RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeastyeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA6YLR447C ENT3P47160 408 aa6.03□□□□□ -1.44
VMA6YLR447C RAD2P07276 1031 aa6.02□□□□□ -1.45
VMA6YLR447C SPT20P50875 604 aa6.02□□□□□ -1.45
VMA6YLR447C SIW14P53965 281 aa6.02□□□□□ -1.45
VMA6YLR447C ROD1Q02805 837 aa6.02□□□□□ -1.45
VMA6YLR447C RSM24Q03976 319 aa6.02□□□□□ -1.45
VMA6YLR447C CYC1P00044 109 aaPredicted RBP6.01□□□□□ -1.45
VMA6YLR447C SEC8P32855 1065 aa6.01□□□□□ -1.45
VMA6YLR447C LAM1P38851 1228 aa6.01□□□□□ -1.45
VMA6YLR447C MEF2P39677 819 aa6.01□□□□□ -1.45
VMA6YLR447C MRL1Q06815 381 aa6.01□□□□□ -1.45
VMA6YLR447C PRE10P21242 288 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
VMA6YLR447C MKK2P32491 506 aa6□□□□□ -1.45
VMA6YLR447C RFC5P38251 354 aa6□□□□□ -1.45
VMA6YLR447C RPS26AP39938 119 aaKnown RBP6□□□□□ -1.45
VMA6YLR447C RPS26BP39939 119 aaKnown RBP6□□□□□ -1.45
VMA6YLR447C RAT1Q02792 1006 aaKnown RBP6□□□□□ -1.45
VMA6YLR447C SEN54Q02825 467 aaPredicted RBP6□□□□□ -1.45
VMA6YLR447C CYC8P14922 966 aa5.99□□□□□ -1.45
VMA6YLR447C SNF5P18480 905 aa5.99□□□□□ -1.45
VMA6YLR447C RGD1P38339 666 aa5.99□□□□□ -1.45
VMA6YLR447C GCN5Q03330 439 aa5.99□□□□□ -1.45
VMA6YLR447C CLU1Q03690 1277 aaKnown RBP5.99□□□□□ -1.45
VMA6YLR447C SYP1P25623 870 aaKnown RBP5.98□□□□□ -1.45
VMA6YLR447C POL32P47110 350 aa5.98□□□□□ -1.45
VMA6YLR447C YDR132CQ03900 495 aa5.98□□□□□ -1.45
VMA6YLR447C GSF2Q04697 403 aaKnown RBP5.98□□□□□ -1.45
VMA6YLR447C ROT1Q03691 256 aa5.97□□□□□ -1.45
VMA6YLR447C KIN2P13186 1147 aaKnown RBP5.96□□□□□ -1.46
VMA6YLR447C RAD27P26793 382 aa5.96□□□□□ -1.46
VMA6YLR447C SHM2P37291 469 aaKnown RBP5.96□□□□□ -1.46
VMA6YLR447C TAT2P38967 592 aa5.96□□□□□ -1.46
VMA6YLR447C MPT5P39016 859 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
VMA6YLR447C CNN1P43618 361 aa5.96□□□□□ -1.46
VMA6YLR447C MLS1P30952 554 aa5.95□□□□□ -1.46
VMA6YLR447C PBP1P53297 722 aaKnown RBP5.95□□□□□ -1.46
VMA6YLR447C CMP2P14747 604 aa5.94□□□□□ -1.46
VMA6YLR447C RXT3Q07458 294 aa5.94□□□□□ -1.46
VMA6YLR447C SVS1Q12254 260 aa5.94□□□□□ -1.46
VMA6YLR447C TUB2P02557 457 aaKnown RBP5.93□□□□□ -1.46
VMA6YLR447C GCR1P07261 785 aa5.93□□□□□ -1.46
VMA6YLR447C YER152CP10356 443 aa5.93□□□□□ -1.46
VMA6YLR447C DBP5P20449 482 aaKnown RBP5.93□□□□□ -1.46
VMA6YLR447C CTS1P29029 562 aa5.93□□□□□ -1.46
VMA6YLR447C ABZ1P37254 787 aaPredicted RBP5.93□□□□□ -1.46
VMA6YLR447C HXT13P39924 564 aa5.93□□□□□ -1.46
VMA6YLR447C HXT17P53631 564 aa5.93□□□□□ -1.46
VMA6YLR447C HXT15P54854 567 aa5.93□□□□□ -1.46
VMA6YLR447C APL1P27351 700 aa5.92□□□□□ -1.46
VMA6YLR447C MCM2P29469 868 aa5.92□□□□□ -1.46
VMA6YLR447C PEP7P32609 515 aa5.92□□□□□ -1.46
VMA6YLR447C DOM34P33309 386 aa5.92□□□□□ -1.46
VMA6YLR447C GAL10P04397 699 aa5.91□□□□□ -1.46
VMA6YLR447C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46 RIP-Chip
VMA6YLR447C PLB2Q03674 706 aa5.91□□□□□ -1.46
VMA6YLR447C ESF1Q06344 628 aaKnown RBP5.91□□□□□ -1.46
VMA6YLR447C YFL054CP43549 646 aa5.9□□□□□ -1.46
VMA6YLR447C GNP1P48813 663 aa5.9□□□□□ -1.46
VMA6YLR447C DUS4Q06063 367 aa5.9□□□□□ -1.46
VMA6YLR447C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
VMA6YLR447C GPB1Q08886 897 aa5.9□□□□□ -1.46
VMA6YLR447C BAS1P22035 811 aa5.89□□□□□ -1.47
VMA6YLR447C MCM7P38132 845 aa5.89□□□□□ -1.47
VMA6YLR447C YJR107WP47145 328 aa5.89□□□□□ -1.47
VMA6YLR447C SPR28Q04921 423 aa5.89□□□□□ -1.47
VMA6YLR447C ACK1Q07622 623 aaPredicted RBP5.89□□□□□ -1.47
VMA6YLR447C RTT10Q08924 1013 aa5.89□□□□□ -1.47
VMA6YLR447C ATE1P16639 503 aa5.88□□□□□ -1.47
VMA6YLR447C HEM3P28789 327 aa5.88□□□□□ -1.47
VMA6YLR447C MPH1P40562 993 aa5.88□□□□□ -1.47
VMA6YLR447C ATG13Q06628 738 aa5.88□□□□□ -1.47
VMA6YLR447C TMA46Q12000 345 aaKnown RBP5.88□□□□□ -1.47
VMA6YLR447C THS1P04801 734 aaKnown RBP5.87□□□□□ -1.47
VMA6YLR447C SRM1P21827 482 aa5.87□□□□□ -1.47
VMA6YLR447C RER2P35196 286 aa5.87□□□□□ -1.47
VMA6YLR447C TAF7Q05021 590 aa5.87□□□□□ -1.47
VMA6YLR447C GNT1Q12096 491 aa5.87□□□□□ -1.47
VMA6YLR447C PNS1Q12412 539 aa5.87□□□□□ -1.47
VMA6YLR447C UGA2P38067 497 aa5.86□□□□□ -1.47
VMA6YLR447C TIF35Q04067 274 aaKnown RBP5.86□□□□□ -1.47
VMA6YLR447C URN1Q06525 465 aaKnown RBP5.86□□□□□ -1.47
VMA6YLR447C ACM1Q08981 209 aa5.86□□□□□ -1.47
VMA6YLR447C CDC20P26309 610 aa5.85□□□□□ -1.47
VMA6YLR447C ASF1P32447 279 aa5.85□□□□□ -1.47
VMA6YLR447C GEM1P39722 662 aa5.85□□□□□ -1.47
VMA6YLR447C FYV10P40492 516 aa5.85□□□□□ -1.47
VMA6YLR447C GTF1P53260 183 aaPredicted RBP5.85□□□□□ -1.47
VMA6YLR447C RMD1Q03441 430 aa5.85□□□□□ -1.47
VMA6YLR447C SIZ1Q04195 904 aa5.85□□□□□ -1.47
VMA6YLR447C STE11P23561 717 aa5.84□□□□□ -1.47
VMA6YLR447C TRM2P33753 639 aa5.84□□□□□ -1.47
VMA6YLR447C MXR1P40029 184 aa5.84□□□□□ -1.47
VMA6YLR447C RRT14P40470 206 aa5.84□□□□□ -1.47
VMA6YLR447C MNN10P50108 393 aaKnown RBP5.84□□□□□ -1.47
VMA6YLR447C MCM6P53091 1017 aaKnown RBP5.84□□□□□ -1.47
VMA6YLR447C RIB2Q12362 591 aaKnown RBP5.84□□□□□ -1.47
VMA6YLR447C RPL11AP0C0W9 174 aaKnown RBP5.83□□□□□ -1.48
VMA6YLR447C ACE2P21192 770 aa5.83□□□□□ -1.48
VMA6YLR447C SPP382Q06411 708 aaPredicted RBP5.83□□□□□ -1.48
VMA6YLR447C RPL11BQ3E757 174 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms