RNA–Protein interactions for RNA: YNL032W

SIW14, Transcript of Tyrosine phosphatase involved in actin organization and endocytosis, yeast

Gene SIW14, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIW14	YNL032W	YNR065C	P53751	1116 aa		4.9	□□□□□ -1.63
SIW14	YNL032W	LSO1	Q3E827	93 aa		4.9	□□□□□ -1.63
SIW14	YNL032W	USO1	P25386	1790 aa		4.89	□□□□□ -1.63
SIW14	YNL032W	YJR124C	P47159	448 aa		4.89	□□□□□ -1.63
SIW14	YNL032W	ZDS1	P50111	915 aa	Known RBP	4.89	□□□□□ -1.63
SIW14	YNL032W	HAT1	Q12341	374 aa		4.89	□□□□□ -1.63
SIW14	YNL032W	RAD50	P12753	1312 aa		4.89	□□□□□ -1.63
SIW14	YNL032W	RPS19A	P07280	144 aa	Known RBP	4.88	□□□□□ -1.63
SIW14	YNL032W	RPS19B	P07281	144 aa	Predicted RBP	4.88	□□□□□ -1.63
SIW14	YNL032W	WHI3	P34761	661 aa	Known RBP	4.88	□□□□□ -1.63
SIW14	YNL032W	YBR287W	P38355	427 aa		4.88	□□□□□ -1.63
SIW14	YNL032W	FIR1	P40020	876 aa		4.88	□□□□□ -1.63
SIW14	YNL032W	MMM1	P41800	426 aa		4.88	□□□□□ -1.63
SIW14	YNL032W	HAS1	Q03532	505 aa	Known RBP	4.88	□□□□□ -1.63
SIW14	YNL032W	CDA2	Q06703	312 aa		4.88	□□□□□ -1.63
SIW14	YNL032W	YRF1-2	P40105	1681 aa		4.87	□□□□□ -1.63
SIW14	YNL032W	MNN4	P36044	1178 aa		4.87	□□□□□ -1.63
SIW14	YNL032W	GIP4	P39732	760 aa		4.87	□□□□□ -1.63
SIW14	YNL032W	RGD2	P43556	714 aa		4.87	□□□□□ -1.63
SIW14	YNL032W	DSD1	P53095	428 aa		4.87	□□□□□ -1.63
SIW14	YNL032W	APC11	Q12157	165 aa		4.87	□□□□□ -1.63
SIW14	YNL032W	RPS24A	P0CX31	135 aa	Known RBP	4.86	□□□□□ -1.63
SIW14	YNL032W	RPS24B	P0CX32	135 aa	Known RBP	4.86	□□□□□ -1.63
SIW14	YNL032W	MSP1	P28737	362 aa		4.86	□□□□□ -1.63
SIW14	YNL032W	HSP78	P33416	811 aa		4.86	□□□□□ -1.63
SIW14	YNL032W	TSA1	P34760	196 aa	Known RBP	4.86	□□□□□ -1.63
SIW14	YNL032W	GLO3	P38682	493 aa	Known RBP	4.86	□□□□□ -1.63
SIW14	YNL032W	QDR1	P40475	563 aa		4.86	□□□□□ -1.63
SIW14	YNL032W	HXT8	P40886	569 aa		4.86	□□□□□ -1.63
SIW14	YNL032W	ATG1	P53104	897 aa		4.86	□□□□□ -1.63
SIW14	YNL032W	NSE3	Q05541	303 aa		4.86	□□□□□ -1.63
SIW14	YNL032W	TRL1	P09880	827 aa	Known RBP	4.85	□□□□□ -1.63
SIW14	YNL032W	HVG1	P0CE11	249 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	THI80	P35202	319 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	ERP5	P38819	212 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	CIT3	P43635	486 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	SUT1	P53032	299 aa	Known RBP	4.85	□□□□□ -1.63
SIW14	YNL032W	SRT1	Q03175	343 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	COG8	Q04632	607 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	NSI1	Q12457	570 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	YBL113C	Q7M4S9	792 aa		4.85	□□□□□ -1.63
SIW14	YNL032W	ROM2	P51862	1356 aa	Known RBP	4.85	□□□□□ -1.63
SIW14	YNL032W	NOT3	P06102	836 aa	Known RBP	4.84	□□□□□ -1.63
SIW14	YNL032W	CDC16	P09798	840 aa		4.84	□□□□□ -1.63
SIW14	YNL032W	GPT2	P36148	743 aa		4.84	□□□□□ -1.63
SIW14	YNL032W	YNG2	P38806	282 aa	Known RBP	4.84	□□□□□ -1.63
SIW14	YNL032W	RRT14	P40470	206 aa		4.84	□□□□□ -1.63
SIW14	YNL032W	ACF4	P47129	309 aa		4.84	□□□□□ -1.63
SIW14	YNL032W	FAR11	P53917	953 aa		4.84	□□□□□ -1.63
SIW14	YNL032W	RPB10	P22139	70 aa		4.83	□□□□□ -1.64
SIW14	YNL032W	GCD7	P32502	381 aa	Predicted RBP	4.83	□□□□□ -1.64
SIW14	YNL032W	GRS1	P38088	690 aa	Known RBP	4.83	□□□□□ -1.64
SIW14	YNL032W	SSF1	P38789	453 aa	Predicted RBP	4.83	□□□□□ -1.64
SIW14	YNL032W	PIL1	P53252	339 aa	Known RBP	4.83	□□□□□ -1.64
SIW14	YNL032W	YOR223W	Q12015	292 aa		4.83	□□□□□ -1.64
SIW14	YNL032W	GLO4	Q12320	285 aa		4.83	□□□□□ -1.64
SIW14	YNL032W	KCC4	P25389	1037 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	SMC1	P32908	1225 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	KTR2	P33550	425 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	ARL1	P38116	183 aa	Known RBP	4.82	□□□□□ -1.64
SIW14	YNL032W	HYR1	P40581	163 aa	Known RBP	4.82	□□□□□ -1.64
SIW14	YNL032W	MDJ2	P42834	146 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	TCB2	P48231	1178 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	GIS1	Q03833	894 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	YMR074C	Q04773	145 aa		4.82	□□□□□ -1.64
SIW14	YNL032W	BMS1	Q08965	1183 aa	Known RBP	4.82	□□□□□ -1.64
SIW14	YNL032W	NUP145	P49687	1317 aa		4.81	□□□□□ -1.64
SIW14	YNL032W	RNR2	P09938	399 aa	Known RBP	4.81	□□□□□ -1.64
SIW14	YNL032W	HSP104	P31539	908 aa	Known RBP	4.81	□□□□□ -1.64
SIW14	YNL032W	NMD2	P38798	1089 aa	Known RBP	4.81	□□□□□ -1.64
SIW14	YNL032W	CSI1	Q04368	295 aa		4.81	□□□□□ -1.64
SIW14	YNL032W	NKP2	Q06162	153 aa		4.81	□□□□□ -1.64
SIW14	YNL032W	YOL057W	Q08225	711 aa		4.81	□□□□□ -1.64
SIW14	YNL032W	NOP8	Q08287	484 aa	Predicted RBP	4.81	□□□□□ -1.64
SIW14	YNL032W	AIM44	Q99299	758 aa		4.81	□□□□□ -1.64
SIW14	YNL032W	EBP2	P36049	427 aa	Known RBP	4.8	□□□□□ -1.64
SIW14	YNL032W	RFC1	P38630	861 aa	Known RBP	4.8	□□□□□ -1.64
SIW14	YNL032W	RAD55	P38953	406 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	BDH2	P39713	417 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	NTA1	P40354	457 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	FET4	P40988	552 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	OYE3	P41816	400 aa	Predicted RBP	4.8	□□□□□ -1.64
SIW14	YNL032W	SPO1	P53541	631 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	HST1	P53685	503 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	UFD2	P54860	961 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	YOR059C	Q08448	450 aa	Known RBP	4.8	□□□□□ -1.64
SIW14	YNL032W	SLM3	Q12093	417 aa		4.8	□□□□□ -1.64
SIW14	YNL032W	COQ4	O13525	335 aa		4.79	□□□□□ -1.64
SIW14	YNL032W	TPM1	P17536	199 aa	Known RBP	4.79	□□□□□ -1.64
SIW14	YNL032W	YJR008W	P47085	338 aa		4.79	□□□□□ -1.64
SIW14	YNL032W	DNM1	P54861	757 aa		4.79	□□□□□ -1.64
SIW14	YNL032W	TRS120	Q04183	1289 aa		4.79	□□□□□ -1.64
SIW14	YNL032W	YDR306C	Q06640	478 aa		4.79	□□□□□ -1.64
SIW14	YNL032W	TIF6	Q12522	245 aa	Known RBP	4.79	□□□□□ -1.64
SIW14	YNL032W	RRP5	Q05022	1729 aa	Known RBP	4.79	□□□□□ -1.64
SIW14	YNL032W	PRP5	P21372	849 aa	Predicted RBP	4.78	□□□□□ -1.64
SIW14	YNL032W	FLR1	P38124	548 aa		4.78	□□□□□ -1.64
SIW14	YNL032W	STM1	P39015	273 aa	Known RBP	4.78	□□□□□ -1.64
SIW14	YNL032W	YML020W	Q03722	664 aa		4.78	□□□□□ -1.64
SIW14	YNL032W	DOT1	Q04089	582 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 272.7 ms