RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W TY3A-IQ99219 290 aa9.21□□□□□ -0.94
YPT11YNL304W ILV1P00927 576 aaKnown RBP9.2□□□□□ -0.94
YPT11YNL304W PKC1P24583 1151 aa9.2□□□□□ -0.94
YPT11YNL304W CDC15P27636 974 aa9.2□□□□□ -0.94
YPT11YNL304W TGL1P34163 548 aa9.2□□□□□ -0.94
YPT11YNL304W ISW1P38144 1129 aa9.2□□□□□ -0.94
YPT11YNL304W ERG7P38604 731 aa9.2□□□□□ -0.94
YPT11YNL304W NPR3P38742 1146 aa9.2□□□□□ -0.94
YPT11YNL304W NDT80P38830 627 aa9.2□□□□□ -0.94
YPT11YNL304W LCD1Q04377 747 aa9.2□□□□□ -0.94
YPT11YNL304W SVF1Q05515 481 aa9.2□□□□□ -0.94
YPT11YNL304W PSR2Q07949 397 aa9.2□□□□□ -0.94
YPT11YNL304W MCM4P30665 933 aaKnown RBP9.19□□□□□ -0.94
YPT11YNL304W EUG1P32474 517 aa9.19□□□□□ -0.94
YPT11YNL304W UTR4P32626 227 aa9.19□□□□□ -0.94
YPT11YNL304W UGA4P32837 571 aa9.19□□□□□ -0.94
YPT11YNL304W MCR1P36060 302 aaKnown RBP9.19□□□□□ -0.94
YPT11YNL304W GAA1P39012 614 aa9.19□□□□□ -0.94
YPT11YNL304W ATG32P40458 529 aa9.19□□□□□ -0.94
YPT11YNL304W DAK2P43550 591 aa9.19□□□□□ -0.94
YPT11YNL304W PRY3P47033 881 aa9.19□□□□□ -0.94
YPT11YNL304W YGR153WP48238 217 aa9.19□□□□□ -0.94
YPT11YNL304W UBA2P52488 636 aa9.19□□□□□ -0.94
YPT11YNL304W YGR125WP53273 1036 aa9.19□□□□□ -0.94
YPT11YNL304W CBK1P53894 756 aa9.19□□□□□ -0.94
YPT11YNL304W KRE33P53914 1056 aaKnown RBP9.19□□□□□ -0.94
YPT11YNL304W TMA64Q04600 565 aaKnown RBP9.19□□□□□ -0.94
YPT11YNL304W ARP6Q12509 438 aa9.19□□□□□ -0.94
YPT11YNL304W TIF6Q12522 245 aaKnown RBP9.19□□□□□ -0.94
YPT11YNL304W CKA2P19454 339 aa9.18□□□□□ -0.94
YPT11YNL304W PGM1P33401 570 aaKnown RBP9.18□□□□□ -0.94
YPT11YNL304W IXR1P33417 597 aa9.18□□□□□ -0.94
YPT11YNL304W ASH1P34233 588 aa9.18□□□□□ -0.94
YPT11YNL304W RKM3P38222 552 aa9.18□□□□□ -0.94
YPT11YNL304W NOC2P39744 710 aaKnown RBP9.18□□□□□ -0.94
YPT11YNL304W VTC2P43585 828 aa9.18□□□□□ -0.94
YPT11YNL304W ATG1P53104 897 aa9.18□□□□□ -0.94
YPT11YNL304W FOB1O13329 566 aa9.17□□□□□ -0.94
YPT11YNL304W CLB5P30283 435 aa9.17□□□□□ -0.94
YPT11YNL304W SRP40P32583 406 aaPredicted RBP9.17□□□□□ -0.94
YPT11YNL304W SEC8P32855 1065 aa9.17□□□□□ -0.94
YPT11YNL304W ROG3P43602 733 aa9.17□□□□□ -0.94
YPT11YNL304W HCR1Q05775 265 aaKnown RBP9.17□□□□□ -0.94
YPT11YNL304W DUS3Q06053 668 aaKnown RBP9.17□□□□□ -0.94
YPT11YNL304W FKS1P38631 1876 aaKnown RBP9.17□□□□□ -0.94
YPT11YNL304W HIR1P32479 840 aa9.16□□□□□ -0.94
YPT11YNL304W MIC60P36112 540 aa9.16□□□□□ -0.94
YPT11YNL304W ORC4P54791 529 aa9.16□□□□□ -0.94
YPT11YNL304W ADY4Q05955 493 aa9.16□□□□□ -0.94
YPT11YNL304W ISA1Q07821 250 aaPredicted RBP9.16□□□□□ -0.94
YPT11YNL304W TLG2Q08144 397 aa9.16□□□□□ -0.94
YPT11YNL304W PGK1P00560 416 aaKnown RBP9.15□□□□□ -0.94
YPT11YNL304W PHR1P05066 565 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
YPT11YNL304W GSY2P27472 705 aa9.15□□□□□ -0.94
YPT11YNL304W KNS1P32350 737 aaPredicted RBP9.15□□□□□ -0.94
YPT11YNL304W SHP1P34223 423 aa9.15□□□□□ -0.94
YPT11YNL304W PET10P36139 283 aa9.15□□□□□ -0.94
YPT11YNL304W MRPL10P36520 322 aa9.15□□□□□ -0.94
YPT11YNL304W ETP1P38748 585 aaKnown RBP9.15□□□□□ -0.94
YPT11YNL304W THI6P41835 540 aa9.15□□□□□ -0.94
YPT11YNL304W TFG2P41896 400 aaPredicted RBP9.15□□□□□ -0.94
YPT11YNL304W ZPR1P53303 486 aaKnown RBP9.15□□□□□ -0.94
YPT11YNL304W PGA2P53903 129 aa9.15□□□□□ -0.94
YPT11YNL304W PTA1Q01329 785 aaPredicted RBP9.15□□□□□ -0.94
YPT11YNL304W SLD5Q03406 294 aa9.15□□□□□ -0.94
YPT11YNL304W PHM6Q05637 104 aa9.15□□□□□ -0.94
YPT11YNL304W ATE1P16639 503 aa9.14□□□□□ -0.95
YPT11YNL304W HMF1P40037 129 aaKnown RBP9.14□□□□□ -0.95
YPT11YNL304W FYV10P40492 516 aa9.14□□□□□ -0.95
YPT11YNL304W VPS53P47061 822 aa9.14□□□□□ -0.95
YPT11YNL304W GFD1Q04839 188 aaKnown RBP9.14□□□□□ -0.95
YPT11YNL304W SRD1P09007 221 aa9.13□□□□□ -0.95
YPT11YNL304W CLN3P13365 580 aa9.13□□□□□ -0.95
YPT11YNL304W TKL1P23254 680 aaKnown RBP9.13□□□□□ -0.95
YPT11YNL304W RAM2P29703 316 aa9.13□□□□□ -0.95
YPT11YNL304W MOT2P34909 587 aaKnown RBP9.13□□□□□ -0.95
YPT11YNL304W REG2P38232 338 aa9.13□□□□□ -0.95
YPT11YNL304W SIP3P38717 1229 aa9.13□□□□□ -0.95
YPT11YNL304W UBP15P50101 1230 aa9.13□□□□□ -0.95
YPT11YNL304W SEC5P89102 971 aa9.13□□□□□ -0.95
YPT11YNL304W YLR225CQ05948 407 aaKnown RBP9.13□□□□□ -0.95
YPT11YNL304W CRD1Q07560 283 aa9.13□□□□□ -0.95
YPT11YNL304W ERP3Q12403 225 aa9.13□□□□□ -0.95
YPT11YNL304W SUV3P32580 737 aa9.12□□□□□ -0.95
YPT11YNL304W TFC4P33339 1025 aa9.12□□□□□ -0.95
YPT11YNL304W EBP2P36049 427 aaKnown RBP9.12□□□□□ -0.95
YPT11YNL304W ADE17P38009 592 aaKnown RBP9.12□□□□□ -0.95
YPT11YNL304W VPS29P38759 282 aa9.12□□□□□ -0.95
YPT11YNL304W RPN3P40016 523 aaKnown RBP9.12□□□□□ -0.95
YPT11YNL304W NUP82P40368 713 aa9.12□□□□□ -0.95
YPT11YNL304W FUS2Q05670 677 aa9.12□□□□□ -0.95
YPT11YNL304W DUS4Q06063 367 aa9.12□□□□□ -0.95
YPT11YNL304W MET7Q08645 548 aa9.12□□□□□ -0.95
YPT11YNL304W MSC6Q08818 692 aaKnown RBP9.12□□□□□ -0.95
YPT11YNL304W SRF1Q12516 437 aa9.12□□□□□ -0.95
YPT11YNL304W SUP45P12385 437 aaKnown RBP9.11□□□□□ -0.95
YPT11YNL304W MIP1P15801 1254 aa9.11□□□□□ -0.95
YPT11YNL304W OM45P16547 393 aa9.11□□□□□ -0.95
YPT11YNL304W PFK1P16861 987 aaKnown RBP9.11□□□□□ -0.95
YPT11YNL304W RGT1P32862 1170 aa9.11□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms