RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C CKI1P20485 582 aa9.48□□□□□ -0.89
RPD3YNL330C CLB5P30283 435 aa9.48□□□□□ -0.89
RPD3YNL330C CNS1P33313 385 aa9.48□□□□□ -0.89
RPD3YNL330C MUD2P36084 527 aaKnown RBP9.48□□□□□ -0.89
RPD3YNL330C ERG7P38604 731 aa9.48□□□□□ -0.89
RPD3YNL330C MDM1Q01846 1127 aa9.48□□□□□ -0.89
RPD3YNL330C UME1Q03010 460 aa9.48□□□□□ -0.89
RPD3YNL330C CSM3Q04659 317 aa9.48□□□□□ -0.89
RPD3YNL330C OPY2Q06810 360 aa9.48□□□□□ -0.89
RPD3YNL330C FLO1P32768 1537 aa9.47□□□□□ -0.89
RPD3YNL330C CKA2P19454 339 aa9.47□□□□□ -0.89
RPD3YNL330C SMC2P38989 1170 aaKnown RBP9.47□□□□□ -0.89
RPD3YNL330C PUS6P53294 404 aa9.47□□□□□ -0.89
RPD3YNL330C DSE4P53753 1117 aa9.47□□□□□ -0.89
RPD3YNL330C BNI5P53890 448 aaKnown RBP9.47□□□□□ -0.89
RPD3YNL330C VPS30Q02948 557 aa9.47□□□□□ -0.89
RPD3YNL330C GYL1Q04322 720 aa9.47□□□□□ -0.89
RPD3YNL330C TOP1P04786 769 aa9.46□□□□□ -0.9
RPD3YNL330C SRP54P20424 541 aaKnown RBP9.46□□□□□ -0.9
RPD3YNL330C RAD57P25301 460 aa9.46□□□□□ -0.9
RPD3YNL330C YKL091CP33324 310 aaKnown RBP9.46□□□□□ -0.9
RPD3YNL330C RPC25P35718 212 aa9.46□□□□□ -0.9
RPD3YNL330C SMF1P38925 575 aa9.46□□□□□ -0.9
RPD3YNL330C CTK3P46963 296 aaPredicted RBP9.46□□□□□ -0.9
RPD3YNL330C YGL140CP53120 1219 aa9.46□□□□□ -0.9
RPD3YNL330C FOL1P53848 824 aa9.46□□□□□ -0.9
RPD3YNL330C NSG2P53898 299 aa9.46□□□□□ -0.9
RPD3YNL330C OMS1Q06668 471 aa9.46□□□□□ -0.9
RPD3YNL330C YOL075CQ08234 1294 aa9.46□□□□□ -0.9
RPD3YNL330C RUD3Q12234 484 aaKnown RBP9.46□□□□□ -0.9
RPD3YNL330C PMD1P32634 1753 aa9.46□□□□□ -0.9
RPD3YNL330C ARG82P07250 355 aa9.45□□□□□ -0.9
RPD3YNL330C PPR1P07272 904 aaPredicted RBP9.45□□□□□ -0.9
RPD3YNL330C MIP1P15801 1254 aa9.45□□□□□ -0.9
RPD3YNL330C RPC53P25441 422 aa9.45□□□□□ -0.9
RPD3YNL330C PDC6P26263 563 aaKnown RBP9.45□□□□□ -0.9
RPD3YNL330C SEC20P28791 383 aa9.45□□□□□ -0.9
RPD3YNL330C PET10P36139 283 aa9.45□□□□□ -0.9
RPD3YNL330C UGA2P38067 497 aa9.45□□□□□ -0.9
RPD3YNL330C HUL4P40985 892 aa9.45□□□□□ -0.9
RPD3YNL330C ERO1Q03103 563 aa9.45□□□□□ -0.9
RPD3YNL330C NGL3Q03210 505 aa9.45□□□□□ -0.9
RPD3YNL330C PRP42Q03776 544 aaKnown RBP9.45□□□□□ -0.9
RPD3YNL330C NOP6Q07623 225 aaKnown RBP9.45□□□□□ -0.9
RPD3YNL330C SPO75Q07798 868 aa9.45□□□□□ -0.9
RPD3YNL330C CWC2Q12046 339 aaPredicted RBP9.45□□□□□ -0.9
RPD3YNL330C NUR1Q12066 484 aa9.45□□□□□ -0.9
RPD3YNL330C TOM70P07213 617 aaKnown RBP9.44□□□□□ -0.9
RPD3YNL330C NUC1P08466 329 aa9.44□□□□□ -0.9
RPD3YNL330C ATG32P40458 529 aa9.44□□□□□ -0.9
RPD3YNL330C RSM7P47150 247 aa9.44□□□□□ -0.9
RPD3YNL330C VTC3Q02725 835 aa9.44□□□□□ -0.9
RPD3YNL330C HKR1P41809 1802 aa9.44□□□□□ -0.9
RPD3YNL330C ACE2P21192 770 aa9.43□□□□□ -0.9
RPD3YNL330C HXT1P32465 570 aa9.43□□□□□ -0.9
RPD3YNL330C SLX5P32828 619 aaKnown RBP9.43□□□□□ -0.9
RPD3YNL330C MAD1P40957 749 aa9.43□□□□□ -0.9
RPD3YNL330C CBK1P53894 756 aa9.43□□□□□ -0.9
RPD3YNL330C ADY4Q05955 493 aa9.43□□□□□ -0.9
RPD3YNL330C DAS2Q12084 232 aa9.43□□□□□ -0.9
RPD3YNL330C SMC6Q12749 1114 aa9.43□□□□□ -0.9
RPD3YNL330C CDC8P00572 216 aa9.42□□□□□ -0.9
RPD3YNL330C MAK16P10962 306 aaPredicted RBP9.42□□□□□ -0.9
RPD3YNL330C SSB1P11484 613 aaKnown RBP9.42□□□□□ -0.9
RPD3YNL330C ISY1P21374 235 aaPredicted RBP9.42□□□□□ -0.9
RPD3YNL330C SRM1P21827 482 aa9.42□□□□□ -0.9
RPD3YNL330C RET1P22276 1149 aaKnown RBP9.42□□□□□ -0.9
RPD3YNL330C PRE8P23639 250 aa9.42□□□□□ -0.9
RPD3YNL330C GDT1P38301 280 aaPredicted RBP9.42□□□□□ -0.9
RPD3YNL330C SSB2P40150 613 aaKnown RBP9.42□□□□□ -0.9
RPD3YNL330C IES1P43579 692 aa9.42□□□□□ -0.9
RPD3YNL330C CIT3P43635 486 aa9.42□□□□□ -0.9
RPD3YNL330C ASE1P50275 885 aa9.42□□□□□ -0.9
RPD3YNL330C POB3Q04636 552 aaKnown RBP9.42□□□□□ -0.9
RPD3YNL330C SOV1Q04748 898 aa9.42□□□□□ -0.9
RPD3YNL330C ACK1Q07622 623 aaPredicted RBP9.42□□□□□ -0.9
RPD3YNL330C YOL087CQ99247 1116 aa9.42□□□□□ -0.9
RPD3YNL330C MYO1P08964 1928 aa9.41□□□□□ -0.9
RPD3YNL330C RPL8AP17076 256 aaKnown RBP9.41□□□□□ -0.9
RPD3YNL330C BUD31P25337 157 aaPredicted RBP9.41□□□□□ -0.9
RPD3YNL330C APL1P27351 700 aa9.41□□□□□ -0.9
RPD3YNL330C SMY1P32364 656 aaKnown RBP9.41□□□□□ -0.9
RPD3YNL330C SLD2P34252 453 aa9.41□□□□□ -0.9
RPD3YNL330C RGD1P38339 666 aa9.41□□□□□ -0.9
RPD3YNL330C GSM1P42950 618 aa9.41□□□□□ -0.9
RPD3YNL330C MIC19P43594 170 aa9.41□□□□□ -0.9
RPD3YNL330C VIP1Q06685 1146 aaKnown RBP9.41□□□□□ -0.9
RPD3YNL330C YPL216WQ08964 1102 aa9.41□□□□□ -0.9
RPD3YNL330C PCL8Q08966 492 aa9.41□□□□□ -0.9
RPD3YNL330C GRX6Q12438 231 aa9.41□□□□□ -0.9
RPD3YNL330C RMP1Q12530 201 aa9.41□□□□□ -0.9
RPD3YNL330C GSY1P23337 708 aa9.4□□□□□ -0.9
RPD3YNL330C SRO9P25567 434 aaKnown RBP9.4□□□□□ -0.9
RPD3YNL330C CDC60P26637 1090 aaKnown RBP9.4□□□□□ -0.9
RPD3YNL330C CHS3P29465 1165 aa9.4□□□□□ -0.9
RPD3YNL330C TDA3P38758 523 aa9.4□□□□□ -0.9
RPD3YNL330C VPS45P38932 577 aa9.4□□□□□ -0.9
RPD3YNL330C YMR124WP39523 943 aaKnown RBP9.4□□□□□ -0.9
RPD3YNL330C CCM1P48237 864 aaPredicted RBP9.4□□□□□ -0.9
RPD3YNL330C MSN5P52918 1224 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms