RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP5	YMR229C	WAR1	Q03631	944 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	SPP382	Q06411	708 aa	Predicted RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	RIP-Chip
RRP5	YMR229C	YKL068W-A	Q3E826	78 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	PWP1	P21304	576 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	MRPL25	P23369	157 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	RPL8B	P29453	256 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	SWI3	P32591	825 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	RTG2	P32608	588 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	RAD5	P32849	1169 aa	Predicted RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	CCL1	P37366	393 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	ISW1	P38144	1129 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	MAL31	P38156	614 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	FZO1	P38297	855 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	SSP1	P38871	571 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	BEM4	P39011	633 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	URB2	P47108	1174 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	YGR237C	P50089	785 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	ERO1	Q03103	563 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	RCF1	Q03713	159 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	COG4	Q06096	861 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	YPR078C	Q06813	372 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	YOR296W	Q08748	1289 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	THS1	P04801	734 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	RPB2	P08518	1224 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	GSY2	P27472	705 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	MAL33	P38157	468 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	HMF1	P40037	129 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	RRD1	P40454	393 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	EAR1	Q03212	550 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	GIS4	Q04233	774 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	LYS2	P07702	1392 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	GCD2	P12754	651 aa	Predicted RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	SIT4	P20604	311 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	PSO2	P30620	661 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	AFG2	P32794	780 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	EFM2	P38347	419 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	PRP42	Q03776	544 aa	Known RBP	3.57	□□□□□ -1.84
RRP5	YMR229C	YLR271W	Q06152	274 aa		3.57	□□□□□ -1.84
RRP5	YMR229C	YMR085W	P0CF18	432 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
RRP5	YMR229C	TIF5	P38431	405 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	RPN8	Q08723	338 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	CBP1	P07252	654 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	BUD14	P27637	709 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	CAF130	P53280	1122 aa	Predicted RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	COG6	P53959	839 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	KEL3	Q08979	651 aa	Predicted RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	VPS3	P23643	1011 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	SRO9	P25567	434 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	CDC3	P32457	520 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	RIM101	P33400	625 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	KAP123	P40069	1113 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	SPR3	P41901	512 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	VMA10	P48836	114 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	TAN1	P53072	289 aa	Predicted RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	YNL193W	P53870	558 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	BET4	Q00618	327 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	DDP1	Q99321	188 aa	Known RBP	3.56	□□□□□ -1.84
RRP5	YMR229C	VMR1	P38735	1592 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	SNT1	P25357	1226 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	RAD54	P32863	898 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	NNF1	P47149	201 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	YPT11	P48559	417 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	TAH18	Q12181	623 aa		3.56	□□□□□ -1.84
RRP5	YMR229C	SMY1	P32364	656 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	TIM23	P32897	222 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	CCT2	P39076	527 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	NIT1	P40447	199 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	YNR021W	P53723	404 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	SKY1	Q03656	742 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	STE23	Q06010	1027 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	THR4	P16120	514 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	VMA2	P16140	517 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	UBP13	P38187	747 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	AKR1	P39010	764 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	TAF1	P46677	1066 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	PEX15	Q08215	383 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	BCK1	Q01389	1478 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	PRP4	P20053	465 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	RAD53	P22216	821 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	RAM2	P29703	316 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	GCD7	P32502	381 aa	Predicted RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	SRP40	P32583	406 aa	Predicted RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	HEL1	P36113	551 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	PCH2	P38126	564 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	RTS1	P38903	757 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	YFL034W	P43564	1073 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	YFH7	P43591	353 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	ERP6	P53198	216 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	DSL1	P53847	754 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	SSL2	Q00578	843 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	ATG17	Q06410	417 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	YPL216W	Q08964	1102 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	RIP-Chip
RRP5	YMR229C	PAH1	P32567	862 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	FBP26	P32604	452 aa		3.55	□□□□□ -1.84
RRP5	YMR229C	BMH2	P34730	273 aa	Known RBP	3.55	□□□□□ -1.84
RRP5	YMR229C	VID27	P40157	782 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms