RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W GNT1Q12096 491 aa7.31□□□□□ -1.24
PRP40YKL012W PAN5P38787 379 aa7.3□□□□□ -1.24
PRP40YKL012W GIP2P40036 548 aa7.3□□□□□ -1.24
PRP40YKL012W SPO74P45819 413 aa7.3□□□□□ -1.24
PRP40YKL012W PTC5Q12511 572 aa7.3□□□□□ -1.24
PRP40YKL012W CDC11P32458 415 aa7.29□□□□□ -1.24
PRP40YKL012W GEM1P39722 662 aa7.29□□□□□ -1.24
PRP40YKL012W POL5P39985 1022 aaKnown RBP7.29□□□□□ -1.24
PRP40YKL012W GIC2Q06648 383 aa7.29□□□□□ -1.24
PRP40YKL012W LAP2Q10740 671 aa7.29□□□□□ -1.24
PRP40YKL012W SLP1Q12232 587 aa7.29□□□□□ -1.24
PRP40YKL012W SCT1P32784 759 aa7.28□□□□□ -1.24
PRP40YKL012W PEX6P33760 1030 aa7.28□□□□□ -1.24
PRP40YKL012W CEM1P39525 442 aa7.28□□□□□ -1.24
PRP40YKL012W YAR028WP39548 234 aa7.28□□□□□ -1.24
PRP40YKL012W TPO2P53283 614 aa7.28□□□□□ -1.24
PRP40YKL012W TFB2Q02939 513 aa7.28□□□□□ -1.24
PRP40YKL012W TOP3P13099 656 aa7.27□□□□□ -1.25
PRP40YKL012W VPS53P47061 822 aa7.27□□□□□ -1.25
PRP40YKL012W LCB5Q06147 687 aaKnown RBP7.27□□□□□ -1.25
PRP40YKL012W YLL054CQ12244 843 aa7.27□□□□□ -1.25
PRP40YKL012W NUG1P40010 520 aaKnown RBP7.26□□□□□ -1.25
PRP40YKL012W GUS1P46655 708 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
PRP40YKL012W TOM70P07213 617 aaKnown RBP7.25□□□□□ -1.25
PRP40YKL012W GIS4Q04233 774 aa7.25□□□□□ -1.25
PRP40YKL012W ATG13Q06628 738 aa7.25□□□□□ -1.25
PRP40YKL012W YDR306CQ06640 478 aa7.25□□□□□ -1.25
PRP40YKL012W PDC5P16467 563 aaKnown RBP7.25□□□□□ -1.25
PRP40YKL012W NAR1P23503 491 aaKnown RBP7.25□□□□□ -1.25
PRP40YKL012W KNS1P32350 737 aaPredicted RBP7.25□□□□□ -1.25
PRP40YKL012W YBR284WP38150 797 aa7.25□□□□□ -1.25
PRP40YKL012W HSE1P38753 452 aa7.25□□□□□ -1.25
PRP40YKL012W TED1P40533 473 aa7.25□□□□□ -1.25
PRP40YKL012W SPP382Q06411 708 aaPredicted RBP7.25□□□□□ -1.25
PRP40YKL012W AVO1Q08236 1176 aa7.25□□□□□ -1.25
PRP40YKL012W ALG6Q12001 544 aaKnown RBP7.25□□□□□ -1.25
PRP40YKL012W ELG1Q12050 791 aa7.25□□□□□ -1.25
PRP40YKL012W MDM12Q92328 271 aa7.25□□□□□ -1.25
PRP40YKL012W SAC7P17121 654 aa7.24□□□□□ -1.25
PRP40YKL012W DOM34P33309 386 aa7.24□□□□□ -1.25
PRP40YKL012W PAF1P38351 445 aa7.24□□□□□ -1.25
PRP40YKL012W SIT1P39980 628 aa7.24□□□□□ -1.25
PRP40YKL012W UBP6P43593 499 aaKnown RBP7.24□□□□□ -1.25
PRP40YKL012W YGR045CP53229 120 aa7.24□□□□□ -1.25
PRP40YKL012W YDR444WQ04093 687 aa7.24□□□□□ -1.25
PRP40YKL012W YPL260WQ08977 551 aa7.24□□□□□ -1.25
PRP40YKL012W AAR2P32357 355 aaPredicted RBP7.23□□□□□ -1.25
PRP40YKL012W PNT1P38969 423 aa7.23□□□□□ -1.25
PRP40YKL012W HLJ1P48353 224 aa7.23□□□□□ -1.25
PRP40YKL012W SRC1Q03707 834 aa7.23□□□□□ -1.25
PRP40YKL012W YMR074CQ04773 145 aa7.23□□□□□ -1.25
PRP40YKL012W ERS1P17261 260 aa7.23□□□□□ -1.25
PRP40YKL012W NFS1P25374 497 aa7.23□□□□□ -1.25
PRP40YKL012W MRC1P25588 1096 aa7.23□□□□□ -1.25
PRP40YKL012W MET22P32179 357 aa7.23□□□□□ -1.25
PRP40YKL012W PET10P36139 283 aa7.23□□□□□ -1.25
PRP40YKL012W QNS1P38795 714 aaKnown RBP7.23□□□□□ -1.25
PRP40YKL012W YIR007WP40566 764 aa7.23□□□□□ -1.25
PRP40YKL012W YNL193WP53870 558 aa7.23□□□□□ -1.25
PRP40YKL012W TY4B-PA0A0B7P3V8 1104 aa7.22□□□□□ -1.25
PRP40YKL012W YER152CP10356 443 aa7.22□□□□□ -1.25
PRP40YKL012W MSD1P15179 658 aaKnown RBP7.22□□□□□ -1.25
PRP40YKL012W MEF1P25039 761 aa7.22□□□□□ -1.25
PRP40YKL012W ACO2P39533 789 aa7.22□□□□□ -1.25
PRP40YKL012W TY4A-HQ6Q5P6 413 aa7.22□□□□□ -1.25
PRP40YKL012W GPM1P00950 247 aaKnown RBP7.21□□□□□ -1.25
PRP40YKL012W NOP2P40991 618 aaKnown RBP7.21□□□□□ -1.25
PRP40YKL012W PMT3P47190 753 aa7.21□□□□□ -1.25
PRP40YKL012W RSA3Q05942 220 aaKnown RBP7.21□□□□□ -1.25
PRP40YKL012W DUS3Q06053 668 aaKnown RBP7.21□□□□□ -1.25
PRP40YKL012W YOL057WQ08225 711 aa7.21□□□□□ -1.25
PRP40YKL012W YPR071WQ12346 211 aa7.21□□□□□ -1.25
PRP40YKL012W RPL11AP0C0W9 174 aaKnown RBP7.2□□□□□ -1.26
PRP40YKL012W YGR237CP50089 785 aa7.2□□□□□ -1.26
PRP40YKL012W RPL11BQ3E757 174 aaPredicted RBP7.2□□□□□ -1.26
PRP40YKL012W DBP2P24783 546 aaKnown RBP7.2□□□□□ -1.26
PRP40YKL012W KIP1P28742 1111 aa7.2□□□□□ -1.26
PRP40YKL012W MAE1P36013 669 aaKnown RBP7.2□□□□□ -1.26
PRP40YKL012W PGM2P37012 569 aaKnown RBP7.2□□□□□ -1.26
PRP40YKL012W FOL1P53848 824 aa7.2□□□□□ -1.26
PRP40YKL012W ELA1P53861 379 aaPredicted RBP7.2□□□□□ -1.26
PRP40YKL012W SPO21Q12411 609 aa7.2□□□□□ -1.26
PRP40YKL012W RET1P22276 1149 aaKnown RBP7.19□□□□□ -1.26
PRP40YKL012W PPH3P32345 308 aa7.19□□□□□ -1.26
PRP40YKL012W ALG14P38242 237 aa7.19□□□□□ -1.26
PRP40YKL012W ENP1P38333 483 aaKnown RBP7.19□□□□□ -1.26
PRP40YKL012W DSS1P39112 969 aa7.19□□□□□ -1.26
PRP40YKL012W RAD53P22216 821 aa7.18□□□□□ -1.26
PRP40YKL012W GSY1P23337 708 aa7.18□□□□□ -1.26
PRP40YKL012W GRX7P38068 203 aa7.18□□□□□ -1.26
PRP40YKL012W YLR001CQ07895 862 aa7.18□□□□□ -1.26
PRP40YKL012W THI73Q07904 523 aa7.18□□□□□ -1.26
PRP40YKL012W YOR223WQ12015 292 aa7.18□□□□□ -1.26
PRP40YKL012W ADE8P04161 214 aa7.18□□□□□ -1.26
PRP40YKL012W TPM2P40414 161 aa7.18□□□□□ -1.26
PRP40YKL012W ALG2P43636 503 aa7.18□□□□□ -1.26
PRP40YKL012W DSE4P53753 1117 aa7.18□□□□□ -1.26
PRP40YKL012W LCD1Q04377 747 aa7.18□□□□□ -1.26
PRP40YKL012W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
PRP40YKL012W VBA3P25594 458 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms