RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	ENT3	P47160	408 aa		4.7	□□□□□ -1.66
BER1	YLR412W	RTT10	Q08924	1013 aa		4.7	□□□□□ -1.66
BER1	YLR412W	PET112	P33893	541 aa		4.69	□□□□□ -1.66
BER1	YLR412W	RCL1	Q08096	367 aa	Predicted RBP	4.69	□□□□□ -1.66
BER1	YLR412W	SPO21	Q12411	609 aa		4.69	□□□□□ -1.66
BER1	YLR412W	SRO9	P25567	434 aa	Known RBP	4.68	□□□□□ -1.66
BER1	YLR412W	AIM26	P32858	118 aa		4.68	□□□□□ -1.66
BER1	YLR412W	RER2	P35196	286 aa		4.68	□□□□□ -1.66
BER1	YLR412W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
BER1	YLR412W	YPL260W	Q08977	551 aa		4.68	□□□□□ -1.66
BER1	YLR412W	COQ4	O13525	335 aa		4.67	□□□□□ -1.66
BER1	YLR412W	MLS1	P30952	554 aa		4.67	□□□□□ -1.66
BER1	YLR412W	CNN1	P43618	361 aa		4.67	□□□□□ -1.66
BER1	YLR412W	FOL2	P51601	243 aa	Known RBP	4.67	□□□□□ -1.66
BER1	YLR412W	TNA1	P53322	534 aa		4.67	□□□□□ -1.66
BER1	YLR412W	HOS3	Q02959	697 aa	Known RBP	4.67	□□□□□ -1.66
BER1	YLR412W	DBP5	P20449	482 aa	Known RBP	4.66	□□□□□ -1.66
BER1	YLR412W	DUT1	P33317	147 aa		4.66	□□□□□ -1.66
BER1	YLR412W	RGD1	P38339	666 aa		4.66	□□□□□ -1.66
BER1	YLR412W	GSF2	Q04697	403 aa	Known RBP	4.66	□□□□□ -1.66
BER1	YLR412W	RSC58	Q07979	502 aa		4.66	□□□□□ -1.66
BER1	YLR412W	TMA46	Q12000	345 aa	Known RBP	4.66	□□□□□ -1.66
BER1	YLR412W	TAD3	Q9URQ3	322 aa		4.66	□□□□□ -1.66
BER1	YLR412W	YER152C	P10356	443 aa		4.65	□□□□□ -1.67
BER1	YLR412W	CDC34	P14682	295 aa		4.65	□□□□□ -1.67
BER1	YLR412W	ETP1	P38748	585 aa	Known RBP	4.65	□□□□□ -1.67
BER1	YLR412W	TIF35	Q04067	274 aa	Known RBP	4.65	□□□□□ -1.67
BER1	YLR412W	NBA1	Q08229	501 aa	Known RBP	4.65	□□□□□ -1.67
BER1	YLR412W	YDL177C	Q12257	170 aa		4.65	□□□□□ -1.67
BER1	YLR412W	SNF5	P18480	905 aa		4.64	□□□□□ -1.67
BER1	YLR412W	MNR2	P35724	969 aa		4.64	□□□□□ -1.67
BER1	YLR412W	BAP2	P38084	609 aa		4.64	□□□□□ -1.67
BER1	YLR412W	MCM7	P38132	845 aa		4.64	□□□□□ -1.67
BER1	YLR412W	CCZ1	P38273	704 aa		4.64	□□□□□ -1.67
BER1	YLR412W	RPN3	P40016	523 aa	Known RBP	4.64	□□□□□ -1.67
BER1	YLR412W	MPH1	P40562	993 aa		4.64	□□□□□ -1.67
BER1	YLR412W	YFL054C	P43549	646 aa		4.64	□□□□□ -1.67
BER1	YLR412W	MRPL22	P53881	309 aa		4.64	□□□□□ -1.67
BER1	YLR412W	EEB1	Q02891	456 aa		4.64	□□□□□ -1.67
BER1	YLR412W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
BER1	YLR412W	RSB1	Q08417	382 aa		4.64	□□□□□ -1.67
BER1	YLR412W	SPS1	P08458	490 aa		4.63	□□□□□ -1.67
BER1	YLR412W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
BER1	YLR412W	PIK1	P39104	1066 aa		4.63	□□□□□ -1.67
BER1	YLR412W	TRP2	P00899	507 aa	Known RBP	4.62	□□□□□ -1.67
BER1	YLR412W	LYP1	P32487	611 aa		4.62	□□□□□ -1.67
BER1	YLR412W	MOT2	P34909	587 aa	Known RBP	4.62	□□□□□ -1.67
BER1	YLR412W	MET10	P39692	1035 aa		4.62	□□□□□ -1.67
BER1	YLR412W	HNT2	P49775	206 aa		4.62	□□□□□ -1.67
BER1	YLR412W	TYW3	P53177	273 aa		4.62	□□□□□ -1.67
BER1	YLR412W	AIM3	P38266	947 aa	Known RBP	4.61	□□□□□ -1.67
BER1	YLR412W	RIM8	P53179	542 aa		4.61	□□□□□ -1.67
BER1	YLR412W	JIP5	Q06214	492 aa	Predicted RBP	4.61	□□□□□ -1.67
BER1	YLR412W	INO1	P11986	533 aa		4.6	□□□□□ -1.67
BER1	YLR412W	MXR1	P40029	184 aa		4.6	□□□□□ -1.67
BER1	YLR412W	MAD1	P40957	749 aa		4.6	□□□□□ -1.67
BER1	YLR412W	FAA4	P47912	694 aa	Known RBP	4.6	□□□□□ -1.67
BER1	YLR412W	SNU71	P53207	620 aa	Known RBP	4.6	□□□□□ -1.67
BER1	YLR412W	SNO2	P53823	222 aa		4.6	□□□□□ -1.67
BER1	YLR412W	GDE1	Q02979	1223 aa		4.6	□□□□□ -1.67
BER1	YLR412W	GNT1	Q12096	491 aa		4.6	□□□□□ -1.67
BER1	YLR412W	ABZ1	P37254	787 aa	Predicted RBP	4.59	□□□□□ -1.67
BER1	YLR412W	SEC26	P41810	973 aa	Known RBP	4.59	□□□□□ -1.67
BER1	YLR412W	YGR053C	P53234	283 aa		4.59	□□□□□ -1.67
BER1	YLR412W	ENV11	P53246	860 aa		4.59	□□□□□ -1.67
BER1	YLR412W	CWC24	P53769	259 aa		4.59	□□□□□ -1.67
BER1	YLR412W	YLR225C	Q05948	407 aa	Known RBP	4.59	□□□□□ -1.67
BER1	YLR412W	RPL11A	P0C0W9	174 aa	Known RBP	4.58	□□□□□ -1.68
BER1	YLR412W	CLN2	P20438	545 aa		4.58	□□□□□ -1.68
BER1	YLR412W	BAS1	P22035	811 aa		4.58	□□□□□ -1.68
BER1	YLR412W	DBP2	P24783	546 aa	Known RBP	4.58	□□□□□ -1.68
BER1	YLR412W	VPS16	Q03308	798 aa		4.58	□□□□□ -1.68
BER1	YLR412W	SPO20	Q04359	397 aa		4.58	□□□□□ -1.68
BER1	YLR412W	SVF1	Q05515	481 aa		4.58	□□□□□ -1.68
BER1	YLR412W	SPP382	Q06411	708 aa	Predicted RBP	4.58	□□□□□ -1.68
BER1	YLR412W	YPL066W	Q12194	479 aa		4.58	□□□□□ -1.68
BER1	YLR412W	RPL11B	Q3E757	174 aa	Predicted RBP	4.58	□□□□□ -1.68
BER1	YLR412W	NAP1	P25293	417 aa	Known RBP	4.57	□□□□□ -1.68
BER1	YLR412W	YPT53	P36019	220 aa		4.57	□□□□□ -1.68
BER1	YLR412W	YGL176C	P46945	554 aa		4.57	□□□□□ -1.68
BER1	YLR412W	ESC2	Q06340	456 aa		4.57	□□□□□ -1.68
BER1	YLR412W	PIN2	Q12057	282 aa		4.57	□□□□□ -1.68
BER1	YLR412W	RKM4	Q12504	494 aa		4.57	□□□□□ -1.68
BER1	YLR412W	YKL107W	P34251	309 aa		4.56	□□□□□ -1.68
BER1	YLR412W	UGA2	P38067	497 aa		4.56	□□□□□ -1.68
BER1	YLR412W	RFC5	P38251	354 aa		4.56	□□□□□ -1.68
BER1	YLR412W	PNT1	P38969	423 aa		4.56	□□□□□ -1.68
BER1	YLR412W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
BER1	YLR412W	YOR352W	Q08816	343 aa		4.56	□□□□□ -1.68
BER1	YLR412W	ACM1	Q08981	209 aa		4.56	□□□□□ -1.68
BER1	YLR412W	YPL277C	Q08989	487 aa		4.56	□□□□□ -1.68
BER1	YLR412W	SVS1	Q12254	260 aa		4.56	□□□□□ -1.68
BER1	YLR412W	CYC1	P00044	109 aa	Predicted RBP	4.55	□□□□□ -1.68
BER1	YLR412W	SOD2	P00447	233 aa		4.55	□□□□□ -1.68
BER1	YLR412W	RPS13	P05756	151 aa	Known RBP	4.55	□□□□□ -1.68
BER1	YLR412W	ABD1	P32783	436 aa	Predicted RBP	4.55	□□□□□ -1.68
BER1	YLR412W	RSM24	Q03976	319 aa		4.55	□□□□□ -1.68
BER1	YLR412W	FAL1	Q12099	399 aa	Known RBP	4.55	□□□□□ -1.68
BER1	YLR412W	BI4	P03879	638 aa		4.54	□□□□□ -1.68
BER1	YLR412W	TOD6	P34219	525 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms