RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeast

Gene VPS51, Length 495 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS51	YKR020W	CDA2	Q06703	312 aa		4.62	□□□□□ -1.67
VPS51	YKR020W	NBA1	Q08229	501 aa	Known RBP	4.62	□□□□□ -1.67
VPS51	YKR020W	RTT10	Q08924	1013 aa		4.62	□□□□□ -1.67
VPS51	YKR020W	MLS1	P30952	554 aa		4.61	□□□□□ -1.67
VPS51	YKR020W	CNN1	P43618	361 aa		4.61	□□□□□ -1.67
VPS51	YKR020W	FOL2	P51601	243 aa	Known RBP	4.61	□□□□□ -1.67
VPS51	YKR020W	LPX1	Q12405	387 aa	Known RBP	4.61	□□□□□ -1.67
VPS51	YKR020W	ETP1	P38748	585 aa	Known RBP	4.6	□□□□□ -1.67
VPS51	YKR020W	ENT3	P47160	408 aa		4.6	□□□□□ -1.67
VPS51	YKR020W	YPL260W	Q08977	551 aa		4.6	□□□□□ -1.67
VPS51	YKR020W	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
VPS51	YKR020W	SRO9	P25567	434 aa	Known RBP	4.59	□□□□□ -1.67
VPS51	YKR020W	TSA1	P34760	196 aa	Known RBP	4.59	□□□□□ -1.67
VPS51	YKR020W	RER2	P35196	286 aa		4.59	□□□□□ -1.67
VPS51	YKR020W	TNA1	P53322	534 aa		4.59	□□□□□ -1.67
VPS51	YKR020W	JIP5	Q06214	492 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS51	YKR020W	RCL1	Q08096	367 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS51	YKR020W	RSB1	Q08417	382 aa		4.59	□□□□□ -1.67
VPS51	YKR020W	TMA46	Q12000	345 aa	Known RBP	4.59	□□□□□ -1.67
VPS51	YKR020W	TRP2	P00899	507 aa	Known RBP	4.58	□□□□□ -1.68
VPS51	YKR020W	MOT2	P34909	587 aa	Known RBP	4.58	□□□□□ -1.68
VPS51	YKR020W	THI80	P35202	319 aa		4.58	□□□□□ -1.68
VPS51	YKR020W	RGD1	P38339	666 aa		4.58	□□□□□ -1.68
VPS51	YKR020W	YFL054C	P43549	646 aa		4.58	□□□□□ -1.68
VPS51	YKR020W	HOS3	Q02959	697 aa	Known RBP	4.58	□□□□□ -1.68
VPS51	YKR020W	TIF35	Q04067	274 aa	Known RBP	4.58	□□□□□ -1.68
VPS51	YKR020W	RSC58	Q07979	502 aa		4.58	□□□□□ -1.68
VPS51	YKR020W	SPS1	P08458	490 aa		4.57	□□□□□ -1.68
VPS51	YKR020W	YER152C	P10356	443 aa		4.57	□□□□□ -1.68
VPS51	YKR020W	CDC34	P14682	295 aa		4.57	□□□□□ -1.68
VPS51	YKR020W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
VPS51	YKR020W	MAD1	P40957	749 aa		4.57	□□□□□ -1.68
VPS51	YKR020W	HNT2	P49775	206 aa		4.57	□□□□□ -1.68
VPS51	YKR020W	DUT1	P33317	147 aa		4.56	□□□□□ -1.68
VPS51	YKR020W	MPH1	P40562	993 aa		4.56	□□□□□ -1.68
VPS51	YKR020W	ORC3	P54790	616 aa		4.56	□□□□□ -1.68
VPS51	YKR020W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
VPS51	YKR020W	INO1	P11986	533 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	CLN2	P20438	545 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	LYP1	P32487	611 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	MNR2	P35724	969 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	RPN3	P40016	523 aa	Known RBP	4.55	□□□□□ -1.68
VPS51	YKR020W	SNU71	P53207	620 aa	Known RBP	4.55	□□□□□ -1.68
VPS51	YKR020W	CWC24	P53769	259 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	EEB1	Q02891	456 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	GDE1	Q02979	1223 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	YDL177C	Q12257	170 aa		4.55	□□□□□ -1.68
VPS51	YKR020W	SNF5	P18480	905 aa		4.54	□□□□□ -1.68
VPS51	YKR020W	PIK1	P39104	1066 aa		4.54	□□□□□ -1.68
VPS51	YKR020W	MET10	P39692	1035 aa		4.54	□□□□□ -1.68
VPS51	YKR020W	FAA4	P47912	694 aa	Known RBP	4.54	□□□□□ -1.68
VPS51	YKR020W	TYW3	P53177	273 aa		4.54	□□□□□ -1.68
VPS51	YKR020W	SPO20	Q04359	397 aa		4.54	□□□□□ -1.68
VPS51	YKR020W	BAS1	P22035	811 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	YKL107W	P34251	309 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	BAP2	P38084	609 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	FLR1	P38124	548 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	MXR1	P40029	184 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	MRPL22	P53881	309 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	SPP382	Q06411	708 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS51	YKR020W	YOR352W	Q08816	343 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	GNT1	Q12096	491 aa		4.53	□□□□□ -1.68
VPS51	YKR020W	NAP1	P25293	417 aa	Known RBP	4.52	□□□□□ -1.69
VPS51	YKR020W	ESC2	Q06340	456 aa		4.52	□□□□□ -1.69
VPS51	YKR020W	FAL1	Q12099	399 aa	Known RBP	4.52	□□□□□ -1.69
VPS51	YKR020W	UGA2	P38067	497 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	AIM3	P38266	947 aa	Known RBP	4.51	□□□□□ -1.69
VPS51	YKR020W	SEC26	P41810	973 aa	Known RBP	4.51	□□□□□ -1.69
VPS51	YKR020W	YGL176C	P46945	554 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	SNO2	P53823	222 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
VPS51	YKR020W	VPS16	Q03308	798 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	SVF1	Q05515	481 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	YLR225C	Q05948	407 aa	Known RBP	4.51	□□□□□ -1.69
VPS51	YKR020W	YPL066W	Q12194	479 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	SVS1	Q12254	260 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	RKM4	Q12504	494 aa		4.51	□□□□□ -1.69
VPS51	YKR020W	CYC1	P00044	109 aa	Predicted RBP	4.5	□□□□□ -1.69
VPS51	YKR020W	RPL11A	P0C0W9	174 aa	Known RBP	4.5	□□□□□ -1.69
VPS51	YKR020W	PRI2	P20457	528 aa		4.5	□□□□□ -1.69
VPS51	YKR020W	ABD1	P32783	436 aa	Predicted RBP	4.5	□□□□□ -1.69
VPS51	YKR020W	RFC5	P38251	354 aa		4.5	□□□□□ -1.69
VPS51	YKR020W	PIN2	Q12057	282 aa		4.5	□□□□□ -1.69
VPS51	YKR020W	RPL11B	Q3E757	174 aa	Predicted RBP	4.5	□□□□□ -1.69
VPS51	YKR020W	CMP2	P14747	604 aa		4.49	□□□□□ -1.69
VPS51	YKR020W	PRP6	P19735	899 aa	Predicted RBP	4.49	□□□□□ -1.69
VPS51	YKR020W	ALD6	P54115	500 aa	Known RBP	4.49	□□□□□ -1.69
VPS51	YKR020W	ACM1	Q08981	209 aa		4.49	□□□□□ -1.69
VPS51	YKR020W	DBP2	P24783	546 aa	Known RBP	4.48	□□□□□ -1.69
VPS51	YKR020W	VAC8	P39968	578 aa		4.48	□□□□□ -1.69
VPS51	YKR020W	YGR053C	P53234	283 aa		4.48	□□□□□ -1.69
VPS51	YKR020W	RSM24	Q03976	319 aa		4.48	□□□□□ -1.69
VPS51	YKR020W	BI4	P03879	638 aa		4.47	□□□□□ -1.69
VPS51	YKR020W	APL1	P27351	700 aa		4.47	□□□□□ -1.69
VPS51	YKR020W	ENV11	P53246	860 aa		4.47	□□□□□ -1.69
VPS51	YKR020W	ROT1	Q03691	256 aa		4.47	□□□□□ -1.69
VPS51	YKR020W	RPS13	P05756	151 aa	Known RBP	4.46	□□□□□ -1.7
VPS51	YKR020W	KIN2	P13186	1147 aa	Known RBP	4.46	□□□□□ -1.7
VPS51	YKR020W	SLA2	P33338	968 aa		4.46	□□□□□ -1.7
VPS51	YKR020W	TOD6	P34219	525 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms