RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	YPL034W	Q03083	165 aa		4.81	□□□□□ -1.64
SRP1	YNL189W	NSE3	Q05541	303 aa		4.81	□□□□□ -1.64
SRP1	YNL189W	PUS7	Q08647	676 aa	Known RBP	4.81	□□□□□ -1.64
SRP1	YNL189W	SPO21	Q12411	609 aa		4.81	□□□□□ -1.64
SRP1	YNL189W	PGM1	P33401	570 aa	Known RBP	4.8	□□□□□ -1.64
SRP1	YNL189W	YKL107W	P34251	309 aa		4.8	□□□□□ -1.64
SRP1	YNL189W	BDF2	Q07442	638 aa		4.8	□□□□□ -1.64
SRP1	YNL189W	RKM4	Q12504	494 aa		4.8	□□□□□ -1.64
SRP1	YNL189W	SRP40	P32583	406 aa	Predicted RBP	4.79	□□□□□ -1.64
SRP1	YNL189W	MXR1	P40029	184 aa		4.79	□□□□□ -1.64
SRP1	YNL189W	TIM54	P47045	478 aa		4.79	□□□□□ -1.64
SRP1	YNL189W	CCT8	P47079	568 aa	Known RBP	4.79	□□□□□ -1.64
SRP1	YNL189W	HNT2	P49775	206 aa		4.79	□□□□□ -1.64
SRP1	YNL189W	NAN1	Q02931	896 aa	Known RBP	4.79	□□□□□ -1.64
SRP1	YNL189W	RCL1	Q08096	367 aa	Predicted RBP	4.79	□□□□□ -1.64
SRP1	YNL189W	SHE9	Q04172	456 aa		4.79	□□□□□ -1.64
SRP1	YNL189W	CDC53	Q12018	815 aa	Known RBP	4.79	□□□□□ -1.64
SRP1	YNL189W	YKL091C	P33324	310 aa	Known RBP	4.78	□□□□□ -1.64
SRP1	YNL189W	SAF1	P38352	637 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	PFD1	P46988	109 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	FMP25	Q08023	583 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	YPL260W	Q08977	551 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	GNT1	Q12096	491 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	YLR122C	Q12312	125 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	YVC1	Q12324	675 aa		4.78	□□□□□ -1.64
SRP1	YNL189W	RPL8B	P29453	256 aa	Known RBP	4.77	□□□□□ -1.65
SRP1	YNL189W	YHR020W	P38708	688 aa	Known RBP	4.77	□□□□□ -1.65
SRP1	YNL189W	MMM1	P41800	426 aa		4.77	□□□□□ -1.65
SRP1	YNL189W	YJL049W	P47048	450 aa		4.77	□□□□□ -1.65
SRP1	YNL189W	RPL11A	P0C0W9	174 aa	Known RBP	4.76	□□□□□ -1.65
SRP1	YNL189W	COQ2	P32378	372 aa		4.76	□□□□□ -1.65
SRP1	YNL189W	YSC84	P32793	468 aa		4.76	□□□□□ -1.65
SRP1	YNL189W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
SRP1	YNL189W	PNT1	P38969	423 aa		4.76	□□□□□ -1.65
SRP1	YNL189W	SPP382	Q06411	708 aa	Predicted RBP	4.76	□□□□□ -1.65
SRP1	YNL189W	HRK1	Q08732	759 aa	Known RBP	4.76	□□□□□ -1.65
SRP1	YNL189W	RPL11B	Q3E757	174 aa	Predicted RBP	4.76	□□□□□ -1.65
SRP1	YNL189W	CIT2	P08679	460 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
SRP1	YNL189W	MRP8	P35719	219 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
SRP1	YNL189W	IRR1	P40541	1150 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	UBX5	Q06682	500 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	GCD1	P09032	578 aa	Predicted RBP	4.75	□□□□□ -1.65
SRP1	YNL189W	SBP1	P10080	294 aa	Known RBP	4.75	□□□□□ -1.65
SRP1	YNL189W	SAM35	P14693	329 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	SNF5	P18480	905 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	PBY1	P38254	753 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	YGR125W	P53273	1036 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	YGR130C	P53278	816 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	RCM1	P53972	490 aa		4.75	□□□□□ -1.65
SRP1	YNL189W	HOS3	Q02959	697 aa	Known RBP	4.75	□□□□□ -1.65
SRP1	YNL189W	TRP3	P00937	484 aa		4.74	□□□□□ -1.65
SRP1	YNL189W	CHS2	P14180	963 aa		4.74	□□□□□ -1.65
SRP1	YNL189W	RSP5	P39940	809 aa	Known RBP	4.74	□□□□□ -1.65
SRP1	YNL189W	BUD6	P41697	788 aa		4.74	□□□□□ -1.65
SRP1	YNL189W	OYE3	P41816	400 aa	Predicted RBP	4.74	□□□□□ -1.65
SRP1	YNL189W	CIT3	P43635	486 aa		4.74	□□□□□ -1.65
SRP1	YNL189W	PPM2	Q08282	695 aa		4.74	□□□□□ -1.65
SRP1	YNL189W	FLC1	Q08967	793 aa		4.74	□□□□□ -1.65
SRP1	YNL189W	YHL012W	P38709	493 aa		4.73	□□□□□ -1.65
SRP1	YNL189W	PEX7	P39108	375 aa		4.73	□□□□□ -1.65
SRP1	YNL189W	ALR2	P43553	858 aa		4.73	□□□□□ -1.65
SRP1	YNL189W	TNA1	P53322	534 aa		4.73	□□□□□ -1.65
SRP1	YNL189W	RPN4	Q03465	531 aa		4.73	□□□□□ -1.65
SRP1	YNL189W	EAF1	Q06337	982 aa		4.73	□□□□□ -1.65
SRP1	YNL189W	CIT1	P00890	479 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	HBS1	P32769	611 aa	Known RBP	4.72	□□□□□ -1.65
SRP1	YNL189W	YKL151C	P36059	337 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	KAE1	P36132	386 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	RPN3	P40016	523 aa	Known RBP	4.72	□□□□□ -1.65
SRP1	YNL189W	KRI1	P42846	591 aa	Known RBP	4.72	□□□□□ -1.65
SRP1	YNL189W	SPO75	Q07798	868 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	MSB1	P21339	1137 aa	Known RBP	4.72	□□□□□ -1.65
SRP1	YNL189W	ARE1	P25628	610 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	SLA2	P33338	968 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	BAP2	P38084	609 aa		4.72	□□□□□ -1.65
SRP1	YNL189W	ERR1	P0CX10	437 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	ERR2	P0CX11	437 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	HSP60	P19882	572 aa	Known RBP	4.71	□□□□□ -1.66
SRP1	YNL189W	TIM23	P32897	222 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	YKR073C	P36153	106 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	UGA2	P38067	497 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	YBR284W	P38150	797 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	GTS1	P40956	396 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	RTA1	P53047	317 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	UTP8	P53276	713 aa	Known RBP	4.71	□□□□□ -1.66
SRP1	YNL189W	RNH70	P53331	553 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	HRQ1	Q05549	1077 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	YDR306C	Q06640	478 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	TRE1	Q08919	783 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	OSH2	Q12451	1283 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	YOR131C	Q12486	218 aa		4.71	□□□□□ -1.66
SRP1	YNL189W	ERT1	P38140	529 aa		4.7	□□□□□ -1.66
SRP1	YNL189W	PTC7	P38797	343 aa		4.7	□□□□□ -1.66
SRP1	YNL189W	ERP6	P53198	216 aa		4.7	□□□□□ -1.66
SRP1	YNL189W	SDH1	Q00711	640 aa		4.7	□□□□□ -1.66
SRP1	YNL189W	SSY1	Q03770	852 aa		4.7	□□□□□ -1.66
SRP1	YNL189W	DUS3	Q06053	668 aa	Known RBP	4.7	□□□□□ -1.66
SRP1	YNL189W	ACM1	Q08981	209 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms