RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSL1	YLR005W	UBP16	Q02863	499 aa		4.94	□□□□□ -1.62
SSL1	YLR005W	SYF1	Q04048	859 aa	Predicted RBP	4.94	□□□□□ -1.62
SSL1	YLR005W	HAT1	Q12341	374 aa		4.94	□□□□□ -1.62
SSL1	YLR005W	POL5	P39985	1022 aa	Known RBP	4.93	□□□□□ -1.62
SSL1	YLR005W	PEA2	P40091	420 aa		4.93	□□□□□ -1.62
SSL1	YLR005W	NTA1	P40354	457 aa		4.93	□□□□□ -1.62
SSL1	YLR005W	YIL089W	P40500	205 aa		4.93	□□□□□ -1.62
SSL1	YLR005W	FET4	P40988	552 aa		4.93	□□□□□ -1.62
SSL1	YLR005W	SLP1	Q12232	587 aa		4.93	□□□□□ -1.62
SSL1	YLR005W	TFA2	P36145	328 aa		4.92	□□□□□ -1.62
SSL1	YLR005W	GLO3	P38682	493 aa	Known RBP	4.92	□□□□□ -1.62
SSL1	YLR005W	PSY2	P40164	858 aa		4.92	□□□□□ -1.62
SSL1	YLR005W	BIO5	P53744	561 aa	Known RBP	4.92	□□□□□ -1.62
SSL1	YLR005W	YNL050C	P53952	270 aa		4.92	□□□□□ -1.62
SSL1	YLR005W	ALO1	P54783	526 aa	Known RBP	4.92	□□□□□ -1.62
SSL1	YLR005W	UBX2	Q04228	584 aa		4.92	□□□□□ -1.62
SSL1	YLR005W	KAR5	Q04746	504 aa		4.92	□□□□□ -1.62
SSL1	YLR005W	GSC2	P40989	1895 aa		4.92	□□□□□ -1.62
SSL1	YLR005W	SFA1	P32771	386 aa		4.91	□□□□□ -1.62
SSL1	YLR005W	IRS4	P36115	615 aa	Known RBP	4.91	□□□□□ -1.62
SSL1	YLR005W	PAN5	P38787	379 aa		4.91	□□□□□ -1.62
SSL1	YLR005W	ARI1	P53111	347 aa	Known RBP	4.91	□□□□□ -1.62
SSL1	YLR005W	CRF1	Q04930	467 aa		4.91	□□□□□ -1.62
SSL1	YLR005W	CAF20	P12962	161 aa	Known RBP	4.91	□□□□□ -1.62
SSL1	YLR005W	FRD1	P32614	470 aa	Known RBP	4.91	□□□□□ -1.62
SSL1	YLR005W	SMC1	P32908	1225 aa		4.91	□□□□□ -1.62
SSL1	YLR005W	QDR1	P40475	563 aa		4.91	□□□□□ -1.62
SSL1	YLR005W	TY1A-NL1	Q12391	440 aa	Known RBP	4.91	□□□□□ -1.62
SSL1	YLR005W	FUS1	P11710	512 aa		4.9	□□□□□ -1.63
SSL1	YLR005W	MAM1	P40065	302 aa		4.9	□□□□□ -1.63
SSL1	YLR005W	YGR117C	P53270	476 aa		4.9	□□□□□ -1.63
SSL1	YLR005W	DSE4	P53753	1117 aa		4.9	□□□□□ -1.63
SSL1	YLR005W	SOG2	Q08817	791 aa		4.9	□□□□□ -1.63
SSL1	YLR005W	RSC6	P25632	483 aa		4.89	□□□□□ -1.63
SSL1	YLR005W	NAM7	P30771	971 aa	Known RBP	4.89	□□□□□ -1.63
SSL1	YLR005W	PYC2	P32327	1180 aa	Known RBP	4.89	□□□□□ -1.63
SSL1	YLR005W	RRT6	P53117	311 aa	Predicted RBP	4.89	□□□□□ -1.63
SSL1	YLR005W	GUP1	P53154	560 aa		4.89	□□□□□ -1.63
SSL1	YLR005W	TRM44	Q02648	567 aa	Known RBP	4.89	□□□□□ -1.63
SSL1	YLR005W	IOC4	Q04213	475 aa		4.89	□□□□□ -1.63
SSL1	YLR005W	PGM1	P33401	570 aa	Known RBP	4.88	□□□□□ -1.63
SSL1	YLR005W	NEO1	P40527	1151 aa		4.88	□□□□□ -1.63
SSL1	YLR005W	YJR124C	P47159	448 aa		4.88	□□□□□ -1.63
SSL1	YLR005W	ZDS1	P50111	915 aa	Known RBP	4.88	□□□□□ -1.63
SSL1	YLR005W	YNR065C	P53751	1116 aa		4.88	□□□□□ -1.63
SSL1	YLR005W	VPS64	Q03944	604 aa		4.88	□□□□□ -1.63
SSL1	YLR005W	RRG1	Q12167	365 aa	Predicted RBP	4.88	□□□□□ -1.63
SSL1	YLR005W	HVG1	P0CE11	249 aa		4.87	□□□□□ -1.63
SSL1	YLR005W	COQ2	P32378	372 aa		4.87	□□□□□ -1.63
SSL1	YLR005W	MAC1	P35192	417 aa		4.87	□□□□□ -1.63
SSL1	YLR005W	APL2	P36000	726 aa	Predicted RBP	4.87	□□□□□ -1.63
SSL1	YLR005W	AKR1	P39010	764 aa		4.87	□□□□□ -1.63
SSL1	YLR005W	NCS6	P53088	359 aa		4.87	□□□□□ -1.63
SSL1	YLR005W	PKH1	Q03407	766 aa		4.87	□□□□□ -1.63
SSL1	YLR005W	SAC3	P46674	1301 aa		4.86	□□□□□ -1.63
SSL1	YLR005W	HPR1	P17629	752 aa	Known RBP	4.86	□□□□□ -1.63
SSL1	YLR005W	OMA1	P36163	345 aa		4.86	□□□□□ -1.63
SSL1	YLR005W	RTR1	P40084	226 aa	Predicted RBP	4.86	□□□□□ -1.63
SSL1	YLR005W	RRP46	P53256	223 aa	Predicted RBP	4.86	□□□□□ -1.63
SSL1	YLR005W	DNM1	P54861	757 aa		4.86	□□□□□ -1.63
SSL1	YLR005W	SEN54	Q02825	467 aa	Predicted RBP	4.86	□□□□□ -1.63
SSL1	YLR005W	GLO4	Q12320	285 aa		4.86	□□□□□ -1.63
SSL1	YLR005W	PRD1	P25375	712 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	KRE2	P27809	442 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	AFG2	P32794	780 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	LEM3	P42838	414 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	VPS4	P52917	437 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	YOL057W	Q08225	711 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	BMS1	Q08965	1183 aa	Known RBP	4.85	□□□□□ -1.63
SSL1	YLR005W	YLR122C	Q12312	125 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	CSR2	Q12734	1121 aa		4.85	□□□□□ -1.63
SSL1	YLR005W	COQ4	O13525	335 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	TRP3	P00937	484 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	ERS1	P17261	260 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	MAE1	P36013	669 aa	Known RBP	4.84	□□□□□ -1.63
SSL1	YLR005W	KAE1	P36132	386 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	STV1	P37296	890 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	HAS1	Q03532	505 aa	Known RBP	4.84	□□□□□ -1.63
SSL1	YLR005W	SPO71	Q03868	1245 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	ELG1	Q12050	791 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	REC8	Q12188	680 aa		4.84	□□□□□ -1.63
SSL1	YLR005W	APE3	P37302	537 aa	Known RBP	4.83	□□□□□ -1.64
SSL1	YLR005W	SAF1	P38352	637 aa		4.83	□□□□□ -1.64
SSL1	YLR005W	GYP7	P48365	746 aa		4.83	□□□□□ -1.64
SSL1	YLR005W	ATG1	P53104	897 aa		4.83	□□□□□ -1.64
SSL1	YLR005W	ACK1	Q07622	623 aa	Predicted RBP	4.83	□□□□□ -1.64
SSL1	YLR005W	PSF3	Q12146	194 aa		4.83	□□□□□ -1.64
SSL1	YLR005W	SWI1	P09547	1314 aa		4.83	□□□□□ -1.64
SSL1	YLR005W	DUR1,2	P32528	1835 aa	Known RBP	4.83	□□□□□ -1.64
SSL1	YLR005W	TRL1	P09880	827 aa	Known RBP	4.82	□□□□□ -1.64
SSL1	YLR005W	DUR3	P33413	735 aa		4.82	□□□□□ -1.64
SSL1	YLR005W	MOT2	P34909	587 aa	Known RBP	4.82	□□□□□ -1.64
SSL1	YLR005W	YKR073C	P36153	106 aa		4.82	□□□□□ -1.64
SSL1	YLR005W	GRS1	P38088	690 aa	Known RBP	4.82	□□□□□ -1.64
SSL1	YLR005W	YJR008W	P47085	338 aa		4.82	□□□□□ -1.64
SSL1	YLR005W	ACF4	P47129	309 aa		4.82	□□□□□ -1.64
SSL1	YLR005W	INP52	P50942	1183 aa		4.82	□□□□□ -1.64
SSL1	YLR005W	YGR130C	P53278	816 aa		4.82	□□□□□ -1.64
SSL1	YLR005W	ZDS2	P54786	942 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 129.8 ms