RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C SWI6P09959 803 aa2.8□□□□□ -1.96
SIR3YLR442C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SIR3YLR442C UBX7P38349 436 aa2.8□□□□□ -1.96
SIR3YLR442C FIR1P40020 876 aa2.8□□□□□ -1.96
SIR3YLR442C CWC21Q03375 135 aaKnown RBP2.8□□□□□ -1.96
SIR3YLR442C PUF6Q04373 656 aaKnown RBP2.8□□□□□ -1.96
SIR3YLR442C YOL098CQ12496 1037 aa2.8□□□□□ -1.96
SIR3YLR442C MER1P16523 270 aa2.79□□□□□ -1.96
SIR3YLR442C TRX2P22803 104 aaKnown RBP2.79□□□□□ -1.96
SIR3YLR442C WHI3P34761 661 aaKnown RBP2.79□□□□□ -1.96
SIR3YLR442C TTI1P36097 1038 aa2.79□□□□□ -1.96
SIR3YLR442C MEP1P40260 492 aa2.79□□□□□ -1.96
SIR3YLR442C NTA1P40354 457 aa2.79□□□□□ -1.96
SIR3YLR442C OYE3P41816 400 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C TAP42Q04372 366 aa2.79□□□□□ -1.96
SIR3YLR442C JIP5Q06214 492 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C GLE1Q12315 538 aa2.79□□□□□ -1.96
SIR3YLR442C SNU66Q12420 587 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C NSI1Q12457 570 aa2.79□□□□□ -1.96
SIR3YLR442C TCB3Q03640 1545 aaKnown RBP2.79□□□□□ -1.96
SIR3YLR442C PRP6P19735 899 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SIR3YLR442C YKL091CP33324 310 aaKnown RBP2.79□□□□□ -1.96
SIR3YLR442C PEX5P35056 612 aa2.79□□□□□ -1.96
SIR3YLR442C CHZ1P40019 153 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C KAR5Q04746 504 aa2.79□□□□□ -1.96
SIR3YLR442C CLP1Q08685 445 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C APC11Q12157 165 aa2.79□□□□□ -1.96
SIR3YLR442C RUD3Q12234 484 aaKnown RBP2.79□□□□□ -1.96
SIR3YLR442C SSK22P25390 1331 aaPredicted RBP2.79□□□□□ -1.96
SIR3YLR442C VPS24P36095 224 aaKnown RBP2.79□□□□□ -1.96
SIR3YLR442C VTI1Q04338 217 aa2.79□□□□□ -1.96
SIR3YLR442C VPS5Q92331 675 aa2.79□□□□□ -1.96
SIR3YLR442C YEF3P16521 1044 aaKnown RBP2.78□□□□□ -1.96
SIR3YLR442C SRP54P20424 541 aaKnown RBP2.78□□□□□ -1.96
SIR3YLR442C MCM3P24279 971 aaKnown RBP2.78□□□□□ -1.96
SIR3YLR442C SEC6P32844 805 aa2.78□□□□□ -1.96
SIR3YLR442C GPT2P36148 743 aa2.78□□□□□ -1.96
SIR3YLR442C FLR1P38124 548 aa2.78□□□□□ -1.96
SIR3YLR442C DOT6P40059 670 aaKnown RBP2.78□□□□□ -1.96
SIR3YLR442C GYP7P48365 746 aa2.78□□□□□ -1.96
SIR3YLR442C ELA1P53861 379 aaPredicted RBP2.78□□□□□ -1.96
SIR3YLR442C RCM1P53972 490 aa2.78□□□□□ -1.96
SIR3YLR442C ERO1Q03103 563 aa2.78□□□□□ -1.96
SIR3YLR442C GRC3Q07845 632 aa2.78□□□□□ -1.96
SIR3YLR442C THS1P04801 734 aaKnown RBP2.78□□□□□ -1.96
SIR3YLR442C SRS2P12954 1174 aa2.78□□□□□ -1.96
SIR3YLR442C ANP1P32629 500 aa2.78□□□□□ -1.96
SIR3YLR442C KDX1P36005 433 aa2.78□□□□□ -1.96
SIR3YLR442C YAP1801P38856 637 aa2.78□□□□□ -1.96
SIR3YLR442C YHR218WP38899 603 aa2.78□□□□□ -1.96
SIR3YLR442C FET4P40988 552 aa2.78□□□□□ -1.96
SIR3YLR442C ATP22P50273 684 aaPredicted RBP2.78□□□□□ -1.96
SIR3YLR442C YLR352WQ06479 807 aa2.78□□□□□ -1.96
SIR3YLR442C YOR131CQ12486 218 aa2.78□□□□□ -1.96
SIR3YLR442C SMY1P32364 656 aaKnown RBP2.77□□□□□ -1.97
SIR3YLR442C ETP1P38748 585 aaKnown RBP2.77□□□□□ -1.97
SIR3YLR442C UBP12P39538 1254 aa2.77□□□□□ -1.97
SIR3YLR442C MXR1P40029 184 aa2.77□□□□□ -1.97
SIR3YLR442C RRB1Q04225 511 aaKnown RBP2.77□□□□□ -1.97
SIR3YLR442C ERV41Q04651 352 aa2.77□□□□□ -1.97
SIR3YLR442C RPN7Q06103 429 aaKnown RBP2.77□□□□□ -1.97
SIR3YLR442C ACE2P21192 770 aa2.77□□□□□ -1.97
SIR3YLR442C RPC82P32349 654 aa2.77□□□□□ -1.97
SIR3YLR442C PXA2P34230 853 aa2.77□□□□□ -1.97
SIR3YLR442C FAF1P40546 346 aaPredicted RBP2.77□□□□□ -1.97
SIR3YLR442C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97 RIP-Chip
SIR3YLR442C PUN1Q06991 263 aa2.77□□□□□ -1.97
SIR3YLR442C NOB1Q08444 459 aaKnown RBP2.77□□□□□ -1.97
SIR3YLR442C HAT1Q12341 374 aa2.77□□□□□ -1.97
SIR3YLR442C TIF6Q12522 245 aaKnown RBP2.77□□□□□ -1.97
SIR3YLR442C TOM70P07213 617 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C HMG1P12683 1054 aa2.76□□□□□ -1.97
SIR3YLR442C PPX1P38698 397 aa2.76□□□□□ -1.97
SIR3YLR442C PET100P38958 111 aa2.76□□□□□ -1.97
SIR3YLR442C TIF4631P39935 952 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C SDS3P40505 327 aa2.76□□□□□ -1.97
SIR3YLR442C BTN2P53286 410 aa2.76□□□□□ -1.97
SIR3YLR442C ALG12P53730 551 aa2.76□□□□□ -1.97
SIR3YLR442C PNG1Q02890 363 aa2.76□□□□□ -1.97
SIR3YLR442C APC2Q12440 853 aa2.76□□□□□ -1.97
SIR3YLR442C RTP1Q12751 981 aa2.76□□□□□ -1.97
SIR3YLR442C NAT1P12945 854 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C MEF1P25039 761 aa2.76□□□□□ -1.97
SIR3YLR442C GFD2P25370 566 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C DEP1P31385 405 aa2.76□□□□□ -1.97
SIR3YLR442C PYC2P32327 1180 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C NIP100P33420 868 aa2.76□□□□□ -1.97
SIR3YLR442C YKL100CP34248 587 aa2.76□□□□□ -1.97
SIR3YLR442C CCL1P37366 393 aa2.76□□□□□ -1.97
SIR3YLR442C RRP8P38961 392 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C BUD27P43573 796 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
SIR3YLR442C GCV1P48015 400 aa2.76□□□□□ -1.97
SIR3YLR442C UTP14Q04500 899 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C SLK19Q08581 821 aaKnown RBP2.76□□□□□ -1.97
SIR3YLR442C NYV1Q12255 253 aa2.76□□□□□ -1.97
SIR3YLR442C APN1P22936 367 aa2.75□□□□□ -1.97
SIR3YLR442C HIR2P32480 875 aa2.75□□□□□ -1.97
SIR3YLR442C IME2P32581 645 aa2.75□□□□□ -1.97
SIR3YLR442C NFU1P32860 256 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms