RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C RAV1P47104 1357 aa7.9□□□□□ -1.15
AFG2YLR397C PRP4P20053 465 aaKnown RBP7.9□□□□□ -1.15
AFG2YLR397C SCJ1P25303 377 aa7.9□□□□□ -1.15
AFG2YLR397C RAD5P32849 1169 aaPredicted RBP7.9□□□□□ -1.15
AFG2YLR397C TRZ1P36159 838 aaPredicted RBP7.9□□□□□ -1.15
AFG2YLR397C UTP18P40362 594 aaPredicted RBP7.9□□□□□ -1.15
AFG2YLR397C CKB1P43639 278 aa7.9□□□□□ -1.15
AFG2YLR397C SRB7P47822 140 aa7.9□□□□□ -1.15
AFG2YLR397C YNL144CP53907 740 aa7.9□□□□□ -1.15
AFG2YLR397C TAF12Q03761 539 aa7.9□□□□□ -1.15
AFG2YLR397C DCS1Q06151 350 aa7.9□□□□□ -1.15
AFG2YLR397C OSW1Q08692 278 aa7.9□□□□□ -1.15
AFG2YLR397C ENO2P00925 437 aaKnown RBP7.89□□□□□ -1.15
AFG2YLR397C SSC1P0CS90 654 aaKnown RBP7.89□□□□□ -1.15
AFG2YLR397C HSM3P38348 480 aa7.89□□□□□ -1.15
AFG2YLR397C YBR287WP38355 427 aa7.89□□□□□ -1.15
AFG2YLR397C UBP12P39538 1254 aa7.89□□□□□ -1.15
AFG2YLR397C GCD14P46959 383 aaPredicted RBP7.89□□□□□ -1.15
AFG2YLR397C ZDS1P50111 915 aaKnown RBP7.89□□□□□ -1.15
AFG2YLR397C RTC4P53850 401 aa7.89□□□□□ -1.15
AFG2YLR397C RTT10Q08924 1013 aa7.89□□□□□ -1.15
AFG2YLR397C ADE3P07245 946 aaKnown RBP7.89□□□□□ -1.15
AFG2YLR397C PRP6P19735 899 aaPredicted RBP7.89□□□□□ -1.15
AFG2YLR397C MSH2P25847 964 aa7.89□□□□□ -1.15
AFG2YLR397C DPB3P27344 201 aa7.89□□□□□ -1.15
AFG2YLR397C UGA2P38067 497 aa7.89□□□□□ -1.15
AFG2YLR397C PSY4P38193 441 aa7.89□□□□□ -1.15
AFG2YLR397C STN1P38960 494 aa7.89□□□□□ -1.15
AFG2YLR397C CAJ1P39101 391 aa7.89□□□□□ -1.15
AFG2YLR397C ARB1P40024 610 aaKnown RBP7.89□□□□□ -1.15
AFG2YLR397C RPT2P40327 437 aaKnown RBP7.89□□□□□ -1.15
AFG2YLR397C SNX4P47057 423 aa7.89□□□□□ -1.15
AFG2YLR397C SGM1P47166 707 aa7.89□□□□□ -1.15
AFG2YLR397C ISM1P48526 1002 aa7.89□□□□□ -1.15
AFG2YLR397C FIN1Q03898 291 aa7.89□□□□□ -1.15
AFG2YLR397C PEP7P32609 515 aa7.88□□□□□ -1.15
AFG2YLR397C YHR020WP38708 688 aaKnown RBP7.88□□□□□ -1.15
AFG2YLR397C SPO1P53541 631 aa7.88□□□□□ -1.15
AFG2YLR397C SOG2Q08817 791 aa7.88□□□□□ -1.15
AFG2YLR397C BBP1Q12365 385 aa7.88□□□□□ -1.15
AFG2YLR397C YIL002W-AQ3E7Z5 69 aa7.88□□□□□ -1.15
AFG2YLR397C DUR1,2P32528 1835 aaKnown RBP7.88□□□□□ -1.15
AFG2YLR397C KRE5P22023 1365 aa7.88□□□□□ -1.15
AFG2YLR397C RPA135P22138 1203 aaKnown RBP7.87□□□□□ -1.15
AFG2YLR397C PRD1P25375 712 aa7.87□□□□□ -1.15
AFG2YLR397C OCT1P35999 772 aa7.87□□□□□ -1.15
AFG2YLR397C ESL2P36168 1195 aa7.87□□□□□ -1.15
AFG2YLR397C PES4P39684 611 aa7.87□□□□□ -1.15
AFG2YLR397C KAP123P40069 1113 aaKnown RBP7.87□□□□□ -1.15
AFG2YLR397C ALG2P43636 503 aa7.87□□□□□ -1.15
AFG2YLR397C IML2P47031 731 aa7.87□□□□□ -1.15
AFG2YLR397C HFM1P51979 1187 aa7.87□□□□□ -1.15
AFG2YLR397C ENT2Q05785 613 aa7.87□□□□□ -1.15
AFG2YLR397C SNU66Q12420 587 aaPredicted RBP7.87□□□□□ -1.15
AFG2YLR397C RPO41P13433 1351 aaKnown RBP7.87□□□□□ -1.15
AFG2YLR397C DSF1P0CX08 502 aa7.87□□□□□ -1.15
AFG2YLR397C YNR073CP0CX09 502 aa7.87□□□□□ -1.15
AFG2YLR397C RPL19AP0CX82 189 aaKnown RBP7.87□□□□□ -1.15
AFG2YLR397C RPL19BP0CX83 189 aaPredicted RBP7.87□□□□□ -1.15
AFG2YLR397C URE2P23202 354 aaKnown RBP7.87□□□□□ -1.15
AFG2YLR397C RDS1P25611 832 aa7.87□□□□□ -1.15
AFG2YLR397C APL1P27351 700 aa7.87□□□□□ -1.15
AFG2YLR397C BMH1P29311 267 aaKnown RBP7.87□□□□□ -1.15
AFG2YLR397C HSP78P33416 811 aa7.87□□□□□ -1.15
AFG2YLR397C ELA1P53861 379 aaPredicted RBP7.87□□□□□ -1.15
AFG2YLR397C UFD2P54860 961 aa7.87□□□□□ -1.15
AFG2YLR397C GIR2Q03768 265 aaPredicted RBP7.87□□□□□ -1.15
AFG2YLR397C SEN2P16658 377 aa7.86□□□□□ -1.15
AFG2YLR397C TFC4P33339 1025 aa7.86□□□□□ -1.15
AFG2YLR397C NIP100P33420 868 aa7.86□□□□□ -1.15
AFG2YLR397C LIN1P38852 340 aaPredicted RBP7.86□□□□□ -1.15
AFG2YLR397C SMF1P38925 575 aa7.86□□□□□ -1.15
AFG2YLR397C DML1Q03652 475 aa7.86□□□□□ -1.15
AFG2YLR397C ARP9Q05123 467 aa7.86□□□□□ -1.15
AFG2YLR397C SGT2Q12118 346 aaKnown RBP7.86□□□□□ -1.15
AFG2YLR397C CDC16P09798 840 aa7.86□□□□□ -1.15
AFG2YLR397C TAL1P15019 335 aaKnown RBP7.86□□□□□ -1.15
AFG2YLR397C BMH2P34730 273 aaKnown RBP7.86□□□□□ -1.15
AFG2YLR397C APL2P36000 726 aaPredicted RBP7.86□□□□□ -1.15
AFG2YLR397C YBR242WP38331 238 aa7.86□□□□□ -1.15
AFG2YLR397C RRM3P38766 723 aa7.86□□□□□ -1.15
AFG2YLR397C FAF1P40546 346 aaPredicted RBP7.86□□□□□ -1.15
AFG2YLR397C LSG1P53145 640 aaKnown RBP7.86□□□□□ -1.15
AFG2YLR397C PCL8Q08966 492 aa7.86□□□□□ -1.15
AFG2YLR397C CEX1Q12453 761 aa7.86□□□□□ -1.15
AFG2YLR397C YRF1-4O13559 1382 aa7.86□□□□□ -1.15
AFG2YLR397C YML133CQ03099 1374 aa7.86□□□□□ -1.15
AFG2YLR397C YLL067CQ07888 1374 aa7.86□□□□□ -1.15
AFG2YLR397C YLL066CQ99208 1374 aa7.86□□□□□ -1.15
AFG2YLR397C TY1B-BRQ12193 1756 aa7.85□□□□□ -1.15
AFG2YLR397C TY1B-GR3Q12316 1755 aa7.85□□□□□ -1.15
AFG2YLR397C TY1B-ORQ92393 1755 aa7.85□□□□□ -1.15
AFG2YLR397C PDC1P06169 563 aaKnown RBP7.85□□□□□ -1.15
AFG2YLR397C PDE2P06776 526 aa7.85□□□□□ -1.15
AFG2YLR397C VMA2P16140 517 aaKnown RBP7.85□□□□□ -1.15
AFG2YLR397C PHO3P24031 467 aa7.85□□□□□ -1.15
AFG2YLR397C PUF4P25339 888 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
AFG2YLR397C GSY2P27472 705 aa7.85□□□□□ -1.15
AFG2YLR397C VPH2P32341 215 aa7.85□□□□□ -1.15
AFG2YLR397C PLC1P32383 869 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms