RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	RIP-Chip
EBP2	YKL172W	YSC84	P32793	468 aa		6.22	□□□□□ -1.41
EBP2	YKL172W	MRP8	P35719	219 aa		6.22	□□□□□ -1.41
EBP2	YKL172W	CCZ1	P38273	704 aa		6.22	□□□□□ -1.41
EBP2	YKL172W	YHL012W	P38709	493 aa		6.22	□□□□□ -1.41
EBP2	YKL172W	SPF1	P39986	1215 aa	Known RBP	6.22	□□□□□ -1.41
EBP2	YKL172W	YLR225C	Q05948	407 aa	Known RBP	6.22	□□□□□ -1.41
EBP2	YKL172W	SRO9	P25567	434 aa	Known RBP	6.21	□□□□□ -1.42
EBP2	YKL172W	SCT1	P32784	759 aa		6.21	□□□□□ -1.42
EBP2	YKL172W	MOT2	P34909	587 aa	Known RBP	6.21	□□□□□ -1.42
EBP2	YKL172W	SEA4	P38164	1038 aa		6.21	□□□□□ -1.42
EBP2	YKL172W	TNA1	P53322	534 aa		6.21	□□□□□ -1.42
EBP2	YKL172W	HOS3	Q02959	697 aa	Known RBP	6.21	□□□□□ -1.42
EBP2	YKL172W	EAR1	Q03212	550 aa		6.21	□□□□□ -1.42
EBP2	YKL172W	ABD1	P32783	436 aa	Predicted RBP	6.2	□□□□□ -1.42
EBP2	YKL172W	MDL2	P33311	773 aa		6.2	□□□□□ -1.42
EBP2	YKL172W	NMD3	P38861	518 aa	Known RBP	6.2	□□□□□ -1.42
EBP2	YKL172W	GPB2	P39717	880 aa		6.2	□□□□□ -1.42
EBP2	YKL172W	OYE3	P41816	400 aa	Predicted RBP	6.2	□□□□□ -1.42
EBP2	YKL172W	YGL176C	P46945	554 aa		6.2	□□□□□ -1.42
EBP2	YKL172W	YGR130C	P53278	816 aa		6.2	□□□□□ -1.42
EBP2	YKL172W	NAN1	Q02931	896 aa	Known RBP	6.2	□□□□□ -1.42
EBP2	YKL172W	SPP382	Q06411	708 aa	Predicted RBP	6.2	□□□□□ -1.42
EBP2	YKL172W	NBA1	Q08229	501 aa	Known RBP	6.2	□□□□□ -1.42
EBP2	YKL172W	MED7	Q08278	222 aa		6.2	□□□□□ -1.42
EBP2	YKL172W	GRX1	P25373	110 aa	Known RBP	6.19	□□□□□ -1.42
EBP2	YKL172W	YKL069W	P36088	180 aa		6.19	□□□□□ -1.42
EBP2	YKL172W	OCA5	P38738	679 aa		6.19	□□□□□ -1.42
EBP2	YKL172W	TRE1	Q08919	783 aa		6.19	□□□□□ -1.42
EBP2	YKL172W	CYC7	P00045	113 aa		6.18	□□□□□ -1.42
EBP2	YKL172W	YER152C	P10356	443 aa		6.18	□□□□□ -1.42
EBP2	YKL172W	BAP2	P38084	609 aa		6.18	□□□□□ -1.42
EBP2	YKL172W	IRR1	P40541	1150 aa		6.18	□□□□□ -1.42
EBP2	YKL172W	YPL066W	Q12194	479 aa		6.18	□□□□□ -1.42
EBP2	YKL172W	SBP1	P10080	294 aa	Known RBP	6.17	□□□□□ -1.42
EBP2	YKL172W	SAM35	P14693	329 aa		6.17	□□□□□ -1.42
EBP2	YKL172W	VBA5	P36172	582 aa		6.17	□□□□□ -1.42
EBP2	YKL172W	PBY1	P38254	753 aa		6.17	□□□□□ -1.42
EBP2	YKL172W	PIK1	P39104	1066 aa		6.17	□□□□□ -1.42
EBP2	YKL172W	ESC2	Q06340	456 aa		6.17	□□□□□ -1.42
EBP2	YKL172W	THS1	P04801	734 aa	Known RBP	6.16	□□□□□ -1.42
EBP2	YKL172W	PRP9	P19736	530 aa	Known RBP	6.16	□□□□□ -1.42
EBP2	YKL172W	SPO75	Q07798	868 aa		6.16	□□□□□ -1.42
EBP2	YKL172W	YOL098C	Q12496	1037 aa		6.16	□□□□□ -1.42
EBP2	YKL172W	RPL11A	P0C0W9	174 aa	Known RBP	6.15	□□□□□ -1.42
EBP2	YKL172W	SNF5	P18480	905 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	ADP1	P25371	1049 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	TOS1	P38288	455 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	PNT1	P38969	423 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	PEX7	P39108	375 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	GEM1	P39722	662 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	TPO2	P53283	614 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	ACM1	Q08981	209 aa		6.15	□□□□□ -1.42
EBP2	YKL172W	RPL11B	Q3E757	174 aa	Predicted RBP	6.15	□□□□□ -1.42
EBP2	YKL172W	TRP3	P00937	484 aa		6.14	□□□□□ -1.43
EBP2	YKL172W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.14	□□□□□ -1.43	not detected
EBP2	YKL172W	PRO1	P32264	428 aa		6.14	□□□□□ -1.43
EBP2	YKL172W	TAT2	P38967	592 aa		6.14	□□□□□ -1.43
EBP2	YKL172W	SIP5	P40210	489 aa	Known RBP	6.14	□□□□□ -1.43
EBP2	YKL172W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.14	□□□□□ -1.43	not detected
EBP2	YKL172W	RSC58	Q07979	502 aa		6.14	□□□□□ -1.43
EBP2	YKL172W	YTA7	P40340	1379 aa		6.14	□□□□□ -1.43
EBP2	YKL172W	RAD4	P14736	754 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	YKR073C	P36153	106 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	YBR184W	P38299	523 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	PTC7	P38797	343 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	NSE3	Q05541	303 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	RSB1	Q08417	382 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	OSH2	Q12451	1283 aa		6.13	□□□□□ -1.43
EBP2	YKL172W	GCD1	P09032	578 aa	Predicted RBP	6.12	□□□□□ -1.43
EBP2	YKL172W	ERP6	P53198	216 aa		6.12	□□□□□ -1.43
EBP2	YKL172W	ENV11	P53246	860 aa		6.12	□□□□□ -1.43
EBP2	YKL172W	FPR4	Q06205	392 aa	Predicted RBP	6.12	□□□□□ -1.43
EBP2	YKL172W	SRP40	P32583	406 aa	Predicted RBP	6.11	□□□□□ -1.43
EBP2	YKL172W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
EBP2	YKL172W	STE5	P32917	917 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	UGA2	P38067	497 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	MBP1	P39678	833 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	MXR1	P40029	184 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	GTS1	P40956	396 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	TIM54	P47045	478 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	FOL2	P51601	243 aa	Known RBP	6.11	□□□□□ -1.43
EBP2	YKL172W	SSY1	Q03770	852 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	BDF2	Q07442	638 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	RCL1	Q08096	367 aa	Predicted RBP	6.11	□□□□□ -1.43
EBP2	YKL172W	CDC53	Q12018	815 aa	Known RBP	6.11	□□□□□ -1.43
EBP2	YKL172W	YOR131C	Q12486	218 aa		6.11	□□□□□ -1.43
EBP2	YKL172W	AIM26	P32858	118 aa		6.1	□□□□□ -1.43
EBP2	YKL172W	SLA2	P33338	968 aa		6.1	□□□□□ -1.43
EBP2	YKL172W	SRP1	Q02821	542 aa	Known RBP	6.1	□□□□□ -1.43
EBP2	YKL172W	SPS1	P08458	490 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	DBP2	P24783	546 aa	Known RBP	6.09	□□□□□ -1.43
EBP2	YKL172W	LIP5	P32875	414 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	OMA1	P36163	345 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	RRT14	P40470	206 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	IOC3	P43596	787 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	ALO1	P54783	526 aa	Known RBP	6.09	□□□□□ -1.43
EBP2	YKL172W	ORC3	P54790	616 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	SDH1	Q00711	640 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	ATG13	Q06628	738 aa		6.09	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms