RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W BUD27P43573 796 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RPB4YJL140W ALO1P54783 526 aaKnown RBP6.54□□□□□ -1.36
RPB4YJL140W CTR9P89105 1077 aa6.54□□□□□ -1.36
RPB4YJL140W RMT2Q03305 412 aa6.54□□□□□ -1.36
RPB4YJL140W BSC2Q05611 235 aa6.54□□□□□ -1.36
RPB4YJL140W NYV1Q12255 253 aa6.54□□□□□ -1.36
RPB4YJL140W MAC1P35192 417 aa6.53□□□□□ -1.36
RPB4YJL140W GRS1P38088 690 aaKnown RBP6.53□□□□□ -1.36
RPB4YJL140W PFF1P38244 976 aa6.53□□□□□ -1.36
RPB4YJL140W MDJ2P42834 146 aa6.53□□□□□ -1.36
RPB4YJL140W DSD1P53095 428 aa6.53□□□□□ -1.36
RPB4YJL140W FAR11P53917 953 aa6.53□□□□□ -1.36
RPB4YJL140W CTF4Q01454 927 aa6.53□□□□□ -1.36
RPB4YJL140W HAS1Q03532 505 aaKnown RBP6.53□□□□□ -1.36
RPB4YJL140W ELG1Q12050 791 aa6.53□□□□□ -1.36
RPB4YJL140W MNL2Q12205 849 aa6.53□□□□□ -1.36
RPB4YJL140W LPD1P09624 499 aaKnown RBP6.52□□□□□ -1.37
RPB4YJL140W SMY1P32364 656 aaKnown RBP6.52□□□□□ -1.37
RPB4YJL140W KAE1P36132 386 aa6.52□□□□□ -1.37
RPB4YJL140W MDG1P53885 366 aa6.52□□□□□ -1.37
RPB4YJL140W THS1P04801 734 aaKnown RBP6.51□□□□□ -1.37
RPB4YJL140W RPS9BP05755 195 aaKnown RBP6.51□□□□□ -1.37
RPB4YJL140W SAF1P38352 637 aa6.51□□□□□ -1.37
RPB4YJL140W PAP2P53632 584 aaKnown RBP6.51□□□□□ -1.37
RPB4YJL140W MSH6Q03834 1242 aa6.51□□□□□ -1.37
RPB4YJL140W REC8Q12188 680 aa6.51□□□□□ -1.37
RPB4YJL140W YLL054CQ12244 843 aa6.51□□□□□ -1.37
RPB4YJL140W PRS1P32895 427 aaKnown RBP6.5□□□□□ -1.37
RPB4YJL140W SER1P33330 395 aaKnown RBP6.5□□□□□ -1.37
RPB4YJL140W RIM11P38615 370 aa6.5□□□□□ -1.37
RPB4YJL140W NCE103P53615 221 aa6.5□□□□□ -1.37
RPB4YJL140W IRC3Q06683 689 aa6.5□□□□□ -1.37
RPB4YJL140W TOM1Q03280 3268 aa6.5□□□□□ -1.37
RPB4YJL140W CHS2P14180 963 aa6.49□□□□□ -1.37
RPB4YJL140W NPR1P22211 790 aa6.49□□□□□ -1.37
RPB4YJL140W RET1P22276 1149 aaKnown RBP6.49□□□□□ -1.37
RPB4YJL140W YHL008CP38750 627 aa6.49□□□□□ -1.37
RPB4YJL140W RAT1Q02792 1006 aaKnown RBP6.49□□□□□ -1.37
RPB4YJL140W AOS1Q06624 347 aa6.49□□□□□ -1.37
RPB4YJL140W FLP1P03870 423 aa6.48□□□□□ -1.37
RPB4YJL140W KCC4P25389 1037 aa6.48□□□□□ -1.37
RPB4YJL140W ICL1P28240 557 aaPredicted RBP6.48□□□□□ -1.37
RPB4YJL140W OMA1P36163 345 aa6.48□□□□□ -1.37
RPB4YJL140W AKL1P38080 1108 aaKnown RBP6.48□□□□□ -1.37
RPB4YJL140W YFR016CP43597 1233 aaKnown RBP6.48□□□□□ -1.37
RPB4YJL140W ERO1Q03103 563 aa6.48□□□□□ -1.37
RPB4YJL140W NUT2Q06213 157 aa6.48□□□□□ -1.37
RPB4YJL140W ALE1Q08548 619 aa6.48□□□□□ -1.37
RPB4YJL140W YLR122CQ12312 125 aa6.48□□□□□ -1.37
RPB4YJL140W SHC1P39000 512 aa6.47□□□□□ -1.37
RPB4YJL140W GCV1P48015 400 aa6.47□□□□□ -1.37
RPB4YJL140W SAM37P50110 327 aa6.47□□□□□ -1.37
RPB4YJL140W PMT7Q06644 662 aa6.47□□□□□ -1.37
RPB4YJL140W BDF2Q07442 638 aa6.47□□□□□ -1.37
RPB4YJL140W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPB4YJL140W MED7Q08278 222 aa6.47□□□□□ -1.37
RPB4YJL140W YIG1Q08956 461 aa6.47□□□□□ -1.37
RPB4YJL140W CMR1Q12510 522 aaKnown RBP6.47□□□□□ -1.37
RPB4YJL140W UTP10P42945 1769 aaKnown RBP6.46□□□□□ -1.37
RPB4YJL140W GLT1Q12680 2145 aaKnown RBP6.46□□□□□ -1.37
RPB4YJL140W ERS1P17261 260 aa6.46□□□□□ -1.38
RPB4YJL140W YKU70P32807 602 aa6.46□□□□□ -1.38
RPB4YJL140W YGL082WP53155 381 aa6.46□□□□□ -1.38
RPB4YJL140W DIB1Q06819 143 aaPredicted RBP6.46□□□□□ -1.38
RPB4YJL140W YOR223WQ12015 292 aa6.46□□□□□ -1.38
RPB4YJL140W GRX6Q12438 231 aa6.46□□□□□ -1.38
RPB4YJL140W FRT1Q99332 602 aa6.46□□□□□ -1.38
RPB4YJL140W HTS1P07263 546 aaKnown RBP6.45□□□□□ -1.38
RPB4YJL140W AKR1P39010 764 aa6.45□□□□□ -1.38
RPB4YJL140W DUS1P53759 423 aaKnown RBP6.45□□□□□ -1.38
RPB4YJL140W NOC3Q07896 663 aaPredicted RBP6.45□□□□□ -1.38
RPB4YJL140W SSP2Q08646 371 aa6.45□□□□□ -1.38
RPB4YJL140W NAM7P30771 971 aaKnown RBP6.44□□□□□ -1.38
RPB4YJL140W DUR3P33413 735 aa6.44□□□□□ -1.38
RPB4YJL140W SSF1P38789 453 aaPredicted RBP6.44□□□□□ -1.38
RPB4YJL140W STM1P39015 273 aaKnown RBP6.44□□□□□ -1.38
RPB4YJL140W RVS167P39743 482 aaKnown RBP6.44□□□□□ -1.38
RPB4YJL140W INP52P50942 1183 aa6.44□□□□□ -1.38
RPB4YJL140W NUT1P53114 1132 aa6.44□□□□□ -1.38
RPB4YJL140W YLR278CQ05854 1341 aa6.44□□□□□ -1.38
RPB4YJL140W CAF20P12962 161 aaKnown RBP6.43□□□□□ -1.38
RPB4YJL140W MSB1P21339 1137 aaKnown RBP6.43□□□□□ -1.38
RPB4YJL140W ETP1P38748 585 aaKnown RBP6.43□□□□□ -1.38
RPB4YJL140W CIC1P38779 376 aaKnown RBP6.43□□□□□ -1.38
RPB4YJL140W RRP46P53256 223 aaPredicted RBP6.43□□□□□ -1.38
RPB4YJL140W GIC2Q06648 383 aa6.43□□□□□ -1.38
RPB4YJL140W GPI13Q07830 1017 aa6.43□□□□□ -1.38
RPB4YJL140W YHL050CP38721 697 aa6.42□□□□□ -1.38
RPB4YJL140W YHR219WP38900 624 aa6.42□□□□□ -1.38
RPB4YJL140W SPO74P45819 413 aa6.42□□□□□ -1.38
RPB4YJL140W PMD1P32634 1753 aa6.41□□□□□ -1.38
RPB4YJL140W MSM1P22438 575 aa6.41□□□□□ -1.38
RPB4YJL140W GCD6P32501 712 aaKnown RBP6.41□□□□□ -1.38
RPB4YJL140W ARL1P38116 183 aaKnown RBP6.41□□□□□ -1.38
RPB4YJL140W YAF9P53930 226 aa6.41□□□□□ -1.38
RPB4YJL140W YCS4Q06156 1176 aa6.41□□□□□ -1.38
RPB4YJL140W YDL144CQ07589 356 aa6.41□□□□□ -1.38
RPB4YJL140W TRP3P00937 484 aa6.4□□□□□ -1.38
RPB4YJL140W PPX1P38698 397 aa6.4□□□□□ -1.38
RPB4YJL140W SHU2P38957 223 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms