RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeast

Gene SRP21, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP21	YKL122C	KIP1	P28742	1111 aa		5.2	□□□□□ -1.58
SRP21	YKL122C	SQT1	P35184	431 aa		5.2	□□□□□ -1.58
SRP21	YKL122C	RDH54	P38086	958 aa		5.2	□□□□□ -1.58
SRP21	YKL122C	RSM24	Q03976	319 aa		5.2	□□□□□ -1.58
SRP21	YKL122C	MSC6	Q08818	692 aa	Known RBP	5.2	□□□□□ -1.58
SRP21	YKL122C	WHI5	Q12416	295 aa		5.2	□□□□□ -1.58
SRP21	YKL122C	GAL10	P04397	699 aa		5.19	□□□□□ -1.58
SRP21	YKL122C	SEC20	P28791	383 aa		5.19	□□□□□ -1.58
SRP21	YKL122C	IPL1	P38991	367 aa		5.19	□□□□□ -1.58
SRP21	YKL122C	PBP1	P53297	722 aa	Known RBP	5.19	□□□□□ -1.58
SRP21	YKL122C	GPB1	Q08886	897 aa		5.19	□□□□□ -1.58
SRP21	YKL122C	CDC6	P09119	513 aa		5.18	□□□□□ -1.58
SRP21	YKL122C	KAR2	P16474	682 aa	Known RBP	5.18	□□□□□ -1.58
SRP21	YKL122C	SNF5	P18480	905 aa		5.18	□□□□□ -1.58
SRP21	YKL122C	PRP40	P33203	583 aa	Known RBP	5.18	□□□□□ -1.58
SRP21	YKL122C	PEX28	P38848	579 aa		5.18	□□□□□ -1.58
SRP21	YKL122C	SLD2	P34252	453 aa		5.17	□□□□□ -1.58
SRP21	YKL122C	RPN3	P40016	523 aa	Known RBP	5.17	□□□□□ -1.58
SRP21	YKL122C	THI12	P42883	340 aa		5.17	□□□□□ -1.58
SRP21	YKL122C	THI5	P43534	340 aa		5.17	□□□□□ -1.58
SRP21	YKL122C	THI11	P47183	340 aa		5.17	□□□□□ -1.58
SRP21	YKL122C	THI13	Q07748	340 aa		5.17	□□□□□ -1.58
SRP21	YKL122C	SPO21	Q12411	609 aa		5.17	□□□□□ -1.58
SRP21	YKL122C	CMP2	P14747	604 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	SRM1	P21827	482 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	MET4	P32389	672 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	RFC5	P38251	354 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	GPB2	P39717	880 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	PHO23	P50947	330 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	ULP1	Q02724	621 aa		5.16	□□□□□ -1.58
SRP21	YKL122C	PMA1	P05030	918 aa	Known RBP	5.15	□□□□□ -1.59
SRP21	YKL122C	AFG2	P32794	780 aa		5.15	□□□□□ -1.59
SRP21	YKL122C	UGA4	P32837	571 aa		5.15	□□□□□ -1.59
SRP21	YKL122C	VPS62	P53285	467 aa		5.15	□□□□□ -1.59
SRP21	YKL122C	PTC5	Q12511	572 aa		5.15	□□□□□ -1.59
SRP21	YKL122C	PHO4	P07270	312 aa	Known RBP	5.14	□□□□□ -1.59
SRP21	YKL122C	YGL140C	P53120	1219 aa		5.14	□□□□□ -1.59
SRP21	YKL122C	DCG1	P32460	244 aa		5.13	□□□□□ -1.59
SRP21	YKL122C	GCD6	P32501	712 aa	Known RBP	5.13	□□□□□ -1.59
SRP21	YKL122C	DEF1	P35732	738 aa	Known RBP	5.13	□□□□□ -1.59
SRP21	YKL122C	EST2	Q06163	884 aa		5.13	□□□□□ -1.59
SRP21	YKL122C	HEM13	P11353	328 aa	Known RBP	5.12	□□□□□ -1.59
SRP21	YKL122C	KIN4	Q01919	800 aa		5.12	□□□□□ -1.59
SRP21	YKL122C	YAP6	Q03935	383 aa		5.12	□□□□□ -1.59
SRP21	YKL122C	YLR224W	Q05947	369 aa		5.12	□□□□□ -1.59
SRP21	YKL122C	YPL260W	Q08977	551 aa		5.12	□□□□□ -1.59
SRP21	YKL122C	KIN2	P13186	1147 aa	Known RBP	5.11	□□□□□ -1.59
SRP21	YKL122C	RIB2	Q12362	591 aa	Known RBP	5.11	□□□□□ -1.59
SRP21	YKL122C	SEC23	P15303	768 aa	Known RBP	5.1	□□□□□ -1.59
SRP21	YKL122C	VPS35	P34110	944 aa		5.1	□□□□□ -1.59
SRP21	YKL122C	ALG3	P38179	458 aa		5.1	□□□□□ -1.59
SRP21	YKL122C	MSS4	P38994	779 aa		5.1	□□□□□ -1.59
SRP21	YKL122C	DAK2	P43550	591 aa		5.1	□□□□□ -1.59
SRP21	YKL122C	SIZ1	Q04195	904 aa		5.1	□□□□□ -1.59
SRP21	YKL122C	DAL4	Q04895	635 aa		5.1	□□□□□ -1.59
SRP21	YKL122C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
SRP21	YKL122C	HMI1	Q12039	706 aa		5.09	□□□□□ -1.59
SRP21	YKL122C	RPT1	P33299	467 aa	Known RBP	5.08	□□□□□ -1.6
SRP21	YKL122C	POL32	P47110	350 aa		5.08	□□□□□ -1.6
SRP21	YKL122C	ADI1	Q03677	179 aa		5.08	□□□□□ -1.6
SRP21	YKL122C	NOP12	Q08208	459 aa	Known RBP	5.08	□□□□□ -1.6
SRP21	YKL122C	PPM2	Q08282	695 aa		5.08	□□□□□ -1.6
SRP21	YKL122C	EMC1	P25574	760 aa		5.07	□□□□□ -1.6
SRP21	YKL122C	TOS4	Q06266	489 aa		5.07	□□□□□ -1.6
SRP21	YKL122C	SVS1	Q12254	260 aa		5.07	□□□□□ -1.6
SRP21	YKL122C	ATE1	P16639	503 aa		5.06	□□□□□ -1.6
SRP21	YKL122C	HEM3	P28789	327 aa		5.06	□□□□□ -1.6
SRP21	YKL122C	OAR1	P35731	278 aa		5.06	□□□□□ -1.6
SRP21	YKL122C	GTF1	P53260	183 aa	Predicted RBP	5.06	□□□□□ -1.6
SRP21	YKL122C	YPL109C	Q02981	657 aa		5.06	□□□□□ -1.6
SRP21	YKL122C	RRP15	Q06511	250 aa	Predicted RBP	5.06	□□□□□ -1.6
SRP21	YKL122C	OXR1	Q08952	273 aa		5.06	□□□□□ -1.6
SRP21	YKL122C	TAF13	P11747	167 aa		5.05	□□□□□ -1.6
SRP21	YKL122C	APL1	P27351	700 aa		5.05	□□□□□ -1.6
SRP21	YKL122C	MOH1	P38191	138 aa		5.04	□□□□□ -1.6
SRP21	YKL122C	FAA3	P39002	694 aa		5.04	□□□□□ -1.6
SRP21	YKL122C	IOC3	P43596	787 aa		5.04	□□□□□ -1.6
SRP21	YKL122C	DED1	P06634	604 aa	Known RBP	5.03	□□□□□ -1.6
SRP21	YKL122C	ASF1	P32447	279 aa		5.03	□□□□□ -1.6
SRP21	YKL122C	MGE1	P38523	228 aa		5.03	□□□□□ -1.6
SRP21	YKL122C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SRP21	YKL122C	ATG13	Q06628	738 aa		5.03	□□□□□ -1.6
SRP21	YKL122C	HXK1	P04806	485 aa	Known RBP	5.02	□□□□□ -1.61
SRP21	YKL122C	YFL054C	P43549	646 aa		5.02	□□□□□ -1.61
SRP21	YKL122C	YJR107W	P47145	328 aa		5.02	□□□□□ -1.61
SRP21	YKL122C	GCV2	P49095	1034 aa		5.02	□□□□□ -1.61
SRP21	YKL122C	PLB1	P39105	664 aa		5.01	□□□□□ -1.61
SRP21	YKL122C	UBA2	P52488	636 aa		5.01	□□□□□ -1.61
SRP21	YKL122C	MSC2	Q03455	724 aa		5.01	□□□□□ -1.61
SRP21	YKL122C	MCM2	P29469	868 aa		5	□□□□□ -1.61
SRP21	YKL122C	SIP5	P40210	489 aa	Known RBP	5	□□□□□ -1.61
SRP21	YKL122C	FYV10	P40492	516 aa		5	□□□□□ -1.61
SRP21	YKL122C	YGR122W	P53272	402 aa		5	□□□□□ -1.61
SRP21	YKL122C	RGD1	P38339	666 aa		4.99	□□□□□ -1.61
SRP21	YKL122C	RPS26A	P39938	119 aa	Known RBP	4.99	□□□□□ -1.61
SRP21	YKL122C	RPS26B	P39939	119 aa	Known RBP	4.99	□□□□□ -1.61
SRP21	YKL122C	AIM39	Q08223	395 aa		4.99	□□□□□ -1.61
SRP21	YKL122C	HRR25	P29295	494 aa	Known RBP	4.98	□□□□□ -1.61
SRP21	YKL122C	SNM1	P40993	198 aa		4.98	□□□□□ -1.61
SRP21	YKL122C	SPR28	Q04921	423 aa		4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms