RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	PRP16	P15938	1071 aa	Predicted RBP	4.84	□□□□□ -1.63
NUP2	YLR335W	CKA2	P19454	339 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	PDC6	P26263	563 aa	Known RBP	4.84	□□□□□ -1.63
NUP2	YLR335W	PSO2	P30620	661 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	LAS1	P36146	502 aa	Predicted RBP	4.84	□□□□□ -1.63
NUP2	YLR335W	PES4	P39684	611 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	YJR039W	P47107	1121 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	CWC22	P53333	577 aa	Known RBP	4.84	□□□□□ -1.63
NUP2	YLR335W	RET3	P53600	189 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	INM2	Q05533	292 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	SMC6	Q12749	1114 aa		4.84	□□□□□ -1.63
NUP2	YLR335W	CHO2	P05374	869 aa	Known RBP	4.84	□□□□□ -1.64
NUP2	YLR335W	TOM70	P07213	617 aa	Known RBP	4.84	□□□□□ -1.64
NUP2	YLR335W	MAK16	P10962	306 aa	Predicted RBP	4.84	□□□□□ -1.64
NUP2	YLR335W	OM45	P16547	393 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	RAD53	P22216	821 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	RPC53	P25441	422 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	MGM1	P32266	881 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	SEC8	P32855	1065 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	CCT3	P39077	534 aa	Known RBP	4.84	□□□□□ -1.64
NUP2	YLR335W	LYS14	P40971	790 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	ILM1	P47155	203 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	UBA2	P52488	636 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	BTN2	P53286	410 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	NCS2	P53923	493 aa	Predicted RBP	4.84	□□□□□ -1.64
NUP2	YLR335W	EEB1	Q02891	456 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	SOV1	Q04748	898 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	THI3	Q07471	609 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	LAM6	Q08001	693 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	YOR111W	Q99210	232 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	RAD61	Q99359	647 aa		4.84	□□□□□ -1.64
NUP2	YLR335W	FAS2	P19097	1887 aa	Known RBP	4.84	□□□□□ -1.64
NUP2	YLR335W	TUS1	Q06412	1307 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	PMR1	P13586	950 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	MAK11	P20484	414 aa	Known RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	MRM1	P25270	412 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	PSE1	P32337	1089 aa	Known RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	RAD5	P32849	1169 aa	Predicted RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	LOS1	P33418	1100 aa	Predicted RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	YKR075C	P36155	307 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	PTC4	P38089	393 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	STT3	P39007	718 aa	Known RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	SAP1	P39955	897 aa	Known RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	YDR338C	Q05497	695 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	TSR1	Q07381	788 aa	Known RBP	4.83	□□□□□ -1.64
NUP2	YLR335W	RIM15	P43565	1770 aa		4.83	□□□□□ -1.64
NUP2	YLR335W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
NUP2	YLR335W	APL1	P27351	700 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	PAP1	P29468	568 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	SMY1	P32364	656 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	ICP55	P40051	511 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	IES1	P43579	692 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	LSC2	P53312	427 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	RPT6	Q01939	405 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	TAF10	Q12030	206 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	GRE2	Q12068	342 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	TY4A-H	Q6Q5P6	413 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	CIT1	P00890	479 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	SSB1	P11484	613 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	CDC60	P26637	1090 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	SEC20	P28791	383 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	SWE1	P32944	819 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
NUP2	YLR335W	YKL091C	P33324	310 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	SAS3	P34218	831 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	ISW1	P38144	1129 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	MRX1	P40050	688 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	SSB2	P40150	613 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	RPS0B	P46654	252 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	PTK2	P47116	818 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	YGR153W	P48238	217 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	YNL035C	P53962	389 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	HDA1	P53973	706 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	FOX2	Q02207	900 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	SYF1	Q04048	859 aa	Predicted RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	YMR114C	Q04471	368 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	CSM3	Q04659	317 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	SPO75	Q07798	868 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	SLK19	Q08581	821 aa	Known RBP	4.82	□□□□□ -1.64
NUP2	YLR335W	YBL029C-A	Q3E756	94 aa		4.82	□□□□□ -1.64
NUP2	YLR335W	RAD3	P06839	778 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	MIP1	P15801	1254 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	RIT1	P23796	513 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	CDC11	P32458	415 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	ZUO1	P32527	433 aa	Known RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	PRP40	P33203	583 aa	Known RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	SIC1	P38634	284 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	CSM2	P40465	213 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	YIR042C	P40586	236 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	RPC17	P47076	161 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	PIP2	P52960	996 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	SDA1	P53313	767 aa	Known RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	TOF1	P53840	1238 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	TRS120	Q04183	1289 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	ECI1	Q05871	280 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	YPR078C	Q06813	372 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	YPL260W	Q08977	551 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	ZRT2	Q12436	422 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	GAL11	P19659	1081 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	DAL7	P21826	554 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms