 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	ORC3	P54790	616 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	RPL34A	P87262	121 aa	Predicted RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	RCF1	Q03713	159 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	MRD1	Q06106	887 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	SMD2	Q06217	110 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	YDL129W	Q07555	291 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	GUD1	Q07729	489 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	TFB4	Q12004	338 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	LAM1	P38851	1228 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	UTP7	P40055	554 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	HOS4	P40480	1083 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	GIR2	Q03768	265 aa	Predicted RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	MSH6	Q03834	1242 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	JIP5	Q06214	492 aa	Predicted RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	NCR1	Q12200	1170 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	CYB2	P00175	591 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	HSP82	P02829	709 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	KIN1	P13185	1064 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	PKC1	P24583	1151 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	POL4	P25615	582 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	SEC61	P32915	480 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	KTR2	P33550	425 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	GPT2	P36148	743 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	YBL036C	P38197	257 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	HAL5	P38970	855 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	REX2	P54964	269 aa	Known RBP	1.7	□□□□□ -2.14
SSK2	YNR031C	HAP5	Q02516	242 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	VPS13	Q07878	3144 aa		1.7	□□□□□ -2.14
SSK2	YNR031C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	1.69	□□□□□ -2.14	not detected
SSK2	YNR031C	PRP9	P19736	530 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	EDS1	P38073	919 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	OPY1	P38271	328 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	SOL3	P38858	249 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	PHM8	P40025	321 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	RTS3	P53289	263 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	RPL22B	P56628	122 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	ERV41	Q04651	352 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	UBX5	Q06682	500 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	YOR059C	Q08448	450 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	HAT1	Q12341	374 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	MBR1	P23493	339 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	ACP1	P32463	125 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	RPN2	P32565	945 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	YKL023W	P36103	277 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	VPS27	P40343	622 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	THI6	P41835	540 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	SPO74	P45819	413 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	LSC1	P53598	329 aa	Known RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	PEX29	Q03370	554 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	APC11	Q12157	165 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	SNU66	Q12420	587 aa	Predicted RBP	1.69	□□□□□ -2.14
SSK2	YNR031C	YCL042W	P25572	119 aa		1.69	□□□□□ -2.14
SSK2	YNR031C	SAP190	P36123	1033 aa		1.69	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms