RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C BCD1P38772 366 aa10.19□□□□□ -0.78
SEC61YLR378C MGA2P40578 1113 aa10.19□□□□□ -0.78
SEC61YLR378C RRT6P53117 311 aaPredicted RBP10.19□□□□□ -0.78
SEC61YLR378C OYE2Q03558 400 aaKnown RBP10.19□□□□□ -0.78
SEC61YLR378C ESC2Q06340 456 aa10.19□□□□□ -0.78
SEC61YLR378C CDC37P06101 506 aaKnown RBP10.18□□□□□ -0.78
SEC61YLR378C PET10P36139 283 aa10.18□□□□□ -0.78
SEC61YLR378C ISW1P38144 1129 aa10.18□□□□□ -0.78
SEC61YLR378C ROG3P43602 733 aa10.18□□□□□ -0.78
SEC61YLR378C ILV1P00927 576 aaKnown RBP10.17□□□□□ -0.78
SEC61YLR378C FBP1P09201 348 aa10.17□□□□□ -0.78
SEC61YLR378C UGA4P32837 571 aa10.17□□□□□ -0.78
SEC61YLR378C YKR018CP36114 725 aa10.17□□□□□ -0.78
SEC61YLR378C PSY4P38193 441 aa10.17□□□□□ -0.78
SEC61YLR378C NDT80P38830 627 aa10.17□□□□□ -0.78
SEC61YLR378C YGR237CP50089 785 aa10.17□□□□□ -0.78
SEC61YLR378C LIF1P53150 421 aa10.17□□□□□ -0.78
SEC61YLR378C ADY4Q05955 493 aa10.17□□□□□ -0.78
SEC61YLR378C TFC8Q12308 588 aa10.17□□□□□ -0.78
SEC61YLR378C YJL007CP47080 104 aa10.16□□□□□ -0.78
SEC61YLR378C PEX29Q03370 554 aa10.16□□□□□ -0.78
SEC61YLR378C SPP382Q06411 708 aaPredicted RBP10.16□□□□□ -0.78
SEC61YLR378C MIP1P15801 1254 aa10.16□□□□□ -0.78
SEC61YLR378C MSH3P25336 1018 aa10.16□□□□□ -0.78
SEC61YLR378C MRC1P25588 1096 aa10.16□□□□□ -0.78
SEC61YLR378C SPC110P32380 944 aa10.16□□□□□ -0.78
SEC61YLR378C PGM1P33401 570 aaKnown RBP10.16□□□□□ -0.78
SEC61YLR378C MNN4P36044 1178 aa10.16□□□□□ -0.78
SEC61YLR378C PNT1P38969 423 aa10.16□□□□□ -0.78
SEC61YLR378C FYV8P46949 817 aaKnown RBP10.16□□□□□ -0.78
SEC61YLR378C PEX21P50091 288 aa10.16□□□□□ -0.78
SEC61YLR378C VPS75P53853 264 aa10.16□□□□□ -0.78
SEC61YLR378C CNM67P53865 581 aaKnown RBP10.16□□□□□ -0.78
SEC61YLR378C ALD6P54115 500 aaKnown RBP10.16□□□□□ -0.78
SEC61YLR378C ORC4P54791 529 aa10.16□□□□□ -0.78
SEC61YLR378C UBX5Q06682 500 aa10.16□□□□□ -0.78
SEC61YLR378C TMA16Q08687 178 aa10.16□□□□□ -0.78
SEC61YLR378C ARP6Q12509 438 aa10.16□□□□□ -0.78
SEC61YLR378C TY1B-AO13527 1196 aaKnown RBP10.15□□□□□ -0.79
SEC61YLR378C TGL1P34163 548 aa10.15□□□□□ -0.79
SEC61YLR378C MCD4P36051 919 aa10.15□□□□□ -0.79
SEC61YLR378C SPT8P38915 602 aa10.15□□□□□ -0.79
SEC61YLR378C HUL5P53119 910 aa10.15□□□□□ -0.79
SEC61YLR378C YAF9P53930 226 aa10.15□□□□□ -0.79
SEC61YLR378C GUD1Q07729 489 aa10.15□□□□□ -0.79
SEC61YLR378C RKM4Q12504 494 aa10.15□□□□□ -0.79
SEC61YLR378C SAM1P10659 382 aaKnown RBP10.14□□□□□ -0.79
SEC61YLR378C OM45P16547 393 aa10.14□□□□□ -0.79
SEC61YLR378C ISY1P21374 235 aaPredicted RBP10.14□□□□□ -0.79
SEC61YLR378C RAM2P29703 316 aa10.14□□□□□ -0.79
SEC61YLR378C PSO2P30620 661 aa10.14□□□□□ -0.79
SEC61YLR378C YKL091CP33324 310 aaKnown RBP10.14□□□□□ -0.79
SEC61YLR378C LEO1P38439 464 aa10.14□□□□□ -0.79
SEC61YLR378C SIP3P38717 1229 aa10.14□□□□□ -0.79
SEC61YLR378C CTM1P38818 585 aa10.14□□□□□ -0.79
SEC61YLR378C NUP82P40368 713 aa10.14□□□□□ -0.79
SEC61YLR378C PGA2P53903 129 aa10.14□□□□□ -0.79
SEC61YLR378C SEC5P89102 971 aa10.14□□□□□ -0.79
SEC61YLR378C EBS1Q03466 884 aaKnown RBP10.14□□□□□ -0.79
SEC61YLR378C TMA64Q04600 565 aaKnown RBP10.14□□□□□ -0.79
SEC61YLR378C SPH1Q06160 661 aa10.14□□□□□ -0.79
SEC61YLR378C FKS1P38631 1876 aaKnown RBP10.13□□□□□ -0.79
SEC61YLR378C PDC1P06169 563 aaKnown RBP10.13□□□□□ -0.79
SEC61YLR378C YEL076C-AP0CX16 216 aa10.13□□□□□ -0.79
SEC61YLR378C YLR464WP0CX17 216 aa10.13□□□□□ -0.79
SEC61YLR378C YDJ1P25491 409 aaKnown RBP10.13□□□□□ -0.79
SEC61YLR378C MFT1P33441 392 aaKnown RBP10.13□□□□□ -0.79
SEC61YLR378C YET1P35723 206 aa10.13□□□□□ -0.79
SEC61YLR378C ERG7P38604 731 aa10.13□□□□□ -0.79
SEC61YLR378C YEL076CP39971 216 aa10.13□□□□□ -0.79
SEC61YLR378C YIL089WP40500 205 aa10.13□□□□□ -0.79
SEC61YLR378C NET1P47035 1189 aa10.13□□□□□ -0.79
SEC61YLR378C CTR9P89105 1077 aa10.13□□□□□ -0.79
SEC61YLR378C FUS2Q05670 677 aa10.13□□□□□ -0.79
SEC61YLR378C TYW1Q08960 810 aaKnown RBP10.13□□□□□ -0.79
SEC61YLR378C PHR1P05066 565 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
SEC61YLR378C VMA2P16140 517 aaKnown RBP10.12□□□□□ -0.79
SEC61YLR378C PPS1P38148 807 aa10.12□□□□□ -0.79
SEC61YLR378C LSC2P53312 427 aa10.12□□□□□ -0.79
SEC61YLR378C YCG1Q06680 1035 aa10.12□□□□□ -0.79
SEC61YLR378C CLN3P13365 580 aa10.11□□□□□ -0.79
SEC61YLR378C PHO13P19881 312 aa10.11□□□□□ -0.79
SEC61YLR378C MCR1P36060 302 aaKnown RBP10.11□□□□□ -0.79
SEC61YLR378C PIH1P38768 344 aa10.11□□□□□ -0.79
SEC61YLR378C YFL034WP43564 1073 aa10.11□□□□□ -0.79
SEC61YLR378C STU2P46675 888 aa10.11□□□□□ -0.79
SEC61YLR378C GUP1P53154 560 aa10.11□□□□□ -0.79
SEC61YLR378C PHM6Q05637 104 aa10.11□□□□□ -0.79
SEC61YLR378C PGK1P00560 416 aaKnown RBP10.1□□□□□ -0.79
SEC61YLR378C SRD1P09007 221 aa10.1□□□□□ -0.79
SEC61YLR378C PFK1P16861 987 aaKnown RBP10.1□□□□□ -0.79
SEC61YLR378C GPB2P39717 880 aa10.1□□□□□ -0.79
SEC61YLR378C AIP1P46680 615 aaKnown RBP10.1□□□□□ -0.79
SEC61YLR378C CFT2Q12102 859 aaPredicted RBP10.1□□□□□ -0.79
SEC61YLR378C CDC19P00549 500 aaKnown RBP10.09□□□□□ -0.79
SEC61YLR378C SEC65P29478 273 aa10.09□□□□□ -0.79
SEC61YLR378C CLB5P30283 435 aa10.09□□□□□ -0.79
SEC61YLR378C MNR2P35724 969 aa10.09□□□□□ -0.79
SEC61YLR378C PCS60P38137 543 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
SEC61YLR378C RPN3P40016 523 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms