RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C PPX1P38698 397 aa3.79□□□□□ -1.8
SHE2YKL130C RSM24Q03976 319 aa3.79□□□□□ -1.8
SHE2YKL130C RPT1P33299 467 aaKnown RBP3.78□□□□□ -1.8
SHE2YKL130C MSC6Q08818 692 aaKnown RBP3.78□□□□□ -1.8
SHE2YKL130C YPL260WQ08977 551 aa3.78□□□□□ -1.8
SHE2YKL130C TAD3Q9URQ3 322 aa3.78□□□□□ -1.8
SHE2YKL130C CMP2P14747 604 aa3.77□□□□□ -1.81
SHE2YKL130C RFC5P38251 354 aa3.77□□□□□ -1.81
SHE2YKL130C SSF1P38789 453 aaPredicted RBP3.77□□□□□ -1.81
SHE2YKL130C STM1P39015 273 aaKnown RBP3.77□□□□□ -1.81
SHE2YKL130C RPN3P40016 523 aaKnown RBP3.77□□□□□ -1.81
SHE2YKL130C PIC2P40035 300 aa3.77□□□□□ -1.81
SHE2YKL130C PLB2Q03674 706 aa3.77□□□□□ -1.81
SHE2YKL130C GAL10P04397 699 aa3.76□□□□□ -1.81
SHE2YKL130C HXK1P04806 485 aaKnown RBP3.76□□□□□ -1.81
SHE2YKL130C SNF5P18480 905 aa3.76□□□□□ -1.81
SHE2YKL130C TRM2P33753 639 aa3.76□□□□□ -1.81
SHE2YKL130C DUS4Q06063 367 aa3.76□□□□□ -1.81
SHE2YKL130C RXT3Q07458 294 aa3.76□□□□□ -1.81
SHE2YKL130C WHI5Q12416 295 aa3.76□□□□□ -1.81
SHE2YKL130C DOM34P33309 386 aa3.75□□□□□ -1.81
SHE2YKL130C RAT1Q02792 1006 aaKnown RBP3.75□□□□□ -1.81
SHE2YKL130C ROD1Q02805 837 aa3.75□□□□□ -1.81
SHE2YKL130C TMA10Q06177 86 aa3.75□□□□□ -1.81
SHE2YKL130C TAF13P11747 167 aa3.74□□□□□ -1.81
SHE2YKL130C PRE9P23638 258 aaKnown RBP3.74□□□□□ -1.81
SHE2YKL130C MRPS18P42847 217 aa3.74□□□□□ -1.81
SHE2YKL130C YFL054CP43549 646 aa3.74□□□□□ -1.81
SHE2YKL130C MCM6P53091 1017 aaKnown RBP3.74□□□□□ -1.81
SHE2YKL130C ACK1Q07622 623 aaPredicted RBP3.74□□□□□ -1.81
SHE2YKL130C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
SHE2YKL130C GPB1Q08886 897 aa3.74□□□□□ -1.81
SHE2YKL130C PUS9Q12069 462 aa3.74□□□□□ -1.81
SHE2YKL130C SVS1Q12254 260 aa3.74□□□□□ -1.81
SHE2YKL130C KIN2P13186 1147 aaKnown RBP3.73□□□□□ -1.81
SHE2YKL130C SRM1P21827 482 aa3.73□□□□□ -1.81
SHE2YKL130C HCM1P25364 564 aa3.73□□□□□ -1.81
SHE2YKL130C CDC20P26309 610 aa3.73□□□□□ -1.81
SHE2YKL130C APL1P27351 700 aa3.73□□□□□ -1.81
SHE2YKL130C MSE1P48525 536 aa3.73□□□□□ -1.81
SHE2YKL130C PBP1P53297 722 aaKnown RBP3.73□□□□□ -1.81
SHE2YKL130C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
SHE2YKL130C MCD1Q12158 566 aa3.73□□□□□ -1.81
SHE2YKL130C MKK2P32491 506 aa3.72□□□□□ -1.81
SHE2YKL130C LST4P34239 828 aa3.72□□□□□ -1.81
SHE2YKL130C MNN10P50108 393 aaKnown RBP3.72□□□□□ -1.81
SHE2YKL130C GTF1P53260 183 aaPredicted RBP3.72□□□□□ -1.81
SHE2YKL130C YER152CP10356 443 aa3.71□□□□□ -1.82
SHE2YKL130C SEC20P28791 383 aa3.71□□□□□ -1.82
SHE2YKL130C MLS1P30952 554 aa3.71□□□□□ -1.82
SHE2YKL130C SEC8P32855 1065 aa3.71□□□□□ -1.82
SHE2YKL130C RGD1P38339 666 aa3.71□□□□□ -1.82
SHE2YKL130C SIW14P53965 281 aa3.71□□□□□ -1.82
SHE2YKL130C RIB2Q12362 591 aaKnown RBP3.71□□□□□ -1.82
SHE2YKL130C STE11P23561 717 aa3.7□□□□□ -1.82
SHE2YKL130C SYP1P25623 870 aaKnown RBP3.7□□□□□ -1.82
SHE2YKL130C YGR122WP53272 402 aa3.7□□□□□ -1.82
SHE2YKL130C SUN4P53616 420 aa3.7□□□□□ -1.82
SHE2YKL130C YAP6Q03935 383 aa3.7□□□□□ -1.82
SHE2YKL130C MRL1Q06815 381 aa3.7□□□□□ -1.82
SHE2YKL130C YPT53P36019 220 aa3.69□□□□□ -1.82
SHE2YKL130C IPL1P38991 367 aa3.69□□□□□ -1.82
SHE2YKL130C AIM21P40563 679 aa3.69□□□□□ -1.82
SHE2YKL130C ENT3P47160 408 aa3.69□□□□□ -1.82
SHE2YKL130C GCV2P49095 1034 aa3.69□□□□□ -1.82
SHE2YKL130C SLI1P53304 468 aa3.69□□□□□ -1.82
SHE2YKL130C NTO1Q12311 748 aa3.69□□□□□ -1.82
SHE2YKL130C RAD2P07276 1031 aa3.68□□□□□ -1.82
SHE2YKL130C CDC6P09119 513 aa3.68□□□□□ -1.82
SHE2YKL130C CNN1P43618 361 aa3.68□□□□□ -1.82
SHE2YKL130C YLR224WQ05947 369 aa3.68□□□□□ -1.82
SHE2YKL130C URN1Q06525 465 aaKnown RBP3.68□□□□□ -1.82
SHE2YKL130C DBP5P20449 482 aaKnown RBP3.67□□□□□ -1.82
SHE2YKL130C BAS1P22035 811 aa3.67□□□□□ -1.82
SHE2YKL130C EMC1P25574 760 aa3.67□□□□□ -1.82
SHE2YKL130C PMI40P29952 429 aaKnown RBP3.67□□□□□ -1.82
SHE2YKL130C HXT13P39924 564 aa3.67□□□□□ -1.82
SHE2YKL130C RPS26AP39938 119 aaKnown RBP3.67□□□□□ -1.82
SHE2YKL130C RPS26BP39939 119 aaKnown RBP3.67□□□□□ -1.82
SHE2YKL130C PHO23P50947 330 aa3.67□□□□□ -1.82
SHE2YKL130C VPS62P53285 467 aa3.67□□□□□ -1.82
SHE2YKL130C HXT17P53631 564 aa3.67□□□□□ -1.82
SHE2YKL130C HXT15P54854 567 aa3.67□□□□□ -1.82
SHE2YKL130C MCM7P38132 845 aa3.66□□□□□ -1.82
SHE2YKL130C SIZ1Q04195 904 aa3.66□□□□□ -1.82
SHE2YKL130C HMI1Q12039 706 aa3.66□□□□□ -1.82
SHE2YKL130C GCR1P07261 785 aa3.65□□□□□ -1.83
SHE2YKL130C CYC8P14922 966 aa3.65□□□□□ -1.83
SHE2YKL130C UGA2P38067 497 aa3.65□□□□□ -1.83
SHE2YKL130C CTF4Q01454 927 aa3.65□□□□□ -1.83
SHE2YKL130C MSC2Q03455 724 aa3.65□□□□□ -1.83
SHE2YKL130C ATG13Q06628 738 aa3.65□□□□□ -1.83
SHE2YKL130C PMA1P05030 918 aaKnown RBP3.64□□□□□ -1.83
SHE2YKL130C ACE2P21192 770 aa3.64□□□□□ -1.83
SHE2YKL130C PEP7P32609 515 aa3.64□□□□□ -1.83
SHE2YKL130C PLB1P39105 664 aa3.64□□□□□ -1.83
SHE2YKL130C MXR1P40029 184 aa3.64□□□□□ -1.83
SHE2YKL130C MPH1P40562 993 aa3.64□□□□□ -1.83
SHE2YKL130C GNP1P48813 663 aa3.64□□□□□ -1.83
SHE2YKL130C NOP12Q08208 459 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 127.3 ms