RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C AOS1Q06624 347 aa7.48□□□□□ -1.21
SED5YLR026C RSC58Q07979 502 aa7.48□□□□□ -1.21
SED5YLR026C DBP5P20449 482 aaKnown RBP7.47□□□□□ -1.21
SED5YLR026C YFL054CP43549 646 aa7.47□□□□□ -1.21
SED5YLR026C CNN1P43618 361 aa7.47□□□□□ -1.21
SED5YLR026C YDL177CQ12257 170 aa7.47□□□□□ -1.21
SED5YLR026C DUT1P33317 147 aa7.46□□□□□ -1.22
SED5YLR026C YER152CP10356 443 aa7.45□□□□□ -1.22
SED5YLR026C RGD1P38339 666 aa7.45□□□□□ -1.22
SED5YLR026C FOL2P51601 243 aaKnown RBP7.45□□□□□ -1.22
SED5YLR026C TIF35Q04067 274 aaKnown RBP7.45□□□□□ -1.22
SED5YLR026C NBA1Q08229 501 aaKnown RBP7.45□□□□□ -1.22
SED5YLR026C SNF5P18480 905 aa7.44□□□□□ -1.22
SED5YLR026C BAP2P38084 609 aa7.44□□□□□ -1.22
SED5YLR026C MCM7P38132 845 aa7.44□□□□□ -1.22
SED5YLR026C CCZ1P38273 704 aa7.44□□□□□ -1.22
SED5YLR026C MPH1P40562 993 aa7.44□□□□□ -1.22
SED5YLR026C CDC34P14682 295 aa7.43□□□□□ -1.22
SED5YLR026C RPN3P40016 523 aaKnown RBP7.43□□□□□ -1.22
SED5YLR026C CDA2Q06703 312 aa7.43□□□□□ -1.22
SED5YLR026C RSB1Q08417 382 aa7.43□□□□□ -1.22
SED5YLR026C TMA46Q12000 345 aaKnown RBP7.43□□□□□ -1.22
SED5YLR026C SPS1P08458 490 aa7.42□□□□□ -1.22
SED5YLR026C PUF4P25339 888 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22 RIP-Chip
SED5YLR026C TSA1P34760 196 aaKnown RBP7.42□□□□□ -1.22
SED5YLR026C PIK1P39104 1066 aa7.42□□□□□ -1.22
SED5YLR026C NIT1P40447 199 aa7.42□□□□□ -1.22
SED5YLR026C PRP43P53131 767 aaKnown RBP7.42□□□□□ -1.22
SED5YLR026C EEB1Q02891 456 aa7.42□□□□□ -1.22
SED5YLR026C MOT2P34909 587 aaKnown RBP7.41□□□□□ -1.22
SED5YLR026C MRPL22P53881 309 aa7.41□□□□□ -1.22
SED5YLR026C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
SED5YLR026C TRP2P00899 507 aaKnown RBP7.4□□□□□ -1.22
SED5YLR026C HNT2P49775 206 aa7.4□□□□□ -1.22
SED5YLR026C LYP1P32487 611 aa7.39□□□□□ -1.23
SED5YLR026C MNR2P35724 969 aa7.39□□□□□ -1.23
SED5YLR026C UBP5P39944 805 aa7.39□□□□□ -1.23
SED5YLR026C MET10P39692 1035 aa7.38□□□□□ -1.23
SED5YLR026C MXR1P40029 184 aa7.38□□□□□ -1.23
SED5YLR026C TYW3P53177 273 aa7.38□□□□□ -1.23
SED5YLR026C INO1P11986 533 aa7.37□□□□□ -1.23
SED5YLR026C ABZ1P37254 787 aaPredicted RBP7.37□□□□□ -1.23
SED5YLR026C AIM3P38266 947 aaKnown RBP7.36□□□□□ -1.23
SED5YLR026C SEC26P41810 973 aaKnown RBP7.36□□□□□ -1.23
SED5YLR026C FAA4P47912 694 aaKnown RBP7.36□□□□□ -1.23
SED5YLR026C GNT1Q12096 491 aa7.36□□□□□ -1.23
SED5YLR026C DBP2P24783 546 aaKnown RBP7.35□□□□□ -1.23
SED5YLR026C JIP5Q06214 492 aaPredicted RBP7.35□□□□□ -1.23
SED5YLR026C YPL066WQ12194 479 aa7.35□□□□□ -1.23
SED5YLR026C RPL11AP0C0W9 174 aaKnown RBP7.34□□□□□ -1.23
SED5YLR026C BAS1P22035 811 aa7.34□□□□□ -1.23
SED5YLR026C SNO2P53823 222 aa7.34□□□□□ -1.23
SED5YLR026C GDE1Q02979 1223 aa7.34□□□□□ -1.23
SED5YLR026C YLR225CQ05948 407 aaKnown RBP7.34□□□□□ -1.23
SED5YLR026C RPL11BQ3E757 174 aaPredicted RBP7.34□□□□□ -1.23
SED5YLR026C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
SED5YLR026C ESC2Q06340 456 aa7.33□□□□□ -1.24
SED5YLR026C MAD1P40957 749 aa7.32□□□□□ -1.24
SED5YLR026C YGL176CP46945 554 aa7.32□□□□□ -1.24
SED5YLR026C YGR053CP53234 283 aa7.32□□□□□ -1.24
SED5YLR026C CWC24P53769 259 aa7.32□□□□□ -1.24
SED5YLR026C SPP382Q06411 708 aaPredicted RBP7.32□□□□□ -1.24
SED5YLR026C SVS1Q12254 260 aa7.32□□□□□ -1.24
SED5YLR026C CYC1P00044 109 aaPredicted RBP7.31□□□□□ -1.24
SED5YLR026C THI80P35202 319 aa7.31□□□□□ -1.24
SED5YLR026C UGA2P38067 497 aa7.31□□□□□ -1.24
SED5YLR026C RFC5P38251 354 aa7.31□□□□□ -1.24
SED5YLR026C CLN2P20438 545 aa7.3□□□□□ -1.24
SED5YLR026C VPS16Q03308 798 aa7.3□□□□□ -1.24
SED5YLR026C SPO20Q04359 397 aa7.3□□□□□ -1.24
SED5YLR026C YPL277CQ08989 487 aa7.3□□□□□ -1.24
SED5YLR026C RKM4Q12504 494 aa7.3□□□□□ -1.24
SED5YLR026C PRP6P19735 899 aaPredicted RBP7.29□□□□□ -1.24
SED5YLR026C YKL107WP34251 309 aa7.29□□□□□ -1.24
SED5YLR026C PNT1P38969 423 aa7.29□□□□□ -1.24
SED5YLR026C ROT1Q03691 256 aa7.29□□□□□ -1.24
SED5YLR026C YOR352WQ08816 343 aa7.29□□□□□ -1.24
SED5YLR026C ACM1Q08981 209 aa7.29□□□□□ -1.24
SED5YLR026C BI4P03879 638 aa7.28□□□□□ -1.24
SED5YLR026C RPS13P05756 151 aaKnown RBP7.28□□□□□ -1.24
SED5YLR026C CMP2P14747 604 aa7.28□□□□□ -1.24
SED5YLR026C ABD1P32783 436 aaPredicted RBP7.28□□□□□ -1.24
SED5YLR026C ENV11P53246 860 aa7.28□□□□□ -1.24
SED5YLR026C RSM24Q03976 319 aa7.28□□□□□ -1.24
SED5YLR026C SGD1Q06132 899 aa7.28□□□□□ -1.24
SED5YLR026C PIN2Q12057 282 aa7.28□□□□□ -1.24
SED5YLR026C RIB2Q12362 591 aaKnown RBP7.28□□□□□ -1.24
SED5YLR026C APL1P27351 700 aa7.27□□□□□ -1.25
SED5YLR026C SLA2P33338 968 aa7.27□□□□□ -1.25
SED5YLR026C TOD6P34219 525 aa7.27□□□□□ -1.25
SED5YLR026C SIP5P40210 489 aaKnown RBP7.27□□□□□ -1.25
SED5YLR026C RIM8P53179 542 aa7.27□□□□□ -1.25
SED5YLR026C SNU71P53207 620 aaKnown RBP7.27□□□□□ -1.25
SED5YLR026C SVF1Q05515 481 aa7.27□□□□□ -1.25
SED5YLR026C SOD2P00447 233 aa7.26□□□□□ -1.25
SED5YLR026C GAL10P04397 699 aa7.26□□□□□ -1.25
SED5YLR026C SRM1P21827 482 aa7.26□□□□□ -1.25
SED5YLR026C LAM1P38851 1228 aa7.26□□□□□ -1.25
SED5YLR026C GEM1P39722 662 aa7.26□□□□□ -1.25
SED5YLR026C PLB2Q03674 706 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms