RNA–Protein interactions for RNA: YKL170W

MRPL38, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL38, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL38	YKL170W	RAD27	P26793	382 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	RER2	P35196	286 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	UBP5	P39944	805 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	NIT1	P40447	199 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	YFL054C	P43549	646 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	ORC3	P54790	616 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	RSC58	Q07979	502 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	RTT10	Q08924	1013 aa		4.19	□□□□□ -1.74
MRPL38	YKL170W	SRO9	P25567	434 aa	Known RBP	4.18	□□□□□ -1.74
MRPL38	YKL170W	PET112	P33893	541 aa		4.18	□□□□□ -1.74
MRPL38	YKL170W	FOL2	P51601	243 aa	Known RBP	4.18	□□□□□ -1.74
MRPL38	YKL170W	TNA1	P53322	534 aa		4.18	□□□□□ -1.74
MRPL38	YKL170W	RMD1	Q03441	430 aa		4.18	□□□□□ -1.74
MRPL38	YKL170W	NBA1	Q08229	501 aa	Known RBP	4.18	□□□□□ -1.74
MRPL38	YKL170W	RSB1	Q08417	382 aa		4.18	□□□□□ -1.74
MRPL38	YKL170W	YPL260W	Q08977	551 aa		4.18	□□□□□ -1.74
MRPL38	YKL170W	YDL177C	Q12257	170 aa		4.18	□□□□□ -1.74
MRPL38	YKL170W	SPS1	P08458	490 aa		4.17	□□□□□ -1.74
MRPL38	YKL170W	YER152C	P10356	443 aa		4.17	□□□□□ -1.74
MRPL38	YKL170W	DBP5	P20449	482 aa	Known RBP	4.17	□□□□□ -1.74
MRPL38	YKL170W	MCM7	P38132	845 aa		4.17	□□□□□ -1.74
MRPL38	YKL170W	CCZ1	P38273	704 aa		4.17	□□□□□ -1.74
MRPL38	YKL170W	CNN1	P43618	361 aa		4.17	□□□□□ -1.74
MRPL38	YKL170W	ENT3	P47160	408 aa		4.17	□□□□□ -1.74
MRPL38	YKL170W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
MRPL38	YKL170W	DUT1	P33317	147 aa		4.16	□□□□□ -1.74
MRPL38	YKL170W	RGD1	P38339	666 aa		4.16	□□□□□ -1.74
MRPL38	YKL170W	MET10	P39692	1035 aa		4.16	□□□□□ -1.74
MRPL38	YKL170W	MRPL22	P53881	309 aa		4.16	□□□□□ -1.74
MRPL38	YKL170W	TIF35	Q04067	274 aa	Known RBP	4.16	□□□□□ -1.74
MRPL38	YKL170W	SNF5	P18480	905 aa		4.15	□□□□□ -1.75
MRPL38	YKL170W	MOT2	P34909	587 aa	Known RBP	4.15	□□□□□ -1.75
MRPL38	YKL170W	BAP2	P38084	609 aa		4.15	□□□□□ -1.75
MRPL38	YKL170W	MPH1	P40562	993 aa		4.15	□□□□□ -1.75
MRPL38	YKL170W	CDA2	Q06703	312 aa		4.15	□□□□□ -1.75
MRPL38	YKL170W	TMA46	Q12000	345 aa	Known RBP	4.15	□□□□□ -1.75
MRPL38	YKL170W	TRP2	P00899	507 aa	Known RBP	4.14	□□□□□ -1.75
MRPL38	YKL170W	CDC34	P14682	295 aa		4.14	□□□□□ -1.75
MRPL38	YKL170W	TSA1	P34760	196 aa	Known RBP	4.14	□□□□□ -1.75
MRPL38	YKL170W	PIK1	P39104	1066 aa		4.14	□□□□□ -1.75
MRPL38	YKL170W	RPN3	P40016	523 aa	Known RBP	4.14	□□□□□ -1.75
MRPL38	YKL170W	EEB1	Q02891	456 aa		4.14	□□□□□ -1.75
MRPL38	YKL170W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
MRPL38	YKL170W	AIM3	P38266	947 aa	Known RBP	4.13	□□□□□ -1.75
MRPL38	YKL170W	MXR1	P40029	184 aa		4.13	□□□□□ -1.75
MRPL38	YKL170W	TYW3	P53177	273 aa		4.13	□□□□□ -1.75
MRPL38	YKL170W	INO1	P11986	533 aa		4.12	□□□□□ -1.75
MRPL38	YKL170W	LYP1	P32487	611 aa		4.12	□□□□□ -1.75
MRPL38	YKL170W	ABZ1	P37254	787 aa	Predicted RBP	4.12	□□□□□ -1.75
MRPL38	YKL170W	SEC26	P41810	973 aa	Known RBP	4.12	□□□□□ -1.75
MRPL38	YKL170W	HNT2	P49775	206 aa		4.12	□□□□□ -1.75
MRPL38	YKL170W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
MRPL38	YKL170W	YLR225C	Q05948	407 aa	Known RBP	4.12	□□□□□ -1.75
MRPL38	YKL170W	JIP5	Q06214	492 aa	Predicted RBP	4.12	□□□□□ -1.75
MRPL38	YKL170W	CYC1	P00044	109 aa	Predicted RBP	4.11	□□□□□ -1.75
MRPL38	YKL170W	BAS1	P22035	811 aa		4.11	□□□□□ -1.75
MRPL38	YKL170W	DBP2	P24783	546 aa	Known RBP	4.11	□□□□□ -1.75
MRPL38	YKL170W	MNR2	P35724	969 aa		4.11	□□□□□ -1.75
MRPL38	YKL170W	YKL222C	P35995	705 aa		4.11	□□□□□ -1.75
MRPL38	YKL170W	PAM1	P37304	830 aa	Known RBP	4.11	□□□□□ -1.75
MRPL38	YKL170W	FAA4	P47912	694 aa	Known RBP	4.11	□□□□□ -1.75
MRPL38	YKL170W	SNO2	P53823	222 aa		4.11	□□□□□ -1.75
MRPL38	YKL170W	GDE1	Q02979	1223 aa		4.11	□□□□□ -1.75
MRPL38	YKL170W	RPL11A	P0C0W9	174 aa	Known RBP	4.1	□□□□□ -1.75
MRPL38	YKL170W	RFC5	P38251	354 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	MAD1	P40957	749 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	YGL176C	P46945	554 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	CWC24	P53769	259 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	ROT1	Q03691	256 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	ESC2	Q06340	456 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	SPP382	Q06411	708 aa	Predicted RBP	4.1	□□□□□ -1.75
MRPL38	YKL170W	YOR352W	Q08816	343 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	GNT1	Q12096	491 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	YPL066W	Q12194	479 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	SVS1	Q12254	260 aa		4.1	□□□□□ -1.75
MRPL38	YKL170W	RPL11B	Q3E757	174 aa	Predicted RBP	4.1	□□□□□ -1.75
MRPL38	YKL170W	CMP2	P14747	604 aa		4.09	□□□□□ -1.75
MRPL38	YKL170W	THI80	P35202	319 aa		4.09	□□□□□ -1.75
MRPL38	YKL170W	UGA2	P38067	497 aa		4.09	□□□□□ -1.75
MRPL38	YKL170W	YPL277C	Q08989	487 aa		4.09	□□□□□ -1.75
MRPL38	YKL170W	YTA7	P40340	1379 aa		4.09	□□□□□ -1.75
MRPL38	YKL170W	RPS13	P05756	151 aa	Known RBP	4.08	□□□□□ -1.76
MRPL38	YKL170W	PRP6	P19735	899 aa	Predicted RBP	4.08	□□□□□ -1.76
MRPL38	YKL170W	APL1	P27351	700 aa		4.08	□□□□□ -1.76
MRPL38	YKL170W	ABD1	P32783	436 aa	Predicted RBP	4.08	□□□□□ -1.76
MRPL38	YKL170W	TOD6	P34219	525 aa		4.08	□□□□□ -1.76
MRPL38	YKL170W	YGR053C	P53234	283 aa		4.08	□□□□□ -1.76
MRPL38	YKL170W	RSM24	Q03976	319 aa		4.08	□□□□□ -1.76
MRPL38	YKL170W	SPO20	Q04359	397 aa		4.08	□□□□□ -1.76
MRPL38	YKL170W	SGD1	Q06132	899 aa		4.08	□□□□□ -1.76
MRPL38	YKL170W	BI4	P03879	638 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	CLN2	P20438	545 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	YKL107W	P34251	309 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	RIM8	P53179	542 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	VPS16	Q03308	798 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	PLB2	Q03674	706 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
MRPL38	YKL170W	ACM1	Q08981	209 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	RKM4	Q12504	494 aa		4.07	□□□□□ -1.76
MRPL38	YKL170W	GAL10	P04397	699 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms