RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W MLS1P30952 554 aa5.88□□□□□ -1.47
SMD2YLR275W AIM26P32858 118 aa5.88□□□□□ -1.47
SMD2YLR275W CCZ1P38273 704 aa5.88□□□□□ -1.47
SMD2YLR275W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
SMD2YLR275W RSC58Q07979 502 aa5.88□□□□□ -1.47
SMD2YLR275W SEG2P34250 1132 aa5.87□□□□□ -1.47
SMD2YLR275W BAP2P38084 609 aa5.87□□□□□ -1.47
SMD2YLR275W MET10P39692 1035 aa5.87□□□□□ -1.47
SMD2YLR275W MPH1P40562 993 aa5.87□□□□□ -1.47
SMD2YLR275W SNU71P53207 620 aaKnown RBP5.87□□□□□ -1.47
SMD2YLR275W TIF35Q04067 274 aaKnown RBP5.87□□□□□ -1.47
SMD2YLR275W SVF1Q05515 481 aa5.87□□□□□ -1.47
SMD2YLR275W AOS1Q06624 347 aa5.87□□□□□ -1.47
SMD2YLR275W RCL1Q08096 367 aaPredicted RBP5.87□□□□□ -1.47
SMD2YLR275W PUF4P25339 888 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SMD2YLR275W LYP1P32487 611 aa5.86□□□□□ -1.47
SMD2YLR275W MCM7P38132 845 aa5.86□□□□□ -1.47
SMD2YLR275W HNT2P49775 206 aa5.86□□□□□ -1.47
SMD2YLR275W FOL2P51601 243 aaKnown RBP5.86□□□□□ -1.47
SMD2YLR275W EEB1Q02891 456 aa5.86□□□□□ -1.47
SMD2YLR275W TRP2P00899 507 aaKnown RBP5.85□□□□□ -1.47
SMD2YLR275W YER152CP10356 443 aa5.85□□□□□ -1.47
SMD2YLR275W SNF5P18480 905 aa5.85□□□□□ -1.47
SMD2YLR275W CLN2P20438 545 aa5.85□□□□□ -1.47
SMD2YLR275W ELM1P32801 640 aa5.85□□□□□ -1.47
SMD2YLR275W PIK1P39104 1066 aa5.85□□□□□ -1.47
SMD2YLR275W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
SMD2YLR275W SPS1P08458 490 aa5.84□□□□□ -1.47
SMD2YLR275W MAD1P40957 749 aa5.84□□□□□ -1.47
SMD2YLR275W TYW3P53177 273 aa5.84□□□□□ -1.47
SMD2YLR275W JIP5Q06214 492 aaPredicted RBP5.84□□□□□ -1.47
SMD2YLR275W IRC24P40580 263 aa5.83□□□□□ -1.48
SMD2YLR275W RSB1Q08417 382 aa5.83□□□□□ -1.48
SMD2YLR275W PIN2Q12057 282 aa5.83□□□□□ -1.48
SMD2YLR275W GNT1Q12096 491 aa5.83□□□□□ -1.48
SMD2YLR275W ETP1P38748 585 aaKnown RBP5.82□□□□□ -1.48
SMD2YLR275W YFL054CP43549 646 aa5.82□□□□□ -1.48
SMD2YLR275W FAA4P47912 694 aaKnown RBP5.82□□□□□ -1.48
SMD2YLR275W YGR053CP53234 283 aa5.82□□□□□ -1.48
SMD2YLR275W VPS16Q03308 798 aa5.82□□□□□ -1.48
SMD2YLR275W YDL177CQ12257 170 aa5.82□□□□□ -1.48
SMD2YLR275W INO1P11986 533 aa5.81□□□□□ -1.48
SMD2YLR275W GAS1P22146 559 aaKnown RBP5.81□□□□□ -1.48
SMD2YLR275W RNQ1P25367 405 aa5.81□□□□□ -1.48
SMD2YLR275W NIT1P40447 199 aa5.81□□□□□ -1.48
SMD2YLR275W PRP43P53131 767 aaKnown RBP5.81□□□□□ -1.48
SMD2YLR275W GDE1Q02979 1223 aa5.81□□□□□ -1.48
SMD2YLR275W SPO20Q04359 397 aa5.81□□□□□ -1.48
SMD2YLR275W MOT2P34909 587 aaKnown RBP5.8□□□□□ -1.48
SMD2YLR275W SEC26P41810 973 aaKnown RBP5.8□□□□□ -1.48
SMD2YLR275W ENV11P53246 860 aa5.8□□□□□ -1.48
SMD2YLR275W CWC24P53769 259 aa5.8□□□□□ -1.48
SMD2YLR275W RKM4Q12504 494 aa5.8□□□□□ -1.48
SMD2YLR275W TSA1P34760 196 aaKnown RBP5.79□□□□□ -1.48
SMD2YLR275W MRPL22P53881 309 aa5.79□□□□□ -1.48
SMD2YLR275W CDA2Q06703 312 aa5.79□□□□□ -1.48
SMD2YLR275W RPL11AP0C0W9 174 aaKnown RBP5.78□□□□□ -1.48
SMD2YLR275W BAS1P22035 811 aa5.78□□□□□ -1.48
SMD2YLR275W YKL107WP34251 309 aa5.78□□□□□ -1.48
SMD2YLR275W MXR1P40029 184 aa5.78□□□□□ -1.48
SMD2YLR275W YLR225CQ05948 407 aaKnown RBP5.78□□□□□ -1.48
SMD2YLR275W SPP382Q06411 708 aaPredicted RBP5.78□□□□□ -1.48
SMD2YLR275W YPL066WQ12194 479 aa5.78□□□□□ -1.48
SMD2YLR275W RPL11BQ3E757 174 aaPredicted RBP5.78□□□□□ -1.48
SMD2YLR275W PAM1P37304 830 aaKnown RBP5.77□□□□□ -1.49
SMD2YLR275W YGL176CP46945 554 aa5.77□□□□□ -1.49
SMD2YLR275W SNO2P53823 222 aa5.77□□□□□ -1.49
SMD2YLR275W ACM1Q08981 209 aa5.77□□□□□ -1.49
SMD2YLR275W DBP2P24783 546 aaKnown RBP5.76□□□□□ -1.49
SMD2YLR275W PNT1P38969 423 aa5.76□□□□□ -1.49
SMD2YLR275W SNF7P39929 240 aaKnown RBP5.76□□□□□ -1.49
SMD2YLR275W KRI1P42846 591 aaKnown RBP5.76□□□□□ -1.49
SMD2YLR275W FAL1Q12099 399 aaKnown RBP5.76□□□□□ -1.49
SMD2YLR275W UGA2P38067 497 aa5.75□□□□□ -1.49
SMD2YLR275W RFC5P38251 354 aa5.75□□□□□ -1.49
SMD2YLR275W GEM1P39722 662 aa5.75□□□□□ -1.49
SMD2YLR275W ESC2Q06340 456 aa5.75□□□□□ -1.49
SMD2YLR275W SVS1Q12254 260 aa5.75□□□□□ -1.49
SMD2YLR275W ABD1P32783 436 aaPredicted RBP5.74□□□□□ -1.49
SMD2YLR275W ABZ1P37254 787 aaPredicted RBP5.74□□□□□ -1.49
SMD2YLR275W UBP5P39944 805 aa5.74□□□□□ -1.49
SMD2YLR275W RSM24Q03976 319 aa5.74□□□□□ -1.49
SMD2YLR275W ATG13Q06628 738 aa5.74□□□□□ -1.49
SMD2YLR275W SLA2P33338 968 aa5.73□□□□□ -1.49
SMD2YLR275W PIN4P34217 668 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
SMD2YLR275W VAC8P39968 578 aa5.73□□□□□ -1.49
SMD2YLR275W SIP5P40210 489 aaKnown RBP5.73□□□□□ -1.49
SMD2YLR275W ALD6P54115 500 aaKnown RBP5.73□□□□□ -1.49
SMD2YLR275W CYC1P00044 109 aaPredicted RBP5.72□□□□□ -1.49
SMD2YLR275W BI4P03879 638 aa5.72□□□□□ -1.49
SMD2YLR275W THS1P04801 734 aaKnown RBP5.72□□□□□ -1.49
SMD2YLR275W AGP1P25376 633 aa5.72□□□□□ -1.49
SMD2YLR275W SBA1P28707 216 aaKnown RBP5.72□□□□□ -1.49
SMD2YLR275W AIM3P38266 947 aaKnown RBP5.72□□□□□ -1.49
SMD2YLR275W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SMD2YLR275W OPI10Q08202 246 aa5.72□□□□□ -1.49
SMD2YLR275W YOR352WQ08816 343 aa5.72□□□□□ -1.49
SMD2YLR275W KIN2P13186 1147 aaKnown RBP5.71□□□□□ -1.5
SMD2YLR275W PRP6P19735 899 aaPredicted RBP5.71□□□□□ -1.5
SMD2YLR275W ACE2P21192 770 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms