RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	ITC1	P53125	1264 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	RSC1	P53236	928 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	YNL034W	P53963	612 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	YNL018C	P53976	612 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	ERV41	Q04651	352 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	MFB1	Q04922	465 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	ACK1	Q07622	623 aa	Predicted RBP	4.03	□□□□□ -1.76
SOD1	YJR104C	ALE1	Q08548	619 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	PUS1	Q12211	544 aa	Known RBP	4.03	□□□□□ -1.76
SOD1	YJR104C	SFI1	Q12369	946 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	SEC39	Q12745	709 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	UBR2	Q07963	1872 aa		4.03	□□□□□ -1.77
SOD1	YJR104C	TRA1	P38811	3744 aa		4.03	□□□□□ -1.77
SOD1	YJR104C	RAD3	P06839	778 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	ARG82	P07250	355 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	RDS2	P19541	446 aa	Known RBP	4.02	□□□□□ -1.77
SOD1	YJR104C	RAD53	P22216	821 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	KIP2	P28743	706 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	PDR3	P33200	976 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	SLD2	P34252	453 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	UBX7	P38349	436 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	SOH1	P38633	127 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	YMR124W	P39523	943 aa	Known RBP	4.02	□□□□□ -1.77
SOD1	YJR104C	ICP55	P40051	511 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	CEP3	P40969	608 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	PAP2	P53632	584 aa	Known RBP	4.02	□□□□□ -1.77
SOD1	YJR104C	DNM1	P54861	757 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	UTP13	Q05946	817 aa	Known RBP	4.02	□□□□□ -1.77
SOD1	YJR104C	TOS4	Q06266	489 aa		4.02	□□□□□ -1.77
SOD1	YJR104C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
SOD1	YJR104C	IDI1	P15496	288 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	KAR3	P17119	729 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	CAD1	P24813	409 aa	Known RBP	4.01	□□□□□ -1.77
SOD1	YJR104C	VAC17	P25591	423 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	MCM2	P29469	868 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	TPD3	P31383	635 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	RRP14	P36080	434 aa	Known RBP	4.01	□□□□□ -1.77
SOD1	YJR104C	MIC60	P36112	540 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	RKM3	P38222	552 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	RTT107	P38850	1070 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	RIO2	P40160	425 aa	Known RBP	4.01	□□□□□ -1.77
SOD1	YJR104C	PXR1	P53335	271 aa	Predicted RBP	4.01	□□□□□ -1.77
SOD1	YJR104C	RPT4	P53549	437 aa	Known RBP	4.01	□□□□□ -1.77
SOD1	YJR104C	TLG1	Q03322	224 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	APL5	Q08951	932 aa	Known RBP	4.01	□□□□□ -1.77
SOD1	YJR104C	DPH6	Q12429	685 aa		4.01	□□□□□ -1.77
SOD1	YJR104C	URK1	P27515	501 aa		4	□□□□□ -1.77
SOD1	YJR104C	SYN8	P31377	255 aa		4	□□□□□ -1.77
SOD1	YJR104C	PBY1	P38254	753 aa		4	□□□□□ -1.77
SOD1	YJR104C	ARP1	P38696	384 aa		4	□□□□□ -1.77
SOD1	YJR104C	VAB2	P40003	282 aa		4	□□□□□ -1.77
SOD1	YJR104C	INP52	P50942	1183 aa		4	□□□□□ -1.77
SOD1	YJR104C	YGL140C	P53120	1219 aa		4	□□□□□ -1.77
SOD1	YJR104C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
SOD1	YJR104C	SML1	Q04964	104 aa		4	□□□□□ -1.77
SOD1	YJR104C	YPR084W	Q06821	456 aa		4	□□□□□ -1.77
SOD1	YJR104C	HAP4	P14064	554 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	POL3	P15436	1097 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	PHO87	P25360	923 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	GRX4	P32642	244 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	VRP1	P37370	817 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	RTR1	P40084	226 aa	Predicted RBP	3.99	□□□□□ -1.77
SOD1	YJR104C	NDC80	P40460	691 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	DSD1	P53095	428 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	SNU71	P53207	620 aa	Known RBP	3.99	□□□□□ -1.77
SOD1	YJR104C	ORC1	P54784	914 aa	Predicted RBP	3.99	□□□□□ -1.77
SOD1	YJR104C	YMR102C	Q03177	834 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	YDL144C	Q07589	356 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	CSF1	Q12150	2958 aa		3.99	□□□□□ -1.77
SOD1	YJR104C	MOD5	P07884	428 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	CYC8	P14922	966 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	SUI2	P20459	304 aa	Known RBP	3.98	□□□□□ -1.77
SOD1	YJR104C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
SOD1	YJR104C	RPC82	P32349	654 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	SCT1	P32784	759 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	RGT1	P32862	1170 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	POA1	P38218	177 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	FMP10	P40098	244 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	LYS14	P40971	790 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	YFL034W	P43564	1073 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	BIO5	P53744	561 aa	Known RBP	3.98	□□□□□ -1.77
SOD1	YJR104C	SYH1	Q02875	849 aa	Known RBP	3.98	□□□□□ -1.77
SOD1	YJR104C	EMI2	Q04409	500 aa	Known RBP	3.98	□□□□□ -1.77
SOD1	YJR104C	ISR1	Q06098	443 aa	Known RBP	3.98	□□□□□ -1.77
SOD1	YJR104C	EAF1	Q06337	982 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	HIF1	Q12373	385 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	YEL077C	Q3E7X8	1277 aa		3.98	□□□□□ -1.77
SOD1	YJR104C	TRP2	P00899	507 aa	Known RBP	3.97	□□□□□ -1.77
SOD1	YJR104C	KCC4	P25389	1037 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	MRC1	P25588	1096 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	MSH1	P25846	959 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	PSO2	P30620	661 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	EUG1	P32474	517 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	RPN12	P32496	274 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	APL2	P36000	726 aa	Predicted RBP	3.97	□□□□□ -1.77
SOD1	YJR104C	STB5	P38699	743 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	VPS41	P38959	992 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	NOC2	P39744	710 aa	Known RBP	3.97	□□□□□ -1.77
SOD1	YJR104C	HOS4	P40480	1083 aa		3.97	□□□□□ -1.77
SOD1	YJR104C	BDP1	P46678	594 aa		3.97	□□□□□ -1.77

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