RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W ADD66P36040 267 aa3.03□□□□□ -1.92
PRP39YML046W RSM26P47141 266 aa3.03□□□□□ -1.92
PRP39YML046W YCS4Q06156 1176 aa3.03□□□□□ -1.92
PRP39YML046W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
PRP39YML046W HMI1Q12039 706 aa3.03□□□□□ -1.92
PRP39YML046W KIN2P13186 1147 aaKnown RBP3.03□□□□□ -1.93
PRP39YML046W RIB2Q12362 591 aaKnown RBP3.03□□□□□ -1.93
PRP39YML046W NOP12Q08208 459 aaKnown RBP3.02□□□□□ -1.93
PRP39YML046W SQT1P35184 431 aa3.01□□□□□ -1.93
PRP39YML046W HRR25P29295 494 aaKnown RBP3.01□□□□□ -1.93
PRP39YML046W CUE2P36075 443 aaKnown RBP3.01□□□□□ -1.93
PRP39YML046W RPN3P40016 523 aaKnown RBP3.01□□□□□ -1.93
PRP39YML046W IOC3P43596 787 aa3.01□□□□□ -1.93
PRP39YML046W GCV2P49095 1034 aa3.01□□□□□ -1.93
PRP39YML046W SAM37P50110 327 aa3.01□□□□□ -1.93
PRP39YML046W AIM39Q08223 395 aa3.01□□□□□ -1.93
PRP39YML046W PTC5Q12511 572 aa3.01□□□□□ -1.93
PRP39YML046W CIC1P38779 376 aaKnown RBP3□□□□□ -1.93
PRP39YML046W STU2P46675 888 aa3□□□□□ -1.93
PRP39YML046W APL1P27351 700 aa2.99□□□□□ -1.93
PRP39YML046W PLB1P39105 664 aa2.99□□□□□ -1.93
PRP39YML046W SIZ1Q04195 904 aa2.99□□□□□ -1.93
PRP39YML046W AFG2P32794 780 aa2.99□□□□□ -1.93
PRP39YML046W RDH54P38086 958 aa2.99□□□□□ -1.93
PRP39YML046W PEX28P38848 579 aa2.99□□□□□ -1.93
PRP39YML046W SVS1Q12254 260 aa2.99□□□□□ -1.93
PRP39YML046W SIP5P40210 489 aaKnown RBP2.98□□□□□ -1.93
PRP39YML046W QRI1P43123 477 aaKnown RBP2.98□□□□□ -1.93
PRP39YML046W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
PRP39YML046W PFK1P16861 987 aaKnown RBP2.97□□□□□ -1.93
PRP39YML046W EST2Q06163 884 aa2.97□□□□□ -1.93
PRP39YML046W YPL260WQ08977 551 aa2.97□□□□□ -1.93
PRP39YML046W KAR2P16474 682 aaKnown RBP2.96□□□□□ -1.93
PRP39YML046W UGA4P32837 571 aa2.96□□□□□ -1.93
PRP39YML046W PRP40P33203 583 aaKnown RBP2.96□□□□□ -1.93
PRP39YML046W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.96□□□□□ -1.93not detected
PRP39YML046W ALG3P38179 458 aa2.96□□□□□ -1.94
PRP39YML046W YGL140CP53120 1219 aa2.95□□□□□ -1.94
PRP39YML046W ULP1Q02724 621 aa2.95□□□□□ -1.94
PRP39YML046W GPI13Q07830 1017 aa2.95□□□□□ -1.94
PRP39YML046W YFL054CP43549 646 aa2.94□□□□□ -1.94
PRP39YML046W EXG2P52911 562 aa2.94□□□□□ -1.94
PRP39YML046W DMA2P53924 522 aa2.94□□□□□ -1.94
PRP39YML046W MSC2Q03455 724 aa2.94□□□□□ -1.94
PRP39YML046W TMN2Q04562 672 aa2.94□□□□□ -1.94
PRP39YML046W MCH5Q08777 521 aa2.94□□□□□ -1.94
PRP39YML046W DED1P06634 604 aaKnown RBP2.93□□□□□ -1.94
PRP39YML046W HEM13P11353 328 aaKnown RBP2.93□□□□□ -1.94
PRP39YML046W DAK2P43550 591 aa2.93□□□□□ -1.94
PRP39YML046W PEP7P32609 515 aa2.92□□□□□ -1.94
PRP39YML046W MND2P40577 368 aa2.92□□□□□ -1.94
PRP39YML046W TPO1Q07824 586 aa2.92□□□□□ -1.94
PRP39YML046W SEC23P15303 768 aaKnown RBP2.92□□□□□ -1.94
PRP39YML046W GRS1P38088 690 aaKnown RBP2.92□□□□□ -1.94
PRP39YML046W POA1P38218 177 aa2.92□□□□□ -1.94
PRP39YML046W MET12P46151 657 aa2.92□□□□□ -1.94
PRP39YML046W DAL4Q04895 635 aa2.92□□□□□ -1.94
PRP39YML046W IRC10Q08118 586 aa2.92□□□□□ -1.94
PRP39YML046W HIS5P07172 385 aa2.91□□□□□ -1.94
PRP39YML046W YER158CP40095 573 aa2.91□□□□□ -1.94
PRP39YML046W ATG13Q06628 738 aa2.91□□□□□ -1.94
PRP39YML046W FRT1Q99332 602 aa2.91□□□□□ -1.94
PRP39YML046W RPP2AP05319 106 aaKnown RBP2.9□□□□□ -1.94
PRP39YML046W TRL1P09880 827 aaKnown RBP2.9□□□□□ -1.94
PRP39YML046W ADY3Q07732 790 aa2.9□□□□□ -1.94
PRP39YML046W YOL073CQ08232 322 aa2.9□□□□□ -1.94
PRP39YML046W NDJ1Q12366 352 aa2.9□□□□□ -1.94
PRP39YML046W EFT1P32324 842 aaKnown RBP2.9□□□□□ -1.95
PRP39YML046W SUL1P38359 859 aa2.9□□□□□ -1.95
PRP39YML046W RPL34AP87262 121 aaPredicted RBP2.9□□□□□ -1.95
PRP39YML046W NUT2Q06213 157 aa2.9□□□□□ -1.95
PRP39YML046W OMS1Q06668 471 aa2.9□□□□□ -1.95
PRP39YML046W YLR040CQ07988 224 aa2.9□□□□□ -1.95
PRP39YML046W TIM44Q01852 431 aa2.89□□□□□ -1.95
PRP39YML046W ADI1Q03677 179 aa2.89□□□□□ -1.95
PRP39YML046W AFT2Q08957 416 aa2.89□□□□□ -1.95
PRP39YML046W KCS1Q12494 1050 aa2.89□□□□□ -1.95
PRP39YML046W STB4P50104 949 aa2.88□□□□□ -1.95
PRP39YML046W SUB2Q07478 446 aaKnown RBP2.88□□□□□ -1.95
PRP39YML046W CHA4P43634 648 aa2.88□□□□□ -1.95
PRP39YML046W ENB1Q08299 606 aa2.88□□□□□ -1.95
PRP39YML046W GCD6P32501 712 aaKnown RBP2.87□□□□□ -1.95
PRP39YML046W ZRG8P40021 1076 aa2.87□□□□□ -1.95
PRP39YML046W RAT1Q02792 1006 aaKnown RBP2.87□□□□□ -1.95
PRP39YML046W ACF2Q12168 779 aa2.87□□□□□ -1.95
PRP39YML046W YER152CP10356 443 aa2.86□□□□□ -1.95
PRP39YML046W ENA1P13587 1091 aa2.86□□□□□ -1.95
PRP39YML046W ACE2P21192 770 aa2.86□□□□□ -1.95
PRP39YML046W VPS35P34110 944 aa2.86□□□□□ -1.95
PRP39YML046W MDJ2P42834 146 aa2.86□□□□□ -1.95
PRP39YML046W ENA2Q01896 1091 aa2.86□□□□□ -1.95
PRP39YML046W YPL109CQ02981 657 aa2.86□□□□□ -1.95
PRP39YML046W YAP7Q08182 245 aa2.86□□□□□ -1.95
PRP39YML046W ENA5Q12691 1091 aa2.86□□□□□ -1.95
PRP39YML046W TAF13P11747 167 aa2.86□□□□□ -1.95
PRP39YML046W BAS1P22035 811 aa2.86□□□□□ -1.95
PRP39YML046W PEX2P32800 271 aa2.86□□□□□ -1.95
PRP39YML046W MTH1P35198 433 aa2.86□□□□□ -1.95
PRP39YML046W RGD1P38339 666 aa2.86□□□□□ -1.95
PRP39YML046W YMR206WQ03695 313 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 96.8 ms