RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W PRE9P23638 258 aaKnown RBP6.74□□□□□ -1.33
CSI1YMR025W ABZ1P37254 787 aaPredicted RBP6.74□□□□□ -1.33
CSI1YMR025W MRPS18P42847 217 aa6.74□□□□□ -1.33
CSI1YMR025W YPL260WQ08977 551 aa6.74□□□□□ -1.33
CSI1YMR025W MEF2P39677 819 aa6.73□□□□□ -1.33
CSI1YMR025W RPN3P40016 523 aaKnown RBP6.73□□□□□ -1.33
CSI1YMR025W SPT20P50875 604 aa6.73□□□□□ -1.33
CSI1YMR025W GCN5Q03330 439 aa6.73□□□□□ -1.33
CSI1YMR025W MKK2P32491 506 aa6.72□□□□□ -1.33
CSI1YMR025W PUF4P25339 888 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
CSI1YMR025W CTS1P29029 562 aa6.71□□□□□ -1.34
CSI1YMR025W SHM2P37291 469 aaKnown RBP6.71□□□□□ -1.34
CSI1YMR025W YFL054CP43549 646 aa6.71□□□□□ -1.34
CSI1YMR025W HNT2P49775 206 aa6.71□□□□□ -1.34
CSI1YMR025W SIW14P53965 281 aa6.71□□□□□ -1.34
CSI1YMR025W SEN54Q02825 467 aaPredicted RBP6.71□□□□□ -1.34
CSI1YMR025W ROT1Q03691 256 aa6.71□□□□□ -1.34
CSI1YMR025W RAD2P07276 1031 aa6.7□□□□□ -1.34
CSI1YMR025W PLB2Q03674 706 aa6.69□□□□□ -1.34
CSI1YMR025W CYC8P14922 966 aa6.68□□□□□ -1.34
CSI1YMR025W SEC8P32855 1065 aa6.68□□□□□ -1.34
CSI1YMR025W TAT2P38967 592 aa6.68□□□□□ -1.34
CSI1YMR025W HXT13P39924 564 aa6.68□□□□□ -1.34
CSI1YMR025W RPS26AP39938 119 aaKnown RBP6.68□□□□□ -1.34
CSI1YMR025W RPS26BP39939 119 aaKnown RBP6.68□□□□□ -1.34
CSI1YMR025W ENT3P47160 408 aa6.68□□□□□ -1.34
CSI1YMR025W HXT17P53631 564 aa6.68□□□□□ -1.34
CSI1YMR025W HXT15P54854 567 aa6.68□□□□□ -1.34
CSI1YMR025W GNP1P48813 663 aa6.67□□□□□ -1.34
CSI1YMR025W RSM24Q03976 319 aa6.67□□□□□ -1.34
CSI1YMR025W GSF2Q04697 403 aaKnown RBP6.67□□□□□ -1.34
CSI1YMR025W MRL1Q06815 381 aa6.67□□□□□ -1.34
CSI1YMR025W YER152CP10356 443 aa6.66□□□□□ -1.34
CSI1YMR025W RGD1P38339 666 aa6.66□□□□□ -1.34
CSI1YMR025W MPT5P39016 859 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
CSI1YMR025W DUS4Q06063 367 aa6.66□□□□□ -1.34
CSI1YMR025W GAL10P04397 699 aa6.65□□□□□ -1.34
CSI1YMR025W CMP2P14747 604 aa6.65□□□□□ -1.34
CSI1YMR025W SRM1P21827 482 aa6.65□□□□□ -1.34
CSI1YMR025W SYP1P25623 870 aaKnown RBP6.65□□□□□ -1.34
CSI1YMR025W RFC5P38251 354 aa6.65□□□□□ -1.34
CSI1YMR025W MCM2P29469 868 aa6.64□□□□□ -1.35
CSI1YMR025W MLS1P30952 554 aa6.64□□□□□ -1.35
CSI1YMR025W TUB2P02557 457 aaKnown RBP6.63□□□□□ -1.35
CSI1YMR025W GCR1P07261 785 aa6.63□□□□□ -1.35
CSI1YMR025W SLD2P34252 453 aa6.63□□□□□ -1.35
CSI1YMR025W CNN1P43618 361 aa6.63□□□□□ -1.35
CSI1YMR025W RIB2Q12362 591 aaKnown RBP6.63□□□□□ -1.35
CSI1YMR025W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
CSI1YMR025W SVS1Q12254 260 aa6.62□□□□□ -1.35
CSI1YMR025W DBP5P20449 482 aaKnown RBP6.61□□□□□ -1.35
CSI1YMR025W DOM34P33309 386 aa6.61□□□□□ -1.35
CSI1YMR025W MGE1P38523 228 aa6.61□□□□□ -1.35
CSI1YMR025W POL32P47110 350 aa6.6□□□□□ -1.35
CSI1YMR025W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
CSI1YMR025W KIN2P13186 1147 aaKnown RBP6.59□□□□□ -1.35
CSI1YMR025W ATE1P16639 503 aa6.59□□□□□ -1.35
CSI1YMR025W CDC20P26309 610 aa6.59□□□□□ -1.35
CSI1YMR025W APL1P27351 700 aa6.59□□□□□ -1.35
CSI1YMR025W MPH1P40562 993 aa6.59□□□□□ -1.35
CSI1YMR025W SPR28Q04921 423 aa6.59□□□□□ -1.35
CSI1YMR025W RXT3Q07458 294 aa6.59□□□□□ -1.35
CSI1YMR025W ACK1Q07622 623 aaPredicted RBP6.59□□□□□ -1.35
CSI1YMR025W CDC6P09119 513 aa6.58□□□□□ -1.36
CSI1YMR025W GPB1Q08886 897 aa6.58□□□□□ -1.36
CSI1YMR025W BAS1P22035 811 aa6.57□□□□□ -1.36
CSI1YMR025W FYV10P40492 516 aa6.57□□□□□ -1.36
CSI1YMR025W RER2P35196 286 aa6.56□□□□□ -1.36
CSI1YMR025W YJR107WP47145 328 aa6.56□□□□□ -1.36
CSI1YMR025W PBP1P53297 722 aaKnown RBP6.56□□□□□ -1.36
CSI1YMR025W TMA10Q06177 86 aa6.56□□□□□ -1.36
CSI1YMR025W ATG13Q06628 738 aa6.56□□□□□ -1.36
CSI1YMR025W LST4P34239 828 aa6.55□□□□□ -1.36
CSI1YMR025W MXR1P40029 184 aa6.55□□□□□ -1.36
CSI1YMR025W GTF1P53260 183 aaPredicted RBP6.55□□□□□ -1.36
CSI1YMR025W SIZ1Q04195 904 aa6.55□□□□□ -1.36
CSI1YMR025W PNS1Q12412 539 aa6.55□□□□□ -1.36
CSI1YMR025W TRM2P33753 639 aa6.54□□□□□ -1.36
CSI1YMR025W MCM7P38132 845 aa6.54□□□□□ -1.36
CSI1YMR025W TIF35Q04067 274 aaKnown RBP6.54□□□□□ -1.36
CSI1YMR025W RAD27P26793 382 aa6.53□□□□□ -1.36
CSI1YMR025W MCM6P53091 1017 aaKnown RBP6.53□□□□□ -1.36
CSI1YMR025W VPS62P53285 467 aa6.53□□□□□ -1.36
CSI1YMR025W ACE2P21192 770 aa6.52□□□□□ -1.37
CSI1YMR025W STE11P23561 717 aa6.52□□□□□ -1.37
CSI1YMR025W HCM1P25364 564 aa6.52□□□□□ -1.37
CSI1YMR025W UGA2P38067 497 aa6.52□□□□□ -1.37
CSI1YMR025W GCV2P49095 1034 aa6.52□□□□□ -1.37
CSI1YMR025W MNN10P50108 393 aaKnown RBP6.52□□□□□ -1.37
CSI1YMR025W YAP6Q03935 383 aa6.52□□□□□ -1.37
CSI1YMR025W ESF1Q06344 628 aaKnown RBP6.52□□□□□ -1.37
CSI1YMR025W RRP15Q06511 250 aaPredicted RBP6.52□□□□□ -1.37
CSI1YMR025W RTT10Q08924 1013 aa6.52□□□□□ -1.37
CSI1YMR025W GNT1Q12096 491 aa6.52□□□□□ -1.37
CSI1YMR025W RPL11AP0C0W9 174 aaKnown RBP6.51□□□□□ -1.37
CSI1YMR025W DBP2P24783 546 aaKnown RBP6.51□□□□□ -1.37
CSI1YMR025W PEP7P32609 515 aa6.51□□□□□ -1.37
CSI1YMR025W MSC2Q03455 724 aa6.51□□□□□ -1.37
CSI1YMR025W ACM1Q08981 209 aa6.51□□□□□ -1.37
CSI1YMR025W PUS9Q12069 462 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms