RNA–Protein interactions for RNA: YJL048C

UBX6, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene UBX6, Length 1,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX6YJL048C MMR1Q06324 491 aa12.83□□□□□ -0.36
UBX6YJL048C BRE1Q07457 700 aaKnown RBP12.83□□□□□ -0.36
UBX6YJL048C RIF1P29539 1916 aa12.82□□□□□ -0.36
UBX6YJL048C MBR1P23493 339 aa12.82□□□□□ -0.36
UBX6YJL048C MDM1Q01846 1127 aa12.82□□□□□ -0.36
UBX6YJL048C CAN1P04817 590 aa12.81□□□□□ -0.36
UBX6YJL048C DRE2P36152 348 aa12.81□□□□□ -0.36
UBX6YJL048C IRC10Q08118 586 aa12.81□□□□□ -0.36
UBX6YJL048C CLF1Q12309 687 aaPredicted RBP12.81□□□□□ -0.36
UBX6YJL048C MAK31P23059 88 aa12.8□□□□□ -0.36
UBX6YJL048C MSS51P32335 436 aa12.8□□□□□ -0.36
UBX6YJL048C FMP27Q06179 2628 aa12.79□□□□□ -0.36
UBX6YJL048C IRA2P19158 3079 aa12.79□□□□□ -0.36
UBX6YJL048C SEN1Q00416 2231 aaKnown RBP12.79□□□□□ -0.36
UBX6YJL048C YLR455WQ06188 304 aa12.79□□□□□ -0.36
UBX6YJL048C GPI13Q07830 1017 aa12.79□□□□□ -0.36
UBX6YJL048C SGO1Q08490 590 aa12.79□□□□□ -0.36
UBX6YJL048C TVP38P36164 337 aa12.78□□□□□ -0.36
UBX6YJL048C MUK1Q02866 612 aa12.78□□□□□ -0.36
UBX6YJL048C WHI4Q07655 649 aaKnown RBP12.78□□□□□ -0.36
UBX6YJL048C CCH1P50077 2039 aa12.78□□□□□ -0.36
UBX6YJL048C CUP1-1P0CX80 61 aa12.77□□□□□ -0.37
UBX6YJL048C CUP1-2P0CX81 61 aa12.77□□□□□ -0.37
UBX6YJL048C APN2P38207 520 aa12.77□□□□□ -0.37
UBX6YJL048C RFS1P38234 210 aaKnown RBP12.77□□□□□ -0.37
UBX6YJL048C PAN5P38787 379 aa12.77□□□□□ -0.37
UBX6YJL048C PSP2P50109 593 aaKnown RBP12.77□□□□□ -0.37
UBX6YJL048C DSE3Q08729 430 aa12.77□□□□□ -0.37
UBX6YJL048C RME1P32338 300 aaKnown RBP12.76□□□□□ -0.37
UBX6YJL048C SSF2Q12153 453 aaPredicted RBP12.76□□□□□ -0.37
UBX6YJL048C YLR422WQ06409 1932 aa12.76□□□□□ -0.37
UBX6YJL048C HMF1P40037 129 aaKnown RBP12.75□□□□□ -0.37
UBX6YJL048C YFL052WP43551 465 aa12.75□□□□□ -0.37
UBX6YJL048C ARP6Q12509 438 aa12.75□□□□□ -0.37
UBX6YJL048C RPL8AP17076 256 aaKnown RBP12.74□□□□□ -0.37
UBX6YJL048C UBC1P21734 215 aaKnown RBP12.74□□□□□ -0.37
UBX6YJL048C RER2P35196 286 aa12.74□□□□□ -0.37
UBX6YJL048C UBP11P36026 717 aa12.74□□□□□ -0.37
UBX6YJL048C YEL025CP39991 1188 aa12.74□□□□□ -0.37
UBX6YJL048C YJL045WP47052 634 aa12.74□□□□□ -0.37
UBX6YJL048C PIG1Q06216 648 aa12.74□□□□□ -0.37
UBX6YJL048C VIP1Q06685 1146 aaKnown RBP12.74□□□□□ -0.37
UBX6YJL048C CDC16P09798 840 aa12.73□□□□□ -0.37
UBX6YJL048C GCV2P49095 1034 aa12.73□□□□□ -0.37
UBX6YJL048C ASE1P50275 885 aa12.73□□□□□ -0.37
UBX6YJL048C TFC6Q06339 672 aa12.73□□□□□ -0.37
UBX6YJL048C SPN1Q06505 410 aaPredicted RBP12.73□□□□□ -0.37
UBX6YJL048C OXR1Q08952 273 aa12.73□□□□□ -0.37
UBX6YJL048C IMG2P25642 146 aaPredicted RBP12.72□□□□□ -0.37
UBX6YJL048C ADK2P26364 225 aa12.72□□□□□ -0.37
UBX6YJL048C SKI2P35207 1287 aaKnown RBP RIP-Chip data12.72□□□□□ -0.37not detected
UBX6YJL048C APM2P38700 605 aa12.72□□□□□ -0.37
UBX6YJL048C CRG1P38892 291 aaRIP-Chip data12.72□□□□□ -0.37not detected
UBX6YJL048C BUD16P39988 312 aa12.72□□□□□ -0.37
UBX6YJL048C ECM16Q04217 1267 aaKnown RBP12.72□□□□□ -0.37
UBX6YJL048C BET2P20133 325 aa12.71□□□□□ -0.37
UBX6YJL048C SEC20P28791 383 aa12.71□□□□□ -0.37
UBX6YJL048C CLB5P30283 435 aa12.71□□□□□ -0.37
UBX6YJL048C MGA2P40578 1113 aa12.71□□□□□ -0.37
UBX6YJL048C COQ8P27697 501 aa12.7□□□□□ -0.38
UBX6YJL048C YKL097CP34245 136 aa12.7□□□□□ -0.38
UBX6YJL048C SUL1P38359 859 aa12.7□□□□□ -0.38
UBX6YJL048C TIF1P10081 395 aaKnown RBP12.69□□□□□ -0.38
UBX6YJL048C PWP2P25635 923 aaKnown RBP12.69□□□□□ -0.38
UBX6YJL048C KTR4P38131 464 aa12.69□□□□□ -0.38
UBX6YJL048C CCC2P38995 1004 aa12.69□□□□□ -0.38
UBX6YJL048C MAP2P38174 421 aaKnown RBP12.68□□□□□ -0.38
UBX6YJL048C RFC1P38630 861 aaKnown RBP12.68□□□□□ -0.38
UBX6YJL048C TPM2P40414 161 aa12.68□□□□□ -0.38
UBX6YJL048C YOR111WQ99210 232 aa12.68□□□□□ -0.38
UBX6YJL048C DID4P36108 232 aa12.67□□□□□ -0.38
UBX6YJL048C UBX7P38349 436 aa12.67□□□□□ -0.38
UBX6YJL048C HXT5P38695 592 aa12.67□□□□□ -0.38
UBX6YJL048C ARP1P38696 384 aa12.67□□□□□ -0.38
UBX6YJL048C HUL5P53119 910 aa12.67□□□□□ -0.38
UBX6YJL048C BIO5P53744 561 aaKnown RBP12.67□□□□□ -0.38
UBX6YJL048C ORC4P54791 529 aa12.67□□□□□ -0.38
UBX6YJL048C GDE1Q02979 1223 aa12.67□□□□□ -0.38
UBX6YJL048C RIM20Q12033 661 aa12.67□□□□□ -0.38
UBX6YJL048C MDR1P53258 950 aa12.66□□□□□ -0.38
UBX6YJL048C SNF1P06782 633 aaKnown RBP12.65□□□□□ -0.38
UBX6YJL048C SES1P07284 462 aaKnown RBP12.65□□□□□ -0.38
UBX6YJL048C RPL40AP0CH08 128 aaKnown RBP12.65□□□□□ -0.38
UBX6YJL048C RPL40BP0CH09 128 aaKnown RBP12.65□□□□□ -0.38
UBX6YJL048C YIR016WP40572 265 aa12.65□□□□□ -0.38
UBX6YJL048C SPP1Q03012 353 aa12.65□□□□□ -0.38
UBX6YJL048C ESS1P22696 170 aa12.64□□□□□ -0.39
UBX6YJL048C GCS1P35197 352 aa12.64□□□□□ -0.39
UBX6YJL048C MOB1P40484 314 aa12.64□□□□□ -0.39
UBX6YJL048C CRD1Q07560 283 aa12.64□□□□□ -0.39
UBX6YJL048C ISW1P38144 1129 aa12.63□□□□□ -0.39
UBX6YJL048C YHL026CP38740 315 aa12.63□□□□□ -0.39
UBX6YJL048C MAF1P41910 395 aa12.63□□□□□ -0.39
UBX6YJL048C ACF4P47129 309 aa12.63□□□□□ -0.39
UBX6YJL048C HCR1Q05775 265 aaKnown RBP12.63□□□□□ -0.39
UBX6YJL048C RRD2Q12461 358 aa12.63□□□□□ -0.39
UBX6YJL048C APE1P14904 514 aa12.62□□□□□ -0.39
UBX6YJL048C PEX1P24004 1043 aa12.62□□□□□ -0.39
UBX6YJL048C PUP3P25451 205 aaKnown RBP12.62□□□□□ -0.39
UBX6YJL048C MRPL7P36519 292 aa12.62□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms